Array 1 543605-543895 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWCY010000002.1 Clostridioides sp. ZZV14-6154 ZZV14-6154_143, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 543605 29 100.0 37 ............................. TATACAAATGAGGCTATTACAAGTGTTACAAATGCAA 543671 29 100.0 36 ............................. AAAGAAGTTGTTACAACTTTAAAAAATAATGGTACT 543736 29 100.0 37 ............................. AACGCTTTGTATTACACTTTTTATACCTTCCCATATC 543802 29 100.0 36 ............................. TAGAGGTACATCAGATAGTATGGCAGTGTTATTCGA 543867 29 86.2 0 .....................C.AA...T | ========== ====== ====== ====== ============================= ===================================== ================== 5 29 97.2 37 GTATTATATTAACTATGTGGTATGTAAAG # Left flank : GGAGGTACAAAGTCACTAGAAAACTTTCATCAAGAGTCCACAGATATTGAGGATTCTAAATCAAGTGATAATGTACAACAAGATGCCTAGTGAGATATTAAGAATTAAAGATGAATATACTTCTTTTTGTTTCGATGAAGCTTGTATGTTTTTAGTAGATGCTATAAAAAATGATAAAAAGCTTAAATTTGAAAAGAATGAAAAGAAAACTATAGCTAAAAATGAGAGAAAAACTTTTGTCCAAATAGCATTAGAGAAAAAGAAAAAAGTTAATAGGTAAAATATTCTAAATGAATAGAGTGAATTAATGTTAATTTATGATATAATGATAATATAGATATTTTGCAGTGTACGATTTTTTATATAAATTGGATGTAATCATTGAAAGTACTATGATATAAGCATATTTTGTGATATATCAAAAACACTACTGGTGACTCACTGCAATTTTAATATTGTTTTATATGTGTAAGGATTGAAAATGCTCAATTTATTTTGGG # Right flank : TTGAATAAACGCACAAAACACCTATTTAAACATATAGGTGTTTTTAGTGTGTTTAAAATATTTTTAAATAATTGGATAAATTTGCTAAATCAATAGACTAAATTATTAATTTTAGATAGAATTATATTTGAATAAATAATTTAATGAGGGAGATTATATTATGAAATTAACTAGAAAAATATTAGCTTTGACTATGATAGTATGTTTTTCTGTAATGATGTTTGTGACAGGATGTACTAGTGCACCAGCATCTAAAATGGAGGAAGTTGGTCAAGAAATACCAAAAGAAGAGGAAGAAGTACCAGAAGAAAGCATAGATAAAGATAAATTAAATCCAGATGAGTTTTTGGATTGTCAAATTAAAGAGTTTAAAGATGGTTGGCATGCATTAGCATATGTAGAAAAAAGTGTAAATAATGGTGAAATGCCCGAAAAAGGATTAAAAACAGTTGCTGATTTGTATGAAAAGCAGTTTAGTACTTTTAATGAAGAAATTGAAA # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTATATTAACTATGTGGTATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 217845-217304 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWCY010000003.1 Clostridioides sp. ZZV14-6154 ZZV14-6154_144, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================================================================= ================== 217844 29 100.0 38 ............................. CAAGAACTATAACAATGAAATGTCTTACTTTCTGTATA 217777 29 100.0 35 ............................. GAAATCGTGAATCAAATTGAAAAACAACAGAAAGA 217713 29 100.0 36 ............................. AATAAAATTTGGGTTTGGTTAGTAAGTACAGTTCAA 217648 29 100.0 39 ............................. TTACTTTTTGAGGTAGCGATTTTAAAGTATCTACTACTG 217580 29 100.0 36 ............................. CTTTTAATATTTTTCGTTATTCCTTCTAACAAATTT 217515 29 93.1 37 ...............A............T TTCTTATTTTCTCTATAGATTTTTATAGTTGTTCTCC 217449 29 93.1 89 A..............A............. AAAGGTACTCTTAATTCAATTTATAAGCAACTAGGGATTTTATATTAAGTAAATTCAACTATAACCAACTTGATTACAGTTGAATTTAT 217331 28 75.9 0 ......C......A....A.-..AA...C | ========== ====== ====== ====== ============================= ========================================================================================= ================== 8 29 95.3 44 GTTTTATATTAACTATGTGGTATGTAAAG # Left flank : AATCTGACCCATTGGAGAGAATCAAAAAGTTAAAAGAATTATTAGATATAGAGGCTATTACACAAGAAGAATTTGATGCTAAGAAAAAGGAACTATTGAATTTGTAAAACACAAGATTACCTAAATATAAACTAAAGGGTGCGTAAATTACACAAAGGATGTTATTTCTACTATAGTAGGAGATTTTTTATATTAACTATGTGGATTCAAAGATAAATAGAAAAAAAGAAGCACTTACTTTTTAGTATAATCCCTTTATAGTAGGTGCTTTTGTTTTATTTAAATTATTCTATTATTATTTGAAGTATCATTTTTATGGTATAATAAAAATAAGGAAGTTTTGCAGTGAGCGATATTTGTGACAAATTAAGGTTTAACAGTTGAAATGCAAAGCATTGAGAGTATGTGATAAGTATTATCAATTGCACTATTGCCCGCTAACTGCAAATTTAAGATAGTTGTATATATGTAAGTATTGAAAATGCTAAGTTTATTTTGAG # Right flank : TAAATAAACAAAGAAAGCACTTACTTTTGGTAAGTGCTTTTGTTTTGCCCAAATTGGTCGGTTGAGTAAAATAATTAGAAAAAATTGGATATATGATTGACTTTTGTCTGCCGAAACTATATAATATAATTAAGGCAGACAAAAGTGAGGTGAAGATATGCCAAGTAAAAAAATAGGTAGACCTACAGATAATCCTAAAGGCAGTAGAATAACTATAAGATTGGATGAAGAATCTAAAAATATTCTAGAGAAATACTGTGAAAAAGAAGATATAGACAAAGCCGAAGGAGTTAGAAGAGGTATAAAACTACTAAAAGACAAATAAAAAGTAGCCCAACCGCCGACCAAAGCAAAATGGACTACTTACACCAGAAGTTACCTTCTATGAAATATTTTATCATAGTAAGGTACTTCTTACAATAAAATTTCAAGGAGGATTTTACTATGAATGAATTAATGAATTTTGAAGGAAAAGAGATTGAAATATTTGAATATAATGG # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:-0.67, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGTATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //