Array 1 137674-135388 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJCU01000005.1 Escherichia albertii strain ZAI-5-1 sequence05, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 137673 29 100.0 32 ............................. CGCGTGGCGAACTCGATGGCGAGGACGGTTTC 137612 29 100.0 32 ............................. CTGATTTAGTGAACGTTATAGCAACGAGTTCT 137551 29 100.0 32 ............................. CCCTGCAATCGCTCGCACTCGCGGGGCGTAAG 137490 29 100.0 32 ............................. ACCTGCTCGCGATGCGTCTGCCGCTGGAACCC 137429 29 100.0 32 ............................. TGTATGGCACTGGCGCGTGGTGTGCGCTCAGA 137368 29 100.0 32 ............................. CCCTCTGTCGGCATTTTTTATAACGTTCATTG 137307 29 100.0 32 ............................. TATTTGCGTTCGGTGACGAGCGTAATAACTTC 137246 29 100.0 32 ............................. AACGGGCGCGCGTGTGGCCCGAATTCATTTGC 137185 29 100.0 32 ............................. CCATTTATTTTTATACCCGTATGATTTTTCAG 137124 29 100.0 32 ............................. GTTTTAAAATTGCGTTATTTCTACCTGGTGAG 137063 29 100.0 32 ............................. GCGAGGATGGTTTCACTGTCGGAACGGACGTG 137002 29 100.0 32 ............................. CCGCCCGCATTTTTTTGCGTCTGGAGCTGATC 136941 29 100.0 32 ............................. ACGGGATACGGGTACGATTACGAGCGCGATCA 136880 29 100.0 32 ............................. GAATGGGTTGTGGGGTTGAATACCGAGGCTAC 136819 29 100.0 32 ............................. CGAGGTTGATAAACTAGGTGATAGCTACGAAA 136758 29 100.0 32 ............................. CAAAATCTGCCGCGAGTGGTTTCACCCGACGG 136697 29 100.0 32 ............................. CTCCGCGACCGCATTTTATTTAGCAAAGATAA 136636 29 100.0 32 ............................. CCAGTGCAATTTTTAATGCAGTAAGCATGTTG 136575 29 100.0 32 ............................. AACCCCGACCACCTGCGAAACATACCGATGCA 136514 29 100.0 32 ............................. CTACAGGCTTTATCCGGCAATCCGTGTCTGGT 136453 29 100.0 32 ............................. GGTAAATATTCACGCGGCGAATTTTGATTCTG 136392 29 100.0 32 ............................. AAGACACGAAAGAGGGGGGGTACAACTTCCAG 136331 29 100.0 32 ............................. ACATTGGCAATAACCCCATTGTTATTCGTCTT 136270 29 100.0 32 ............................. GCCTGCCGAATGTCAAAATGGAAGTGTGGGGG 136209 29 100.0 32 ............................. CGGCGGCAGCGGCAACCAGCGCCGGTGCTGCA 136148 29 100.0 32 ............................. TTCCCATGGCGGCACCCTGTTTTATACCAGAT 136087 29 100.0 32 ............................. TCCGGGTGTCGAAAATATGGGGTTATGACGGC 136026 29 100.0 32 ............................. TGCGACCCCAGCCTTCTGCGTCCTTCCCGTTC 135965 29 100.0 32 ............................. CGCGCAGAAAGATCTGAACGAAAACAAATTCC 135904 29 100.0 32 ............................. ATTTTTGCAATTTTTGTGATGACCGGGAAACT 135843 29 100.0 32 ............................. GCGGTTTCGCCGGTTGTCGCGCCAGTGGTATC 135782 29 100.0 32 ............................. GCGGTTTCGCCGGTTGTCGCGCCAGTGGTATC 135721 29 100.0 32 ............................. CCGCCGTTAAACGCTGCTTATAAAGGAGAGAA 135660 29 100.0 32 ............................. AAATCCGGGGGCATATGGCTGTAGTGGTGTTA 135599 29 100.0 32 ............................. ACGCTGTTGAAGTTCCATCCGGTAATTCAGGC 135538 29 100.0 32 ............................. GCAGCACAATCATTGTCTGATGATCTGACGTC 135477 29 100.0 32 ............................. GCGACCCCGAAAAACAAGGTTCTCTGGCAGGA 135416 29 93.1 0 ............T........G....... | ========== ====== ====== ====== ============================= ================================ ================== 38 29 99.8 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCAGGTGAAATTGAACCGCCACAACCCGCGCCGGATATGTTACCCCCTGCAATTCCTGAACCTGAAACATTAGGCGATAGCGGTCACCGGGGGCGCGGTGGATGAGTATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTGGAAGTTCGCGCAGGTGTATATGTCGGAGATACGTCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCACTCAACTGGTCGGTTGTGGAAATGTGGTAATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACTTGGGGCGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAATGTTTGAATTTTGTTGGTTGATTGTTGATGTAGAATAAATTTGTTTAAAAACAGATATGTATGCTTAGT # Right flank : GGTTCGAAGACTATAAAACTGCGCTGATTGTTGTGTTCCCCACGCCCAACGGGGAATATCTGGCTTCTATTTTCAAACTCATCAAGACGCCTTTGCCAGTTCCTTCACCAGTGGCAGTATTATCCACATAACGTCACGGCAGCGACGTTCTATTCTTCCTGGAAGCGCCTTATCAATATGTTGTTGATTATCCAGCCTTACATCATGCCAGCTATTTCCCTTCGGGAACGCTGCTGTTTTTGCGCGTTGTTGATAGCCGTCTTTATTTCCAAGACTCCAGTTTGTCGCTTCAACGGAAAGTACAGCAATACCCGCTTTGTCGAAAACTTCTGCATCATTACAACATCCCGTGCCTTTCGGATAATTTTTATTCAGACCTGGATTTGTGGCGGCGGCAATTCCATGGCTGCGTGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCCGGGGTGTTTACGCCGCTATTGAAATACAGCTTATCGCCTACAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 164275-162905 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJCU01000005.1 Escherichia albertii strain ZAI-5-1 sequence05, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 164274 29 100.0 32 ............................. GTCAACATGGCCGTGTATTGCGCGCCGATGAT 164213 29 100.0 32 ............................. CCGCCGAACTACGTAAAACCTGTTTTCGGTCT 164152 29 100.0 32 ............................. GCTTTTCGCCTGTCCTTCGAATGATTTTTTGC 164091 29 100.0 32 ............................. TTATCTTCACTGGCTGTCGGGTCACTATTTGC 164030 29 100.0 32 ............................. ACACAGAACGACCAGACCGATAAAACCAATAC 163969 29 100.0 32 ............................. ACGGGGATTATAAAAAAGAGGATTATTTATTT 163908 29 100.0 32 ............................. CCTTTATCGGGGACTGATCACATTCGTCAGTC 163847 29 100.0 32 ............................. CGTGACGTCCATTCGATTATGTGGTTACTGAT 163786 29 100.0 32 ............................. ACACGGGCGCGAAAACAATCGAACGAGCTAAA 163725 29 100.0 32 ............................. CTGAAAACCTTGTTGACGCGCTATTCAGACAG 163664 29 100.0 32 ............................. CAAATCTCGGCCTCGACTACCAGAAAACTTAC 163603 29 100.0 32 ............................. GTTGTTGCAGTCGCTGGCTGAACACCTGCCAA 163542 29 100.0 32 ............................. AGGTTTCCCACCCTACACAGGTTGCACCAGAC 163481 29 100.0 32 ............................. TTCGCGCTGAGTCATATTGTTTTCTTTTCGGC 163420 29 100.0 32 ............................. ATACCGCGCTGGCACAGGTCGGCGCTATCGAC 163359 29 100.0 32 ............................. ATAGGAATAGCGCGGCGTTTTGTGAGCGTAGT 163298 29 100.0 32 ............................. TTTTTTCACGGATATGCGGGCGTACTGATTGA 163237 29 100.0 32 ............................. TCTATATCGGTGCATATATCCCCGACGAAAAA 163176 29 100.0 32 ............................. GGACGGGATAGTTGACTTCGGTGAGGGGTGCG 163115 29 100.0 32 ............................. CCACCGCTATTTTTTTGCGTCTGTTTCTGTCC 163054 29 93.1 32 ......T......C............... TTGCTTGAAGGTGAACTGGATCGGAAAACAAC 162993 29 96.6 31 .............C............... GACTCGCAATCGCCAGAAGACGCGATCAGTT 162933 28 89.7 0 .............C...........-..A | A [162931] ========== ====== ====== ====== ============================= ================================ ================== 23 29 99.1 32 GGGTTCCCCGCGTTAGCGGGGATAAACCG # Left flank : CTGGATGAGCTATTGGCAACGCTGACCGATGATAAACCACGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAACTGGCGTTTGTCGATGCAAACACATAAATATTTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAAACTTCCACTCATTTATATTCTTTGTCGCCTCTGAAATTCCTCCATTTTGCCTATCCTGGACTAATCATTGCCATTCTCTACAAATTCTGTGGCGTTAATTTTTCGTTGGAGTGAAAATTATTGCGGTAGAGTTTGGTGGATTTTAGTTTGTATAGAATCACTTTAAATATTTAACTTTTCACTCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTGTTTGTGTGATCCTGTAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA # Right flank : TTTAGGTATGTTCAGGCCGGGCAGTTTCCCGCCCGGTTTTCCTCATTTAGGCATTCGACCAGCTCTGGATTGAATCCGCATTCCCTAACTCACCATGCATCACTTCATACGATTTTTTCAGAATCACATCGGTGTGTTTGGTTAGGTCTTTGAAAATGCCCTTATTCATTGCGTCGTAGCGTTTGGCATTGCTCTCAACAGGCATAAAGACATCTTTCACGCGAACCATTTTGTCGACAGCCGTTGCGTAATCTGGGTATAACCCCAGTCCTACCGTCGTATTGATCGCCGCTCCCAGGCTTGCACAGCCGTTAATGGCGTTACGTCGTGCCGGAAGGTTGAACACATCGGCAAAAATCTGCATAAACAGATCGCTGTTCGAACCGCCGCCAGTAATGATTACATGCTTCGCAAAGTGATTCATTTCATTACACATATTGTCGTAATTATTCTTCAGCGTCAGCGCCACGCTTTCCAGAATCGAACGATAAATCCAAGCG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGGTTCCCCGCGTTAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGTGAGCGGGGATAAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //