Array 1 297565-296682 **** Predicted by CRISPRDetect 2.4 *** >NZ_VWVM01000001.1 Pantoea sp. B_8 Scaffold_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 297564 29 100.0 32 ............................. GCACATGTAAGCCCGCCGCGTGCGGGCTTTAA 297503 29 100.0 32 ............................. GTCTCGCAATGAGCAAATACACAGACTGTATA 297442 29 100.0 32 ............................. CTGACTCTTCATGGCTGGCTGATTCATGAAGC 297381 29 100.0 32 ............................. ACCTGTCTGATTTTGAGCGGGATATTAAGGGC 297320 29 100.0 32 ............................. AGTACTTCTTTCGCCCATCATTCACAGCGATG 297259 29 100.0 32 ............................. TTGGCGGCGACTGGATCGCAGATTGGGAGGCT 297198 29 100.0 32 ............................. TGCGCTGGTGCCTTTGACGCGATATCCGTCGG 297137 29 100.0 32 ............................. GCTTAACAGTCAGGCCGGTCAGGTACTGGCTG 297076 29 100.0 32 ............................. AACAATTCGAGAGGCTAGAGTGACGATACCCG 297015 29 100.0 32 ............................. GTTGAGCCCGTGTCCGGCTGACGCGGGATGCA 296954 29 100.0 32 ............................. GATTCAGCCTGCGCCTTGTCAGCGGAGAAGAA 296893 29 100.0 32 ............................. CGTGGCGCTACCCATGCCCGGGTAACGCCGGA 296832 29 100.0 32 ............................. GAGTATGTGGGCAGTGCCATTACGCTGACGCT 296771 29 100.0 32 ............................. GCGCAGAGCTAATAGAAATTGACACAGAACGA 296710 29 89.7 0 .......G.A..C................ | ========== ====== ====== ====== ============================= ================================ ================== 15 29 99.3 32 GTGTTCCCCGCGTGAGCGGGGATAAACCG # Left flank : CAGAGCGATCCGTACGCCTTTATCCGTAACGCCTACTTCCAGCGGCACGACTTCCTGGCGCGTGGCGGTAAACTCAAGCCGGAAGATAATCCTAACGCAGCCGCGATTCAGGATGACCTGAAGGATATCGATTCGCAGTAATGTTACGGTCCTTAAAAGGGCGCGTCACATACGTCGTTTTGATTTTATTGCTGACGTCTTACCCGGTCTGCTGTAAGACCGGGTAAGAACAGAGTTCAGGTTCAGGCTCTTCCTGATCGCCCGATTCTCGTCGTTCATGCTATGGAAAACTTTTCTCTTCTGCTTTTACTTCTGACTTAATTCGTAACGACCTTTCCTGTTTGGGGCTGTTATTAACCTTCTGCCTTCCTGAATAACAGTATTTTTTCGACAGATTTGGTGTCTGAGAATAACGGCTCATAGGGGCAGATCCGGATGTAAAATTCGGTAGAATTTTCTGGTGCGAAAAAACGCTTTGTAATCAGTCGGATAATTTTAGA # Right flank : CCGCGATAAACCTGTAATGAAAGAGTCCGGGAAAGGTGAGGGTAAATCTTCGCTATGCGAGCGTTGATTAACCATGGTGAAGAAAGACGTCGAAGAGTGAGAATTTCTGGAACTCCCGTACCTGCCGGGAAAAAGTCGAGGTTGGTCAGCTGTCTGAAGGCGACTCATCAGAGTCGCCTTTTTTAAACCCGTCCCTCGATCAGAACTTGTAGTTAAAGCTCGCACCATAGAGCCAGGCCTTGCCTTCAGAGGTAAAGGTATAAGGACCTTCTTTCACCGTTACTTTCTGCCCATGCATATAAGAGATACCCAAATCGACTGAGGCATCATCGTTAAAGGCGTAAGACGTACCCGCACTCAGCCATAAACGATCCTGGTCCGGAATAGAGATAGAACGCTTATCAGCCGGTACCGGGCTGTCATCAAACGCAATACCGGTACGGAAAATCCAGTTTTTGTCGTAGGAATAGGTTGTGCCCAGTGCAATGCGGTAAGCATCA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTGAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGTGAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 121037-119909 **** Predicted by CRISPRDetect 2.4 *** >NZ_VWVM01000010.1 Pantoea sp. B_8 Scaffold_10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 121036 29 86.2 32 A...........CC..............T CGTTCGAAGCGTTTGCTGCGCCCGGTTTAAAC 120975 29 100.0 32 ............................. GCCCGTCAACGCACTTCAAAAAAATAACCCCT 120914 29 100.0 32 ............................. GAATGCCTGTCAAATCAGCAGCCTGTTTTCTG 120853 29 100.0 32 ............................. CGCGATATGCCATTTGATGGTGTGGCTCACAA 120792 29 100.0 32 ............................. CGGTGAGCACACTAAACAGTGACGCAGAACCG 120731 29 100.0 32 ............................. GGATGGCAATACCTGGGCGCATTTCTCATCGA 120670 29 100.0 33 ............................. CGCATCCATCTGCGCACTGGCGGTGTTAATTGC 120608 29 100.0 32 ............................. CCGCCAGGGTGATGGCGGACAATCTGAGTGGC 120547 29 100.0 32 ............................. CTAACCGCTAAGAAGTGCAGAACACTCATAAC 120486 29 96.6 32 .................A........... GATGCCGTTCTGCGTGTTACTCCAAATGGAAA 120425 29 100.0 32 ............................. GCCCCGTTTGTTGTGTCCGGTTATTATGGCTA 120364 29 100.0 32 ............................. GGGCCCGGTTACGGCTGGGGTTAGGGTTTAAT 120303 29 100.0 32 ............................. TACCACGTCGAGCAGAACAAACAGGCAACCGC C [120298] 120241 29 100.0 32 ............................. GCGCTCACCAGCCACAGACGTGGGTCTTCTGA 120180 29 100.0 32 ............................. GGGCGATCAGTTCCTGATCCGCTCCGGGGCGA 120119 29 100.0 32 ............................. ATTTATTTTCGGAGTATCGGGTAACGGGGCAG 120058 29 100.0 32 ............................. GTATTTACTCGTATGAGCAATAAAAAATTGCA 119997 29 100.0 31 ............................. CTGTCTGCTTAGACTGCTTTGAGGTGCTATG 119937 29 72.4 0 T....T.....AC.........AT.G..A | ========== ====== ====== ====== ============================= ================================= ================== 19 29 97.6 32 GTGTTCCCCGCGTGAGCGGGGATAAACCG # Left flank : ATGCTGCGGCTCATGTGCCTCGACCTCTTATCGTAACGCGGCCTCGAAAAGCGGCTACCAAAAAGTACTAACATACGGCTCCTGCAGGGGCCGTTTTTAATGATGCCATCCGCACGCTCAAGCACGGAATATCGTTAGTCTGTTCATGGCATGCGTTAGTCTATTCATGGTAAGCAGGTTTTGTGACTGCCATAACGCACAAAATTCCAGCTAAAGCCGGCTACTTACCATGAATAGACGAACAATCGCCATGAATCACCTAACGAAAGGCTGCAGCTGCCAGTCTTTGCCTAACGTTCACCATGAATCACCTAACGTTATTCACCCGGCAGTAACTCAGGGCGGCGGGAATGGATCAGAAAGTAAACGCCGCCATCCTTTTTGACTTCCGAATATGTCAGATAGCCTATCTTCTCCAGGTTTTTCATCTCGTTGCGAACCGCTAAGTTTTGGGCGCTGATCCTGGAAGTCAGGTTAGACGCTCGAGCAGGCGCTCAAGG # Right flank : GTCTTTATCAGCACGCTATGACTGAAGCCCGGCTCTCCCCATGCTGTGCGGCATCAGCCTGAAATCAGAACTGGTAAGTCACACCCATCGCCACAATGTCGTCGTTGTTAATCGACAGCGCGTTGTCATCATCCAGCTGGTTGATTTTGTAATCCACGAAGGCGGACATATTTTTGTTGAAGTAGTAGGTTGCACCCACATCGATATACTTCACCAGATCCGCATCGCCGATACCGTTTTCGATATCCTTGCCCTTAGTCTGTACGTAGCCGATTGACGGACGCAGGCCGAAATCAAACTGATACTGCGCCACCAGCTCGATGTTCTGCGCTTTGTTGGCTGCGCCCGCGACGGCAGCGCCGGTATTACGGTTGGTACCGCTGATTGGCGTCATGTTGCGGGTATCGGTGTAAATCGCCGCCAGGTAAACGCTGTTGGCATCGTACTTCACGCCTGCGCCCCAGGAATCTGCACGGTCACCGCCGCCATAGGCGCGCGCC # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTGAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGTGAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 123786-123207 **** Predicted by CRISPRDetect 2.4 *** >NZ_VWVM01000010.1 Pantoea sp. B_8 Scaffold_10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 123785 29 100.0 32 ............................. CGCGCAGAACTGACGGCAGCTACACCAGAGGT 123724 29 100.0 32 ............................. CGCACTCCCCTATATCCCATGCCTACCGGGGA 123663 29 100.0 32 ............................. AGCGCATTGATCGCGAAATGGAGGCCATGATT 123602 29 96.6 33 ............................C GCTGGCACCAGCGGGTTTATCCGGCTCGTTGAG 123540 29 100.0 32 ............................. AGTTCATGCAGAAGGCATGGGAGCAGGAATCA 123479 29 100.0 32 ............................. CATTTGGGTGTGGACGTCAAAGATTGTCATAT 123418 29 100.0 32 ............................. CGAACCCGCCAGCCTAAAATTTCAGCACCAAC 123357 29 100.0 32 ............................. CCTATGCGTGGGCTTCCGAGATTGCGCTGGGC 123296 29 100.0 32 ............................. GCACCGACCATGAAACTCACCGAACCCTCGGC 123235 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 10 29 99.7 32 GTGTTCCCCGCGTGAGCGGGGATAAACCG # Left flank : AGATCTGGACCTTATACCGGCCAGTGATTTCGATGAGAAACCGGTGAAGCTGAGCGCCTGATAGGGTGTTTCAGAGGAAAAGGGCGAGTGGAAACACTCGCCCTTTTTTGATCAAAGTCTGGCTGGTTTGCTGTGAAAGCGAGTTTTCAGACGGATCCCGGTCAAAGTGGAAGGATGTTAACGTCAGTTTCTGACCATTCGTGCCGCGCAATTACGCACCTCATCTCTGAAATGGGCTCGTAGCCGCGCCAGCGCTCCTGGCGTTTATTTCGGGCGGCGGGATGTTTTCCTCGTCCTCCCTTCGCAATAAGCTTATGCATTACTGCAAGGTTCTCTTTGATAGGGTGTTGCCAGTACCCTCCAGGCTCCCATTGCGGACGCTTTTTTGCGCCAGATTTTTACCGGAAAATAAATGTGCATTTGGCTTAAGTCCGCAGGTAAAATTCGGTGGAATTATCAGATGTGAAAAAATGCTTTGTAATCAGGCTGATAATTTTAGG # Right flank : ATCGTGCAGAGTCATTGAGAATTAATTGCCATGACTGTCACGTTACTTTTTGCGAAAAAACTGGGTTGTACGCGACCTGAAAGGCAATACACTGGGCACCAATCCCATGCTAAACGTACTGCTTAAAAGCATCATTTAAGCCAGATTAAACCGACCGAAGCGAATTGATAATTTAAGGCTATTGATTGATTTCAAATGTTTGCCGATATTAGGCTATACGCGCGATACGGATAAATAATATGGATATGACGGATAAAGCTGTATTAGAGCCGATTGGCCTACAGGTGAAAGATGCAGTTAAGGAGATTCTTTTCCAGCATCTCACAAAGGATAAGACCGCCGTTGCTAATCGCTCAGTTCTGTTTATGGCTGGCTCACCTGCCGCTGGCAAAACTGAATTCATAAACAATGTGTTATTCGAAGGAAAGCAAACCAACTTTGTCAGAATAGATGCCGATGATTTTCGCTGGTGGTTCCCTTATTACAATGAAAAAAATTCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTGAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGTGAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 90112-89839 **** Predicted by CRISPRDetect 2.4 *** >NZ_VWVM01000015.1 Pantoea sp. B_8 Scaffold_15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 90111 29 93.1 32 ............TG............... CGCGGCGCAGCAGGCGTCGTCGTGGCGATCAT 90050 29 100.0 32 ............................. GCAAGCAATTTGCGGAATACCCTGCCCATGCA 89989 29 93.1 32 .....A..........T............ GTCAAGCAGGCAATCGCGTGGTCACGGCTCTA 89928 29 100.0 32 ............................. CGTATCGTTTCAATTGCAGTTGACCCATGCCG 89867 29 79.3 0 ..A.................A...C.GAA | ========== ====== ====== ====== ============================= ================================ ================== 5 29 93.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CCGAGAAAGAAGCGAAAGAGAAGGGCATCAGCTACGAGACCTCCACCTTCCCGTGGGCTGCCTCTGGCCGTGCTATCGCTTCAGATTGTGCAGACGGCATGACCAAGCTGATTTTCGACAAAGAGACGCACCGTGTTATCGGTGGCGCGATTGTCGGTACTAACGGCGGCGAGCTGTTAGGCGAAATCGGTCTGGCCATTGAGATGGGTTGTGATGCGGAAGATATTGCGCTGACCATCCACGCTCACCCGACCCTGCATGAGTCAGTAGGCCTTGCTGCAGAAATCTTCGAAGGTAGCATCACCGATCTGCCTAACGCGAAAGCGAAGAAGAAGTAAGTTTCTGCTGCTGCAAAGAGAAAGCTCCCGTTACGGGGGCTTTTTTTTGGTCTGGATTTGGTGTTGGATATTATGTGTGCATTTGGGATGATTCAGGGTGTAAAATCTGGTGAAATTTTAGGGTGTGTAAAAGCTTATATAAATCAAAGGGATGTTTTTAGA # Right flank : CAGACGTACATAGCGGGCCAGGACAAATAGCGAGCCACATCAATGAGGACCACGATATGAGATATCCGATTTACATTCACAGAACTGACACAGGAACTTATAGCGGATTTGTGCCGGACATTCAGGGCTGTTTTTTTGCTGGTGATACGTTTAACAAAACGATAGAGGATGCGGCTAGCGCTATAGATGCACACGTAGAGTTCACCGTTAATGAAGGTGGCCGTATACCCGTTGCGCGGACGTTCGAAATTTATGCAGATGATCCGGACTGTCAGGGCGGCACCTGGGCCTATATCGATGTCGATTTGAGCAAGTATGATGGCCGGTCTGTAAACTAAATATTACGTGTTCCCCGCGTCAGCGGTAAAAAGCTGATGAGCTGTTAAAAAACATGTCTCAGCGTAAGTATGTTCCCTGCTTCAGCAGGGAACATACTGGTAGTTTGCTACTTATGGTGTTTTTCAAAATCCGGCGTAATTTTAAAAATAAATACAAATCAA # Questionable array : NO Score: 5.63 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-6.30,-6.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [2-2] Score: 0/0.41 # AT richness analysis in flanks prediction: R [46.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //