Array 1 29662-30491 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000106.1 Scytonema sp. UIC 10036 c00174_NODE_17.., whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 29662 37 100.0 37 ..................................... TTGGTAAAGCCTCCATTCTGGTATATCAGGACTAAAG 29736 37 100.0 36 ..................................... TGAGCATAAGTAGAAGATGGAATGAGAGCTAAAAAA 29809 37 100.0 36 ..................................... AAAAGTTTATGAAGTTCCTTCAATGAGAGGACACAC 29882 37 100.0 34 ..................................... TTTTACGCAGATGGAAGCCCAGGTAGGGTAGTAG 29953 37 100.0 34 ..................................... AAACAGCGCAAAACGCCTAAAATGCTGCGACCGC 30024 37 100.0 36 ..................................... CGAAAAACTTGATTTTCGATAATTAACTGTTTACCC 30097 37 100.0 34 ..................................... ACCATCTTGGCACTTAGCAACTACGGGGATAGGC 30168 37 100.0 34 ..................................... TTGAATGCCTTGTCCGTAAGATTCACCACGGAGG 30239 37 100.0 34 ..................................... CTCACAATAGGGCGATACAAATGCAAAAACTGGG 30310 37 100.0 33 ..................................... GTTTTCGGGTGCTTTAGTAGCGGTTGCAGTTGG 30380 37 100.0 38 ..................................... AGCTCTAATTATCACGTCTTGACTGACTCTACCTGCTG 30455 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 12 37 100.0 35 GTTGCAACTTATACTAATCCCTATCAGGGATTGAAAC # Left flank : GAAGGTGAATCAGGCGCATATCAAAAACCCCTTCAAGCTTCTCATGCTGGAACAGTGTATATTGTCGCAGGGACATCTGGCTTTGCCGATGAAGTATCCCCCCATCCAGCAATGTATACTTCACTAAGCATTCCGGGATCGCTAGTGATAGATGCACACGGGAAGAGGCTTCATATCCAATTCGTTGATAACGAGGGCAACGTTAAGGACGAGTTTACAATGGTGAAAACCTGTTCTTTAATTCCAACTTAAGTTGTGAATTTCTTTATCAAATTCGCGGATGGGTAGCTGTAGGAAAAGAACTTGCTCAAGAAATGGCTGGATTCCTGTTGGCTTAGGGTTTGGAGGCGATCGTATAATCCGAACCATCCGCGCTCTTCACCCAGACTGGATTTCAGCCATTTTTACTCTACTCGATTTGAATTTTCCGTGCTATGATTAATCCATCCGCGATTCCGAACCACGAAAACTACATAGGGATAAATTTTCCAGAGCCAGCC # Right flank : CGGAATTAGCAAAACGCAATGTCGAAGCTTATATCGCCAACTCGAAAACGAAAGCTGTAATGGTGACAGGCTCAGTCGTAGAAGGGGTTGAATTTCAGTTTGCTCATGCGACGATCGCACAATGGGAAAAGGAAATTTCAACCATTTTGTCTGGGTCTGATATTCAATCTCCAATGATAAAAACGATGAGTGGAACATTGATTGGAATTCCATTGTACGGGCGAAACGTTGATTCAGAAGTGGAAAGCCAAAGCTGCAGATTATCTGGATGGACTGGCACAGAAGATGGTCGAGCATTACCTCAAGTTCTTCCCAATTTGGGGAATGTGGGAAAAGCTTGCTAGACGGGATACAAAGCTTTGGTATTATCAAATCCTCGTTGATTCAGCCTAGAATTTACTAGGTGTGTTATCTTGGTTGAACCGCTTGTATTACTCAGCATTTCAATTCAAGCGAATGAGCAGATTTATTGAGCAAATGGAGATTGCCCCTGAAAATCT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAACTTATACTAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : NA // Array 1 3866-5165 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000113.1 Scytonema sp. UIC 10036 c00185_NODE_18.., whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================ ================== 3866 36 100.0 41 .................................... CAAAAGGAGAGTAATGCGCCTCGCTGATTTTCACTCATCTC 3943 36 100.0 35 .................................... CGGCATAGCCGTCATAAACATCACACTCCCAATAC 4014 36 100.0 36 .................................... ACTAGACGATGAACGACTTGTCAGCGTGTTTGTAGT 4086 36 100.0 38 .................................... TTTAGTAGGCGTTATCTTAGGCGCAATGATAGAGCGAA 4160 36 100.0 36 .................................... TTACCCACACCATAAAATGCGGTTTTTTCGAGCAAG 4232 36 100.0 37 .................................... CGATCGCACTGGTAGTCAGAACCACGTCTTTTGGCTC 4305 36 100.0 36 .................................... TGGCTAATAGCCCAGGTCTGCCAATGTTGCGGCGAA 4377 36 100.0 39 .................................... CAGTAAAGTAAGTGAGAGATGCTGCCGTTACAAAGAGAA 4452 36 100.0 42 .................................... ACCATCTGACAACGATGAATGCAATGAGGAAATGGTGAGAGA 4530 36 100.0 40 .................................... TTGTTAAATCGCTGTCTACTTCTGTAGCGTTATTTTGTAA 4606 36 100.0 36 .................................... AAAACTGATTGATGCTTGGCAAATATCGCAAAAATT 4678 36 100.0 38 .................................... AATCATAGATGTAGCGAGTATGTATTCATCACCATCGT 4752 36 100.0 38 .................................... GCATATCTTTCCAGTTGGTAGTGACACCACAATCCTTA 4826 36 100.0 44 .................................... ACCGCTCACTTTAACTATCGCGTCAATAACGAGGTCGTTGCAGA 4906 36 100.0 39 .................................... GCATTCCAACTAGCACTCGCTGCTAGAGAGCAAGACCCT 4981 36 100.0 38 .................................... TCAAACTTAACTAATTCCATCATTATCTGGGTAATAGG 5055 36 94.4 39 ...................A...A............ CCGATCGCTCTTAGTTGCTCAATCACGGACTCCATAGCT 5130 36 77.8 0 ..T......T.........A.A.A.T..A.A..... | ========== ====== ====== ====== ==================================== ============================================ ================== 18 36 98.5 38 GTCCCTACTCGCTAGGGAACTTATTCGATTGGAAAC # Left flank : TTTTATCAGGAATAGACGATCTTCGCAATGGCGAAATGAATACAGTTGGTTCGCTGTTAGTTGCGATCGCAGCAACGCGCTTAACTGAAGCAGGTTTAGATATCCCAAAAGATTGTCTAGCCCCAGAGCCAGAATTAACCTTGTATGCTCGTCTTCAAGATGAACGGGATGATGCCTACCCCTACTACAATGCTTTGCTAAGGAGACTCAGTAGCTTTTGCGATGCACTTGAACTTACAATCAAAACTCCAAAATAGACACCTGTTGGGGCGTTGGTCCTCCTGTCACAGAGCTACCTGGTTCGATAATTGTCTAATTAGCGGCGAGGGGGTCGGTAAAAGTCTGAAATACTGATTCTTCCGTTGACCCCCTCGCCGCCTTATCTAGTAAGCGTTTCAGCAATTTTTATGATAGTTTTTTCTCCCTTTCTCGTGACAAATTCTGACCCCCTCGCAAACTGCCTCTGGACTCCTTACGGGGTAAGGGTCTAAACTAGAGGG # Right flank : CAGAAAACTCAAATTTTCTCCTCTTCTTCAAAATCAACCAAGTCTTGAGCAGTGCATTTTAAAGCGGTACAAAGCTTGGCTACTCTTGCTAACAATTCAATACCATTCCTATTATTTTCTAGGTTTCTAATAGTAGACTCGGTTACACCAATCAACTCAGCAAGCTGTTTCTGAGTTAGATTAGCTCGTTTTCGTAGTTCCGCAATTTTAGATACTAGCATTTAAGGTTGCTAAAAGATTCCACAGTAGTATCTTAGCGTTAATTTTTTAACGTTAAAATCTTGTCACCGTTAAAATCTTAACGGATAATAACCCCATGAGGAAAACAAAAACTACATCCTCATTAGGAGGTGAAACATTGACACAAGCAAATCACGAAGCTAGTCGTAATGGGAAAGGAGAACATTTGCCATCCGAGATCTACGAAAACTTAGCGCCAGTTGCTTTCCTTTGGCATCGGTCGAGACGAGCCGCAATAAACTGCTGTTTGATATTGGTGG # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCTACTCGCTAGGGAACTTATTCGATTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 19154-16963 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000127.1 Scytonema sp. UIC 10036 c00215_NODE_21.., whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 19153 36 100.0 35 .................................... ATAGTTTATTGCACAGTATTAACTTAAGCAATCGA 19082 36 100.0 36 .................................... GAAGAAAGAGGGTTTAGAGCGATCGCTGGTCCCCAT 19010 36 100.0 37 .................................... CAGCGATCGCGGAACTTTACGCGCACAACGTTGGCAA 18937 36 100.0 34 .................................... AAGTATTTGTGGAGCCTCAGTTGGGGATAGGATT 18867 36 100.0 36 .................................... GCTCTAGGGCAATTTGCCTCGGAACGAGGATGCGAC 18795 36 100.0 36 .................................... CCAAATAAACCCGTAGCTTTTAACGACGGGTCATTA 18723 36 100.0 36 .................................... GCATCTAACGCATTGCTTATGACTATGCCTTTGCCA 18651 36 100.0 36 .................................... AAAAACAAACAATTAAGATTAAGAATGTCAGAACGT 18579 36 100.0 37 .................................... ACTATGCCTTTGCCACTTCCTTGAATTCCAATTATTA 18506 36 100.0 35 .................................... GCGACTATCGAATCATTCACGGCAATTCCAGATAC 18435 36 100.0 35 .................................... CGATCGCAGTCCTCCACTGCCACTTGCGAATTAAT 18364 36 100.0 36 .................................... CAGACGAGGGGAAACTTAACCAACCAACTGTATTAT 18292 36 100.0 35 .................................... TTCGGTAATCAGGAGTGCGGGGGCGACACTTGAGA 18221 36 100.0 36 .................................... CGATCGGTGATTGGGAGGCGTACCCAAACTATATGC 18149 36 100.0 37 .................................... ATGCTTGGCTGTGGCTTGGTTACGCTACCAAGCAAAA 18076 36 100.0 36 .................................... AGATAATTCTGGAAATTAAGAGCGCTGACAAGAAAA 18004 36 100.0 36 .................................... ATTTCCTTGAAAGCATCAACAGAAGCTTGCAAGGGT 17932 36 100.0 37 .................................... TAAGGTCATTGACAATACAGAAAGGCATAGGACAAAC 17859 36 100.0 34 .................................... TATAATCGGGTTAACAGAAGGATCAAGACAAGGT 17789 36 100.0 37 .................................... ACAGATGCACCGTACACAGGATAATAGCAAGATATGG 17716 36 100.0 34 .................................... AAATGGGTCAAAAAGAATATGGTAAAGATATTGC 17646 36 100.0 35 .................................... AAGACCTAGATGCTGCAGTCGCTACTCTCAAATTT 17575 36 100.0 36 .................................... GAAATCGATACAACGGTTTTTTAGGGTTAATCGCTA 17503 36 100.0 38 .................................... GTATCCGCATCAAGCAAGGATCGGGATCGGGGTATCGT 17429 36 100.0 35 .................................... CTCAACAGCGATTAAATCCTATATTGGGCAGAACC 17358 36 100.0 35 .................................... GGAAGGAAAAGAATTCACCCTGAAAAGAAACCGTT 17287 36 100.0 36 .................................... GTGATGAAAAAGAGTATAAAGTCTGTGTTTCTTATT 17215 36 100.0 36 .................................... TGACTTCTTCAAAAGCACCTGTACGATACCAAATTC 17143 36 100.0 35 .................................... CCACCCATCACGGTCCGCACATCCTCAATAAGCCA 17072 36 100.0 38 .................................... GCATGGTAAGAATTGATATCTGTCGCTATTCCTGAATG 16998 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 31 36 100.0 36 CTGATTAAACCTTAGATACCGTAAGGTGTTGAGCAC # Left flank : TGGCGTAAAGCTTACAAATTGTTGGAGGGGTATGGGGAACGGATACAATATTCAATTTTTCGCTGCGTTATGAATCAACGCGATCGTGAAAAACTACGTTGGGAGTTGGAGACGATTCTGGCGAAGGAAGACTGTATTTTGTTTGTGCGTTTGAGCGATCGCTGCGTGCAAGATATACCCAAGTATAATCGACCAGGTACATGGGAAAATACAGATAAGCCTTTTTTGATTGTCTGAAAAATACAAGCATCTCTGTTTGTTGGGGTAATGAAAGTAGACGCGAGCGCTGAAATCCTTACCAAGACAAGATTTGAGAGATTTTTGAGGTTCTGTAGGTGCTTGCAAAATTTTCAAACTGCCTTATCTCAAGGGTTTTAGCTGGTGAAGTCAGGTTGGATTGGAAGGAGAATTGCGAAATTTCAGTTTTTTATTGGTTTTTTTGCAAGGTGCTTGTAAACTTGAGTTAGAGCGCTTGCTTGTTGAGCCTTTCAGCCTTCGCT # Right flank : GACTCAGCCGCCTAGAAACACTGTTTACCAACGTAGGCGAAAAAGTTCTAGAACATGATGCCACTATTGATGTACTGGTAGCAAACATCCAGGAATTAAGCGAAAACCTCAGAAATATAAGCGAACAGACCAACCGCAATATCAACAATTTGGCAGAGCAAGCAGCACAAGACAAGCAGCAAGCAGCAATTGACCGCCAAGCTTTTTGGGAACAGGCAGAGCGCGATCGGCAAGAATTCCGAACCAAGATTCGACAAATTTGGGAGTACTTGCGCGATCGCAATGGTGGCAGCAGTCTACCCCAATAAATAGCAAAAATTCCCTCCCAAAAAAATAAGGAGAGAACACACCGCAATGGTCTAAGCTCGGTAAGCATGGAAAGACTTGAAACTGTTGCCGATCGCCGAACCCATTGCCTTCATAAAAGTATTGCGAAGTCCCACAGCTACCGGGTTTTTCAATTCCCCCATTTTGCCGGATTGCCTTGATGCAAGGACGAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGATTAAACCTTAGATACCGTAAGGTGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.10,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 43571-42680 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000107.1 Scytonema sp. UIC 10036 c00175_NODE_17.., whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ======================================== ================== 43570 34 100.0 39 .................................. GGTGCCAATCATGGCGTGAAAATCATCTCCTAACCATTT GC [43553] 43495 33 97.1 33 ...........................-...... GATTTGAAAATAACGGGTTAGGCTAGCGGTTAG C [43480] 43428 34 100.0 40 .................................. GACTTTTTGAAAGCATTCTTCCCAGTTATGCTTTGAATCT GC [43411] 43352 34 100.0 30 .................................. GCCTGATGGTAGGTTCAGTTTCACCAGAGA 43288 34 94.1 36 TG................................ GTTTCTATAGGTATATAGACGATAGCGTAACTGCGT GC [43271] 43216 34 97.1 40 ..................G............... GTACGATTGCGTCATTTTATAGAACTCTTAAGGAGTCTCT C [43200] 43141 33 97.1 34 ..........-....................... GACGATATAGAAGCAACTTAAATTGATATATTCC C [43126] 43073 34 94.1 39 TG................................ GTAGCAGCTAAACTAAAGTTTTCAATTTGCATATTAGCT 43000 34 100.0 35 .................................. GGTAAGAAACTATTTGAATCAAATCGCTAATCAGA 42931 34 85.3 39 .............ACG...............TC. AGCTTATGCCTATCACAAACCTAAGAGCGCTTCTAGTTG 42858 34 100.0 39 .................................. GGACTACTCTAGGTCTGAGGGTGTTTCATTATTGGCTAG C [42843] 42784 33 94.1 35 ..........-......................G CTGCTGAAGATTTACTGCTAATCCTTTAGTTAAAC G [42767] 42715 34 100.0 0 .................................. | GC [42698] ========== ====== ====== ====== ================================== ======================================== ================== 13 34 96.8 37 GTTTCAGTCCCGTTACGGAATCGCTACGTTTCAA # Left flank : TATAAGTCCAGTCACCTTTTTCCGCTTCGCTTGTAGTAGATTACTAGAGAGATTTATTATGCTCTATCATTA # Right flank : GTCGCCATCTAAAACCTTACGAACAAGGATTCTACAAGCAGTTTTGGCAGATCGAAAAAATGACCACATTTCGCCTCGCTTATTGATAAAACTATCAATAGTACGAATATCAAAACGCTGTAACTATTAATTTGTCTAGGTTCTGGCTGTTTGGCAGAACCCCCAGGTTTTAGCCCTCGCTTTGATCTGCCAAACAAAAGACTACTAACAACTATATAATAATTGCTTCTTGTTGTCGAGCTTTTCCGAACCATGAGGTAATAGTTCGCTTCACTGCACCTGCATCAAGTACGTACACCCGCACTGAATCTTCCTCTGGTTTGATTAACTTTTCAATCTTGATTTGCATCTCGGTAAATTTTACCGCAGTTAAAAAACATTCAAACACACTGTATTGCGTCCAATTTCCATAACCACTCACATTTTGGTAACCGATTTCGACGCTTGTTTTGCCGCTTTTTGTCGGGTAAATCGTAAATAATCAAATAAAATAGTGTTGT # Questionable array : NO Score: 2.87 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.77, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGTCCCGTTACGGAATCGCTACGTTTCAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.94%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.10,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [23-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 1 12061-13964 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000130.1 Scytonema sp. UIC 10036 c00222_NODE_22.., whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================== ================== 12061 37 100.0 41 ..................................... ATAATTATATTTTAGCTCACCGCTAATACCAAAATCACTTG 12139 37 100.0 43 ..................................... CCTGTGGATTTACCTGGTCTGGAAGAAGCGTAGCACTCCAAGA 12219 37 100.0 40 ..................................... AACTAACTCTTTCTCATATTTGGCCATTTTTCTTCCCAGA 12296 37 100.0 37 ..................................... CCTACTCCGCCTGTTGCTGAACCAATCTCTAGTCCGC 12370 37 100.0 41 ..................................... CTAGCGGTTTTCAAAACGCTAAGAAGCGTTTGATCCACTGA 12448 37 100.0 42 ..................................... GCTTGACTACCGTCTCCAGGAACGGCTCTAGCAGCGATGCCA 12527 37 100.0 43 ..................................... TCCAGTTACAGCTTCAAACTGAAAGCGGGGTTAAATACCCCGC 12607 37 100.0 37 ..................................... ACTCCTGGTTCCTACTCGGAACTTTCTGGCTTTCTCG 12681 37 100.0 44 ..................................... CCCCATTTTACTATAGAACCTATGCTGATGCCTAACACATAGGC 12762 37 100.0 40 ..................................... TTTGTGCCTCAATTTTGTTGGCCTTTTCATTTATTTCTTC 12839 37 100.0 37 ..................................... CCGTGCGAGGGTAAGTTTTTAATATTAACATTTTTAA 12913 37 100.0 42 ..................................... TCCTTCGCCGCGTTCAGACGAGTTAGAGTTCCTTTGTGAGAG 12992 37 100.0 39 ..................................... ACTTTGTTGCCAACACCAATGTCTATTATCCGACCTTCT 13068 37 100.0 43 ..................................... CTTCCAATAAACCATCACTGTAGTGAAGATCTCTTCGATACTC 13148 37 100.0 40 ..................................... GAAGAGTTTCTCAAGAGTCAGAAACAAGAACTAATCCAAA 13225 37 100.0 40 ..................................... TTCAAGCTGTTCACAAACTTTCTCTCCAAAAAATCAATTA 13302 37 100.0 44 ..................................... CCTAAATCCTCTTGCTCTTCTTCAAAAAGCTGTGAGTAGAATAG 13383 37 100.0 43 ..................................... AATTAGGGCAGCAGTGGTTAGAGCAGCCTTAAATTTGTTTAGC 13463 37 100.0 40 ..................................... AAAGGATTTGCAAGAATTAGGTTAATTGTTTCTTGGGAAA 13540 37 100.0 46 ..................................... TCGAGGTCGGAAACCGCTTCAAGAAGTAAAGCTCCAGAGCTCGCAA 13623 37 100.0 37 ..................................... TCAGTTTTATAAAAACACACGGGTACGCCTTATGGTT 13697 37 100.0 39 ..................................... GAGAAAGCTCTCCCGGCTCATCTACAACTTCAATGATTG 13773 37 100.0 39 ..................................... ATCTAATACCAGTTCCCTATCTGAAGTGATGTGGCCGTA 13849 37 100.0 42 ..................................... AGAAATATCCAAATCCTACCCCAATTAATAATCCTCCAAACA 13928 37 97.3 0 ...............................A..... | ========== ====== ====== ====== ===================================== ============================================== ================== 25 37 99.9 41 GTTCTAGTCCACACTTACCCCGCAAGGGGACGGAAAC # Left flank : TTTAGAAGACAACACCTTGGCTTACCATCTCCAAAAGCGTTGGCTACCAATACTCAAGCTGAGTGAAGACAATCTCAGAATTTATCCACTGGATGCCACTGCAAAACAACAGACGCGGGTGTATGGCAGTGAACCACCTTACGAACCGCCTGATTGTGTAATTGTGTAAACACCTTTTTACAAGGAAAAGAGCAGTGTAAAGGCTGAAATAGTCTTTACACAAGCTTATCGAGAATTGTAAAGGAATGTAAATCTGGCAATGAAAACGACGCAGCAAGATTCAGGGAGTCTTGAAAAGCAATATTTTGTAAGCAAGAGATAATTAGATTTTTCTGGGTTGACTTCTTGGAGTTTTGCGGTAATATTAAATATAGGGCTAATATTTAGCGTCAAATGATTTTAAAAATCTGTACTGAGCAGTTAAATAACGTGACTCTTTGCGTACCTTGGCGCAACTGCACCTTGAAAACAAAATACAGTAAGAGTTTCCAAGGGCTAGG # Right flank : CAACAGGTTTTGCCGCCAGATCGATCGGGAGTCAATTGTACATTTAAAAAAAAGTTCTATAGTTTTAAAAAAAGACCTTTAGTTTAAAAAAAAGTGTTTTAGTAACTGGCATAGACAAAAAGGGCAAACAGTGACAGCCTCTGTTAGCACAGCCAAACTCTTGTGTAACACTAAAGAACTTTTGGTTCTTGCGTAATTAGCGTGCTAAATTTTTTGAAAAATAAGCTTGAAATCTTTATGGGGCTTCTATTACAGCCATTATTGACTGCAATGAACGTATTCGGGTTGAAATGCCCGACTATAAGTGCCTGTAAGCCTTGATTTTAAAGGAAAGTTATCGACTGTAATCATAAAGTACGCACGCGCTTTGTACGACAGAACCGATTTTTCTGCAACTAACTGCTTTAAGATTGCTATTGACATGAATAACAAACAACAAACGCTCTAGCTCAGTGGTATCGATTGATGAAGCAAAGTAAGTTTGCCTCATTTGTGGAACT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTAGTCCACACTTACCCCGCAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.70,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.64 Confidence: LOW] # Array family : NA // Array 1 10703-11397 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000155.1 Scytonema sp. UIC 10036 c00259_NODE_25.., whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 10703 36 100.0 39 .................................... TGAACGGGCATCGCCATGTTCGGCCCCAGCAGCTCTATC 10778 36 100.0 36 .................................... CCTCTGAAAGGTTCTAGCTCTGATGGCTGCGGTGGA 10850 36 100.0 35 .................................... GATGGGAAGATGTTTGAAACAATTTCTGTAATTTT 10921 36 100.0 36 .................................... GATGTTAAAGAATCTGCAGGCGCGTCAGAACCTTGT 10993 36 100.0 42 .................................... TTTCCCTAGGCTTACATAGTAGTTACCCTCTATTCCGCCGTA 11071 36 100.0 37 .................................... GAGCAGTTGCACCCGCAAGTACCTCCACCTCCGCTTC 11144 36 100.0 36 .................................... CCTATGGTGAAAACACCGAATACCAACCAAGCAGAA 11216 36 100.0 35 .................................... CATAGAGCTTCCGGATGGATAAAGCGTCCAATTGG 11287 36 100.0 39 .................................... TCCCACATGAAGCGCCCGGACTGGGTTTCAGCAAGGTTT 11362 36 97.2 0 ...............................A.... | ========== ====== ====== ====== ==================================== ========================================== ================== 10 36 99.7 37 CTTTACAAATCCCTCGCCCCGCAAGGGGATGGAAAC # Left flank : GCCAGTCAAGTTATCCGAGTCGCTGGAGAAGAAATTCACGAATAAGCAATCCACACACGCGGGAACTGGCGCTGGAGCCAGACCTTGGGATCTAAGTTGCAAGATGGCATCCTCTTTCCAGGAAGCGTACTTTGAGGCTGTGTGTACACTACCTCGCGAGAACCTTGGGCGGGCTTTCCCGACCCCGCGCCCCTCTATCCAAATCTCAATCATAAAAAAAATGGCACATCTGTACTAGGAATTTTATTACGTTTTTGTTACATTGTTGACAACCTTAAGTAATGCGTTATACACTCCAGCTAGTGTTGTTGAAGTTCATCGACACACCTCGCCCGATCCTTGAAAACCGCATAACTTCGTTAAGGTGTGTCGATTGCTTACGCTGTAAGGCTTTCGGGCTGCAAAAATTGATGCTTTTTGAAATTTTTTAACCATTTTCAAGAGGTGTGTCGATTAGGGGGTCTGAAACTCGCTCACAGCAAGGGTTCCAGAAGTGAACT # Right flank : CAGATGACTTGGAAAAGACCGTCTAAATTTAAACGGTCTTTTGAATTCATATCAACACTTACCCATAACACAGGTATACTATTGGTGAGTGTTGATATGCACGCTCATTCGCGATCGCCCATCAACCGTTCAACAATCTAAATTCTTTTTTCTCCTCATCCAGCCATTCGGCTAGTCCGTCAACGCATAACTCATCAACCCACTTTCTAATCTGTTCTGATGGGATTTTCTTGCCGTTAAAAGACTTTTGAGCTAAATCTCTAACTGTTGCTTGCCGAATTTCCTTGGATTGCAACCAGCCTAAAAAACCCGTGTAGGTATCTGAAAACTTAGCCCCTTCAAGCGCTTTCTGCTCTGATCCCTCCTCATCCTCTACCGATTCCTCAATATAAGGTTTGGGTGGATTGAGCATCTTGGAAATGTCAGATTGAGCATCTAGTTCGATAGACCATCGGGCGACTTCCGTATTTTGCTGAATCTGGATATCTTCAAGTTCAAAT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTACAAATCCCTCGCCCCGCAAGGGGATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.90,-10.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.64 Confidence: LOW] # Array family : NA // Array 2 24669-25376 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000155.1 Scytonema sp. UIC 10036 c00259_NODE_25.., whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 24669 37 100.0 36 ..................................... CCTACCGACATAGACGACCTAGATAATATGCTTTTT 24742 37 100.0 42 ..................................... AAGTTAATAACAAGCGATGGCAGAACTGGGAGCGACTTGAGT 24821 37 100.0 35 ..................................... GCGATCTGTTAAAGTACGTTATGACAAAATTGATG 24893 37 100.0 38 ..................................... TAGTGGAGCTTTGAGTATTGTTTCACGTTTATATTATT 24968 37 100.0 35 ..................................... ACTTCCAAATCAGTATTAACTTTTATTTTACTTTG 25040 37 100.0 36 ..................................... AATCTATCGTTATCAGTCGGCTCTTTTTTATAAACT 25113 37 100.0 39 ..................................... TTCATGTGCTTTATTTCTACCTTGTGCCCATCTTGCCGA 25189 37 100.0 39 ..................................... AGTGTTAAGCGCTTAACAGTCCTCCTATAGTAGCTGGAG 25265 37 100.0 38 ..................................... TGGTATAACTTTAATTTGTTGAGAAACGCAGGCGTAAC 25340 37 83.8 0 .......C.GTT......T....G............. | ========== ====== ====== ====== ===================================== ========================================== ================== 10 37 98.4 38 GTTTCACTTACCTAACGCCCCGCAAGGGGATTGAAAC # Left flank : TTACTACAATTTATCGAGAAATACTGCTTCAAAGGCAGACACAAACCCAGCCATTGACCGAGAAGGAAGAAGCAGAGCTTTTGAACACAGCTGATAACTTAAGAGCGATCGCCCAACAAACTGCAACTGAAGACCTGCCCCTACCCTCAACCCTGGACAAAATCATCAATGCATTGTCCGAAAAGACTGTTTAAATTTAAACACTCTTTAATGTGTTTATCATTAAAAAAAACGTGTGGTTAAGTTGTTTGGTGGGCGATCGCCTTCAGTAAAATGCTGGACAAAATGAAATCAACATTTTATACTTAATTTTGGCGAACCGAAGCACGGGCGAAAACCCTAGGGGGTCTGCCAAAAGCCCAGAACCTTGACAACATAATAGTTTTAGGGTTTCAACTAGGCATGAAGAGCAAGTTGTCAACGGCTGAAATCGACTTTTGAAAGAGCTTTGCCAAAATGAAGCGTAGAACTCTTGTGAAAAGGTCATTCCAAGCCCAAGG # Right flank : CTAAGCCACTGTTCTAGCGATCGCATAAACAACAAAGCCCACCAACGGCAGTGGGCTTTTTGATGTCGCAGTACTTTAATCTTACGGGACTTATATAGTACTTTTGTTCTGGCTCAATGAAACGTTAATTTAGGGGGTAGAGCAAGCTTTTGATGACTGCATCTTGCTGGCGGGGTTTGGCGATACAGGAACAGGGGAAGAGGCGATCGCAAAGTATAGTAAATCTGTCTTCAAGAAAATCTTTGAGCGCTACTCTCCCGATCTACTCAGCAGGTTCTGGTGGTAAACCCAGCTTGGCGCGAAATTCCTCGCTGTACTTTGCTTTCTCCCAATTGTTGGCAGATTTGACTTGCTCAGGAGCTAGATTTTTGGCATAGCTGATAGGCATAGCTAGGTAGGCACCTCGAGGTTGGCACTTCGAGGTTGGCACGGCTGAGGTTGGCACGGCTGAGGTTGGCACGGCTGAGGTTGCACGGCTGAGGTTGGCATAACTGAGGTTG # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:0, 3:3, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCACTTACCTAACGCCCCGCAAGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.90,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : NA // Array 3 27098-27662 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000155.1 Scytonema sp. UIC 10036 c00259_NODE_25.., whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================== ================== 27098 36 100.0 43 .................................... GGCCTAAAGATGTGTTAACTTTATTCGCTTGTGGACACAAGTA 27177 36 100.0 35 .................................... AATGCGAATAGCGTTGTTTGACCAGTTGCCAAAGA 27248 36 100.0 43 .................................... CTTTTGCATTGTGTTAACGCTCGTCACATTTTTTGCCGTGACG 27327 36 100.0 39 .................................... TTTATACCTCCTGTTTGTAAACAGGCATCATACACACTT 27402 36 100.0 38 .................................... CTTGTGGACACAAGTAAATAGAACTTACTTGCGTTTAG 27476 36 100.0 37 .................................... AATCAGGAGTCTCGGGGTTTTCTTCGGCAGGAGTCCC 27549 36 100.0 43 .................................... CCGTTTCTCCAGAACATGGTGTCTCCGTTTGTTCCGTCGTCAT 27628 35 77.8 0 ...-...........C............AGAA.G.A | ========== ====== ====== ====== ==================================== =========================================== ================== 8 36 97.2 40 CCCTACCGATTGGGTTAAATCGGATTAGTTGGAAAC # Left flank : TTTGAGTCTTTTCCGATACCAGTCCACCCACCAACACCCCTAAAGGGATACAGTTTTGCAAAAGCTGCGATCGCTCCAAGCAAGGCAGCTAAGGTAGCAATTCGTATCAATAGCTTTCGCCTAAAAGACAAGAATTCGCCAAAATTAGCGGATATATCGCGCCATGCACCCATAAATCACCCCAAACAACCCTCTACATCATTATTAGTGGTAAGCGCAAAGAACTTATGCATTGAAAGTCAAGTTTTGCTGACAAAGCCAAAATCTCAAAAAGTGCCAGTGGTCAGTTGGGATGCGATCGCACTCTCAGAATTATCCATCGACACCACTTGCCAAATCGTCTCAACCCTATATTTTTCGTTGAGTGGTGTCGATTGCTTGCTGTACAAGGGTTTGAGGTATGTGTTTTGTGCGATTTCTGGGAGGATGTACTATACTTTTAACAGTGGTGTCGATTTGGCGGCTGAAACCTTTACTGGGTAAGGTCTCCTAGACGAACT # Right flank : AGCCCTGTGCAATGTAACTGTATTGCACAGGGCTTAATGGTTTGTTATGGTGAGTGCAAGGAATGGGGTGCGGTCATCTGAGATGGTAGGCAGCGCTTATCGCTGTGTTATGCAGCTTTCTTGGTTCTCTTCTTGAGCTGTTTAGCCTGTGGGTCAAGCCTCAGAAACTAACCCTATAGTACTTTTGAACTGAACTGTCATTGCAAATGCTGGATGAACCTTGTTGTCATCATTTCTTCTCCCAACTCCAGTTAATTTGCTTGAAGCGCTCAGCATTATGCTTGGTATACCTGACAGTGTGCTGGATGTTCTTGTGACCTAAGAACTCTTGGATGTCCCTGGTAGTCATCCCCTGACTGGCTAAGAAGTAGCCGCAGCTATGACGCATCATGTGACTGTGAATCTTAATTCCCAGGTTAGCGACTTCACCAGCTCGTTCAAAGATTTTAGCGATCGCGTCCAATGTCATTTGCTCTGCGGCGTCGTTCGGTAGTTTCTTC # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCTACCGATTGGGTTAAATCGGATTAGTTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.30,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 104-288 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000135.1 Scytonema sp. UIC 10036 c00229_NODE_22.., whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 104 37 100.0 36 ..................................... TCGAGAATACCAGTACAAATATGCCGCAATCTATTG 177 37 100.0 38 ..................................... GGTATTGTATCCGTCATGAGCAATTATCCTACCTGACA 252 37 97.3 0 ...........................A......... | ========== ====== ====== ====== ===================================== ====================================== ================== 3 37 99.1 38 CTTTCAAATAAATGAAACCTGCTTGCGGGATTGAAAC # Left flank : CCCCAACTCTCGCCCGAGCCCCCAACTCACTACCAGCAATTTATTTACACGCTCTTGCGGGATTTACACTTGAAGCCTTTATTGGAGAGAGTAGGAGTACCCTC # Right flank : CGTTGCTATTGTCGCTTACCTGTTATGCAATTTGAATTACTTTCAAATGTAACTCCTACACGGACTGCCATAGCAGTATAATTATGCAATAGATTGAAAGGGGGAATTTTATAAAACACAAGATGTATGGATTACATTTTAAGAATCTTCAATATTCTTACATATTTTGGCAAGTTTTCCATAAAAACAAATTTCACTTGCAGTGGGAGACAATTTTGTTTGCTTAGGTGTTTTGGAACTAGAAAATTGTTCCATCAACCATAGTCCTCCACTGATAATGCTAACAATTGTAATTACAGCCAAGTATGTATTGCGTATTTGCTTCCAGTTGAAGGGGACTCGGCGCACCAAATACTCAGATGAACTACCAATAATGTAATAAGATGATTTACCTGTTGGTTGCACTCGGAAAGAACCTATAGGAATTAGAGGTACATAAGCTATTACAATCCACTCAGTTGTAATGTAAGATTCATCTGACAAAAGCTCTCGTTTTCCAT # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCAAATAAATGAAACCTGCTTGCGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.40,-0.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA // Array 2 4568-6201 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000135.1 Scytonema sp. UIC 10036 c00229_NODE_22.., whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 4568 37 100.0 35 ..................................... ATGCGATCCGCAATTGCTTCCAAATATCCTGATGT 4640 37 100.0 34 ..................................... TAATACGAAAGACAAGGAAACACGCAATGGCTAC 4711 37 100.0 34 ..................................... GATTATTTTGATATTTTAACCTTCTAGAAAAAGC 4782 37 100.0 36 ..................................... CATTAGATCGTTCTGTATACATTGAAAACCATCCAA 4855 37 100.0 32 ..................................... TCTCAAAGATTGCAGATCGCTCTCTCTTGTTA 4924 37 100.0 37 ..................................... ATGCAGGCAGGAGTGAGGCAATCTGGTTCATCAAAAA 4998 37 100.0 38 ..................................... TACTCAGATCGCTTTCTTGCTTGAGAATATCTAGCTGT 5073 37 100.0 39 ..................................... GAACTATTAGAAGCTACAAGATTGGATGTGTTGATGGTG 5149 37 100.0 38 ..................................... CTGTGAGTTTTAATTCTCTATCTAGTCTCTGGGGGAAA 5224 37 100.0 34 ..................................... TTTTGTAGTGTTAGCTGTGCAGCAGAAAGTAGTA 5295 37 100.0 39 ..................................... CTCAACTCCCAACCAACAGAATCCCCAAAATCGCTCAAG 5371 37 100.0 34 ..................................... GAAAAAGAAAAATGGTAGCGAACAACGAGTTGCT 5442 37 100.0 36 ..................................... ATGGAACACTCGCATAAGCATATCTTTGGCTTGCTC 5515 37 100.0 37 ..................................... TTGCATTTTTGTTTCTAGGTCTTGACAATCTTAAGTT 5589 37 100.0 33 ..................................... AAAATAGCAGCACTTAAAGCTACAAACGATTAC 5659 37 100.0 35 ..................................... ATCGCTATTGGCGATTTTTTAGCAATATTAATTTT 5731 37 100.0 36 ..................................... ATTACTATTTAATGCTATGGAGAACCAACGGTAATA 5804 37 86.5 36 A..A....A....T.......A............... GGATTCATCAAAGAATTTGATTGAAGCATTGGAAGC 5877 37 100.0 36 ..................................... CGAAGCACACATTGAAACTATCAAAGACGGTATCAA 5950 37 100.0 35 ..................................... AAAAAGGAGATGCGATATCGCATTGAGTAGCATTT 6022 37 100.0 34 ..................................... GATACTTCCTCATTCATGGCGAGTACTCCTTCTA 6093 37 100.0 35 ..................................... AGGATCGAGAAAATCAATGATGAGCGATCGCTCAT 6165 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 23 37 99.4 36 CTTTCAAATAAATGAAACCCGCTTGCGGGATTGAAAC # Left flank : GCGTTTGTTGATTTTCACATAAAGCCTGACGGAGAATCTCTTTTACTTCTTCTTCTAGGGAACGACCATTTTTTGAAGCTCGTTGTTGCAAAAGGTTTTTGATGTTGTCGTCAATGTTAAAAATGGTAATGTTTGTCATGGTGAATGAATTTGATTGTGATGTTTTTAGATATGTAATAATTGTGTAGCCGTTCTGCTGTTTCTGATGACGTTACCTGTGTCGGTCAGCAAGGCTATTACCGACAATTCCAAGCAACCTCGACAGCAAGACACAATAATATTATGATATTAGAGTAATCTGGCAAATTTTTTGGCAGGGCAAAGCATGGGCGAAAACCCCCCACCTCCTGCCAAATCGACGGAACCTTGACAAATCAATAGTTTCAATGATTGAGGTCTGAGCAAGAGCTTTTTGATGAAAGCCTGAAATAGACTTTTAAAACAGTCCTGCCAAAATTGGTGGTGGAAGTGGCTCTAAAGTTAGCTTCGGTCTGCTGCCC # Right flank : CAGAAATTAACCATATTATAGGGGATAGAATGGCTGGAATTGGTGAGGATTACGTAAGTTATAAAGTCAGAGTTCGTAACAGTAATATCCAAAAAGGTAAGAGTGCGGGATATCAGGTAATTTATCAAGCAGCGTCTTTAAAAAGCAAAGTTATACTCGGTGCAAAAATTTTCTTAGCGCCTCAGCGTCTTTGCGTGAGGCTATTCTAAATTAGACTTTTTGCAAGAAAGTAAGTGGGTGCAAATAATCGTTACTGGTTGGTAATTGCGATGCATGCGAAGACAGCGCTACTACGAACCAAATACAGAGATTTTTCTTTTTGTTGTATGGTTTGGTTTTTATCCGCTGACTTACTAAGTCCAGAAAATCAACAAATACTGTGCCACTGTTGCAACTGGCTCTCACCGAATTTTCTAGTAAAAGTCATCCATTCAGGTGAAGCCGTGTACTGGCAAAAAAAATATCATGAAGGAAAGTTAAGCAGCATAACCCCAGTTGCT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCAAATAAATGAAACCCGCTTGCGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.60,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA // Array 1 71607-72741 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000019.1 Scytonema sp. UIC 10036 c00039_NODE_39.., whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== =========================================== ================== 71607 35 100.0 41 ................................... GATCACTACCAAGCTGGATAAAAAGAATAGAAAGCTGCTCA 71683 35 100.0 39 ................................... AATATCAAAAAAAGCCACCACCAACCAAATAGGTTAATA 71757 35 100.0 43 ................................... CGAAGGAATATCCGATTGCTTCGATTTCCTCAGCAGTCAAAAT 71835 35 100.0 37 ................................... TGATCCATCCTTCGAGGAAAAACCTTCGGTAATATTC 71907 35 100.0 37 ................................... TTTAAGAAAGATAGCTTATTAGCTTTTGACACTTTCT 71979 35 100.0 42 ................................... TAGTCTTTTCTCGAACTTGTCTGCTCTTAGATAAAGATAAAA 72056 35 100.0 38 ................................... GTAGGTGTAGGTAGTGGTTTGACCACCAGACTTGGAGT 72129 35 100.0 38 ................................... CAAGTTTATATGAATTATACCGTACTCATAATTGTATG 72202 35 100.0 36 ................................... CTGTGTCATCATCAGTCCATCCGTCACTATTACAGA 72273 35 100.0 35 ................................... TATTGCTTCTTGGATTGTATTTAACATTATTTTTT 72343 35 100.0 39 ................................... ACAATTGGCTGGAATCGTCCCAGGTAACGCATTCTTAAT 72417 35 100.0 38 ................................... ATTTATCGACCCCAAGAGTGTACACTTGATTACAATTT 72490 35 100.0 36 ................................... AGTATGGAGTTCTGGCTGCTCCTTGTATAGTCTCAA 72561 35 100.0 40 ................................... CTAAATTTCCGAGCTTCCGCAATTGACTCAAAGTCATTAA 72636 35 100.0 36 ................................... TGTTGAACAGCCATGTAGAAACATAAGCAGAAGATA 72707 35 80.0 0 ...........................C.CCCTTT | ========== ====== ====== ====== =================================== =========================================== ================== 16 35 98.8 38 CTTTGAACTTCTTCGGAAGTTGAACTAATGGAAAC # Left flank : AAATGAATTTTTAGTGTATTTATTCAGTACTTCCCTAGCAAAAGAACTTATTCCGGAAAAATACGGAGACAAGAATCATTTGTGAAGAACCTATGTTACTATTTTATGATAAGCGTAATAAGCAACCGCTTTTGAGGAAGTGGGTGCAATGGAAGATATAGTTGAGGTAAATTCGTCTTATCCGAGCAGTGTTGGGAGTGGGTAAGTGCGATAAGTTGCGTACAGCTTGCGCTTCGCGATCCCTTGAATGTGTATGGCGAGCTTAGCGCATAAGATAAGTTTATGTTTTTTGTATTATTGATAAGCATCTGAGGGGGTCAAGCAATGGCTGAAACCCTCATTCTTTCGTTGAACCCCTCAGGTAACTTGTTGGATAAGGGTTTGAAGGTGGTTGGTTATGAGTTTATTGAGAAGAATTGCTAATAATTTGGGTAAAAACTTGACCCCCTCAGATAATGGGGTGTACAATTCAGTCAAGGTAAGGCTTTCAAAAGTCTAGC # Right flank : TCCGCCATAAGATTACCGAGCTTCTTCTCCTCTTTCTTCGTGTACTTTGCGCCTTTGCGGTTCATTTATAGCAGTTGTCAATTGGGTGCAATACATCAAAGAATTAAGCAACCGCAACCTATAGCAGATGAACACAGATAAATTTGTAGTTCATTCAAGTGAGAACCGCTATAATTAAGTAATCTTCAAGCGGGATAGGAGTAATGGAAACGGTAGCCTATTTCGTGGAATAATGTTCCGGAATTACTTTGAAAGTTACGAAATTCCTGACCAAAATCACAACCCAAATAATGGATATATAAAACTTCCTTACCTAGAAAATTGGTCAAGACGAACAAAAGTTGTATACTCCGGACTTCGCTTGCTGAATTTTTTTAAAAGCACGATCGCAACTCTATCTGAGGCGTATCATACCCCCATATACAAGGAATTATAACGGCAAATTATGTAAGTGAAGCGATCGCGCACTGTCTCCGGAGGGGAATCGCTGTCTCAAAATT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTGAACTTCTTCGGAAGTTGAACTAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.10,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 84225-84973 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000019.1 Scytonema sp. UIC 10036 c00039_NODE_39.., whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ======================================== ================== 84225 35 100.0 35 ................................... GGGGTCTTCCTTAGGATCCACTCGAGAGAAGTAAT 84295 35 100.0 35 ................................... GTGTATTGGCATCAACAGATAAGTTGAGCCCAACA 84365 35 100.0 36 ................................... ACTGGCCTTTCTTGCCAGTGTAAAGGACTTTCAATT 84436 35 100.0 40 ................................... TCTGCTTGTGTAACTGAGGAGTCAGAACCTTCAACAAAAT 84511 35 100.0 38 ................................... AAATTTGTCACGTGACCTACCACCTTCTCGATAGGAAG 84584 35 100.0 34 ................................... TAGGCACTTCCTCCGGTACGTTGCCGGATTAAAG 84653 35 100.0 38 ................................... TTCTGACGAGCTATGGCTTGTTATTAATGCGTTAAAAT 84726 35 100.0 35 ................................... CGTTTTAACGCCTGTTTTGGTACCCGCTTTATTAA 84796 35 100.0 37 ................................... TGTAATATCAAGTCCCATTTACTGGAAACTACGCTAT 84868 35 100.0 37 ................................... GATAGTTCTCCATTGCCAGCGTATTGCTGGTACAGAG 84940 34 80.0 0 ........A.............G..-.C.CT.G.. | ========== ====== ====== ====== =================================== ======================================== ================== 11 35 98.2 37 CTTTGAACTTCTTCGGAAGTTGAACTAATGGAAAC # Left flank : TCTAAAGCAGTTAAATAAGCGGTGTTTCAAGGCGTGTGTTATTTTACAGATGTATCTAAGTGAAATTTTGGTGTATTAATTAAGTAATTCTCTAGCAACAGAACTTATTCCGGAAAAATACTGAGATAATAATCATTGTTGAAAATTATATGTTACTGTTGTATGAAAATGGCAGTGAGCAAGCGCTTTTGAGGGAGTGGGTGTAGTGCGATAAGTTGGATAGGGCTTGCGCTTCACGAACGCGTGCGTATGTATGGCACTCTTTATTAATAAGATAAAATTATAATTTTTATATTATTGATAAGCATCTGAGGGGGTCAGCCAATGCCTGAAACCCGCATTCTTTCGTTGCTCCCCTCAGATAACTTGCAGAATAAGGGTTTGAAGGTGGTAGGTTATGAGTTTATTGAGAATTATTACTAATAATTTGGTTACAAACTTGACCCCCTCAGATAATGGGGTGTATAATTCGGTCAGGGCAAAGCTTTCAAAAGTCTAGC # Right flank : CTTTGCTTGATAAATTTTTTGAAAAACGCTATTGCTTCTGTCAGGAGCGTGAAAATGCTGAGCAAGGACGCCTACAATAGGTGCTGTATAGCGACTCCCTTCCCACCATAAGATTACCGATCTTCTCTTCTTTCTTCGTGTACTTTGCGTCTTTGCGGTTCATTTAATTAGGTAATCTTTGAGTGGGATAGTAACTCGACTATCAAACATATTCCGACGTTTTAATTCCCAAAGTTTCCATTAGTACAGTTAGCGAAATCCCACGAATACCAGACAACTCTGTCAAAGATTCTATACCTTGTGCTTGCAGTTTTTCTACTTGTTCAGGTAGCTGCAATAAGTTTTGATGCTCATTGACTATCAAAATCTCTGCTTGACAGTTAGCGAATAAAGTTCTGCTATTGTAATTGAAGAAACTAGTAGAGATTCAGTTAAACTTTCTAAATATTGGATAGCTTGAGGTTGTCCGCGCAAATAATCAATTAAAACATCGGTATGGA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTGAACTTCTTCGGAAGTTGAACTAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.10,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 3 96437-96041 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000019.1 Scytonema sp. UIC 10036 c00039_NODE_39.., whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ======================================= ================== 96436 35 82.9 39 AGCAGT............................. ATGCAGTACTCCTAAAGTTTAATACCGGTGAATATTACG G [96427] 96361 35 100.0 38 ................................... ATGATTCTGGCACCCATAGTGCTGTTAACTGCGCTGTC 96288 35 100.0 35 ................................... TTCTACTCCTGCTGAAGAACGAGACATAGTTGTTT 96218 35 100.0 37 ................................... AAAAAAATGCCTTGAGTTGATCAGTAAGAAGTCATGT 96146 35 100.0 36 ................................... CTTTTCTCTACAAGTTCAAAACAATTCTCTTCTAGA 96075 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ======================================= ================== 6 35 97.1 37 GTTTCCATTAGTTCGACTTCCGAAGAAGTTCAAAG # Left flank : ATAGTAAAGGATGAAACCAGTTAGTGTGACTACCTTTCCCTGGTTTATATGTAAATCCTGCTTGTAGTAACAGGCTTTTTAGTTCTCTGATTTTTTTTGCATATACTCAAATTATATTCTTACCCAATACTGCAAGGTATCTTGAAGATTTTCCATTGAGACAAGCACCGAATGCAGTAGATGAACCTTTGTGCAGGGGAGAAAAAAGGTTTAACCGACAAGTATTGAACCAACCCCTAAGCCACCGCGATACCGATCGCGAGTTTTGAATAACCCTGCTAGTTCATCTCGGTAATACAGCAGTCCCCGTGGGTTTTCGCTATGAATCCGCTGTAACGTCTCTAGCATAATGTCCTTAGTCAAGTAGCGCTGGCGGACTGGGGAAGTTGGCAACTCTTCAGGTGAGCCGCTATTCTGCTTGTTGTTTTTACGTGCTGTCTGCAACTTATTGTATTCAACCACTTCTATGTGATATTTCCCCCCCTATTTTCTCTTAATCA # Right flank : GCTAGACTTGTGAAAGCCTTACCCTGACTGAATTATAAACCCCATTATCTGAGGGGGTCAAGTTTTCAGCCAAATTATTAGCAATTCTTCTCAATAAACTCATAACCAATCACCTTCAAACCCTTATTCAGCAAGTTATCTGAGGGGGTCAACGATAGAATGAGGCTTTCAGCCATTGCTTGACCCCCTCAGATGCTTATCAATGAGAATATTTTGATAAGCTGTGCTAATGCATTACTCAGAGTGTTGGGTTTCGTTCCTCAACCCAACCTACCCAAAATTATAACTTCCAAATCATTGGTCGATACATCTCAACTTCACCCATCAAACAAGCGACATACTCCCGTACCTGTAATTCCAAACATCTCCGGAAATTTACTTGATTTCCTGTATGGGGGTGGGTTATCTCTGATTGTAATTTTTCTTCCCAATGTTTGAGAAATTTTTTGAGCGAATGCGGTTGGAGGTAGACTCCATTTTTTTCGTCGGGTGGCGTAAAC # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATTAGTTCGACTTCCGAAGAAGTTCAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.10,-4.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA // Array 1 17153-16301 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000194.1 Scytonema sp. UIC 10036 c00322_NODE_32.., whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================== ================== 17152 36 100.0 39 .................................... AATTTCTCATCCAAAATTTTGATACCGTTTACAGTTGCG 17077 36 100.0 37 .................................... AAGCAAAGATAGAAGCTGACACTTGCGTTCCATGATT 17004 36 100.0 34 .................................... ACATTAAAACAGCAAACTTTTAGTAATTATTTCG 16934 36 100.0 36 .................................... TTTTGTAAGCAAATCCTGAAAAATCAAACCTTTTTG 16862 36 100.0 38 .................................... CTTGAGGGCTTTGCTGCTTTGCGATAATACGGTTTAAA 16788 36 100.0 43 .................................... CCTCGGAATCCAAACCTGTAGAAATGCAACGCAAGAGTGAACT 16709 36 88.9 38 ..........A.A..A..G................. GATGTAACTAGAAGCGCTTGTATCAGTTTATTTTGATA 16635 36 86.1 37 ..........A.A..A.....C.......C...... GTGAGCTGTTCTTTGTACTCCTCAAGCTTTGCTTCTA 16562 36 83.3 40 ....C.....A.A..A.....C.......C...... GTTATTGACCCAGAGAAAAGCATATGGCTTGTCTGAGGGA 16486 36 86.1 43 ....C.....A.A..A.............C...... AACTCTTTGAAGGGGATTTGGCTTTGAGCAGTAGTTAGCACGC 16407 36 88.9 35 ....C.....A.A..A.................... CCATGTCTTCTTTCAACACATAGATGACTTTCAGC 16336 36 83.3 0 ....C.........................TTT.TA | ========== ====== ====== ====== ==================================== =========================================== ================== 12 36 93.0 38 CTTTACACTTCCCTCGCCCCGAAAGGGGATGGAAAC # Left flank : GGTGTGTAGATGTCAGTGGTCAACAGGGTACAAGCTTCACGTATGCGACACGCTGTAAACAGGCATACTCCAAACAAAGTTCGGTCACGGTCAAATACTAGCCCGTGGTTGAAAATTTGCTGTATCTCCTCATGTGTAAGCACTTTAGCCCTACCATGTCGATTGACTTTCATCGCTCAACTGCTGTTGACCCTGTATCAACAGTCTACGGCTAAGTAGGTCACTAAATTTTCTTTATCAGCTACTCAATTAAGTTTTGAGACTAAAACTTGACATTATAAATCACAACTTCTATGTTTTAGGCAGTGTTGACTCAAATCGACACACCTCGCCCGAACCTTGAAAACCGCATAACTTCGTTAAGGTGTGTCGATGGCTTACGCTGTAAGACTTTCAGGCTGCAAAAAAGACCACTTTGGGAAAATTTTTGAGAATTTTTTAGAGGTGTGTCGATTAGGGGGTCTGAAACTCGCTCACAGTAAGGCTTTCAAGAGTGAACT # Right flank : AGACATGAAAAAGCCCGTATTTTGGTGTTTACAGGCGATTTACTTATGAGAAAACTTTTCGAGAAAGTTATTTCTTTATCTGTAAAATGAAAAAAAGTCCTTTATGTCGAAGGACTTCTATACTCATGATGTGAAACTGGTGGTCTCTCTGGATTGCCAGTTTTTAAATTTGTGGTGGAGAACTACCACCATTTCGGTCACGCAAGTAATTAAGTATTTGATTAACTGAATTACGTAATTCTTGACGGTCTATTGCGGCTTGCTCTGCTAGTGCGTCTACCCTTTGGCTTACAGCAGCTACGTTCTCGGTCAATAGCTGAATGTTGGCTACCAATACATCAATGTTTCCATCATGTTGCTTGATTGTTTCGTCATGTTCAGCTACTTTCTCGCCTACGTTGACAAATAAAGTTTCTAGTCTACTTAAGCGTTCTTCTATGGTTGGTTGATTTGTGGTCATATACAGTTCTCCTTATTTAATAGCTAGTATCGCGTATTCT # Questionable array : NO Score: 2.79 # Score Detail : 1:0, 2:0, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.88, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTACACTTCCCTCGCCCCGAAAGGGGATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.20,-7.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [21-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,1.15 Confidence: MEDIUM] # Array family : NA // Array 1 8604-8425 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000195.1 Scytonema sp. UIC 10036 c00323_NODE_32.., whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ================================= ================== 8603 38 100.0 32 ...................................... CTCAAAAATAGGCTTTGCTTTTTTAACAAGAG 8533 38 100.0 33 ...................................... TCTGAGATATGCTGTCTATCTCTTCTACCCAGG 8462 38 100.0 0 ...................................... | ========== ====== ====== ====== ====================================== ================================= ================== 3 38 100.0 33 TGGCAATTTATACGACTCCCTATTAGGGATTGAAACTT # Left flank : TCTTCATGGTGAGAAACACCCCATCTCTCGGCTCTGTCGGCTCTAGAAAGGGATTGTTGATGACAACGGGAAAATTGAAATCCTCCGTTCCAATCAGTGGAAAGCCCAGGAAGATTTTTGGGGTTTTATCATTAAAAGGTAAAATAGATGTCTGGTTGTCATCTTTTTCAACTTGAATGGCTATACTGGTCAGTTCTTTGGACAGACAAGCAAAATACAGCTTCTGAGTGCGATCGCCTTGGATTTTATCAAATTCAACGATTTTGATGTCGGCGGTTAAATGAGTTGGCTCTTGCTTCTCGTAAACGATTTTTTCACAATTGGTTCTTTCAATCTCCACCCGTTTAATTTTATCGATAAAAATTAACGTGTAGGGAAGGGAATTTTCCAAATCGTCCAATCCTACTTCTGCGATCGCTTTACCCGATTCATCAAGTTCGTACTCGAAAGTGGTATTGCAAGAAATTGTGTAATTGGCTGAGAGCCATTTTTGATTAAAG # Right flank : CTTCGTTGCGATCGCACTTAATGGAGTACAGCCGTATCGCTTAAGTGATGAGCAAGAATAAAATATGCTTTGGTGGCAGTTCTCTTGAAAAATTGAGCGATAAGCACTCTTTAAGCTTGTGCTACTGAATAACGCACCGAGGAGTGGAAAGGACGGAGCGATCGCCCCAGAAGCATGCCAATGGGCTTCCACCATTGCTGTCGCTGGGGCTTCTGCAATTGCCTGTGCAGTTTCCTTTGCTGTTACCTTTGCCGGAGCCGTTGCCGTTACTGGAATAGTTGACGTTTTTGATAGCAGCGCGATCGCAGGCAAATTACTCATCCTTGGCGCACCGGGTATGTGCTTCTTGAATAACGCCGCGATCGCAGCCCGAGAACTTCTGCATCAGTTTACCCTAGTTGCAATTCTCGATATCGACATGCATCACGGTAACGGTACACAGCAAATTTTTTATCAGCATGGTGACGTTTTGACAATCTCAATTCACGGGTTACCGACCA # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGGCAATTTATACGACTCCCTATTAGGGATTGAAACTT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.54%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.50,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : NA // Array 1 22256-19950 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000219.1 Scytonema sp. UIC 10036 c00361_NODE_36.., whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 22255 37 73.0 37 ....G.....T..TTT..A......G..T...TT... CTTAAGACTCTGTCTATATCTTGACAAGGCCTATCAA 22181 37 100.0 35 ..................................... GATAAAGCTACGCCCATTCGCGTTGCTAATTCTTG 22109 37 100.0 37 ..................................... GAAAATGTTAGGGCTGAACTAAAAGAATTAAAAGCAA 22035 37 100.0 37 ..................................... TTCTTTGGGATGATATTTATTATGTTTGTTGTCCCAA 21961 37 100.0 33 ..................................... GATCACGACGCCTATTGTCTTAAGCACCAAATT 21891 37 100.0 40 ..................................... AAGCTTGACAATAAATTAAAAACTGTAGAAATACAAGCCT 21814 37 100.0 38 ..................................... TTGCCGACTAACTTTGAAAAACGCGTTAGCCCAACTGA 21739 37 100.0 37 ..................................... TGCAACGTCCCAACTGCTTTGATTTTTTCGCAAGGCG 21665 37 100.0 36 ..................................... AGAGACTGATTGGGTTCTTGGTTCCAGCGATGGATT 21592 37 100.0 35 ..................................... AACACTGGGAAATAATTTCTTGAAATCGACATCAA 21520 37 100.0 37 ..................................... AAGAAGCTAGCGGCGCTATTGGAGATAGCCACGACAT 21446 37 100.0 37 ..................................... GATTTCATCGATATCCAGCACTTGAGACAAGAGGTCG 21372 37 100.0 34 ..................................... ATTCAGATTCTTCGCCTTCGTCCTCTTCATCCCA 21301 37 100.0 40 ..................................... AGCACATCTTACGTCCTTCCTTTTTCGAGATTTTGGCAAA 21224 37 100.0 38 ..................................... AGCAATGCTGTTTCTAGAATCCCGCCAAAAACCTCAAA 21149 37 100.0 38 ..................................... TTTCTTCTAGAGTGAATAACAGATCGGATAGTTCCGGA 21074 37 100.0 35 ..................................... GTTCGTATTTCTCCCATATCTCTATAGGGTTGAAC 21002 37 100.0 37 ..................................... GGCAATCCCCCCGCTATGAGCGTGCAAGTCCTTCCAC 20928 37 100.0 32 ..................................... CTTTTAAGAAAAAACCTGAATGCAAGGTTGGT 20859 37 100.0 38 ..................................... ATTTCGATGGAACGCTTACTGTGACGGATTTGGTAGTT 20784 37 100.0 36 ..................................... ACTCATAGGGGTATTTAGCAGCGAGATCTTGCAACT 20711 37 100.0 35 ..................................... GAAATTGTGGAAATTCAAGAGATTTTCGCTTCTAC 20639 37 100.0 34 ..................................... GCTTAATAATTTTACCAGTATCCAAATCCCGATG 20568 37 100.0 34 ..................................... GTGACGGTAAATTGATTTTCAAATAATATTATGC 20497 37 100.0 30 ..................................... AACCTTGTTGTAATAAGGTTTTAGCTAGAG 20430 37 100.0 36 ..................................... TACAAGTTTTTACTTTACCTGATTTGTCAGCTTTGG 20357 37 100.0 39 ..................................... GTCCACCAACCCTCCACGAGTACCACCCCATTTCCTGAC 20281 37 100.0 36 ..................................... CGCGTAAATTCTCCGAGTTCGTCAAAAGCTTTTAAA 20208 37 100.0 38 ..................................... GCTCAATGACTCCCTACTAGGGATTGAAACTTAATATT 20133 37 100.0 36 ..................................... TGGCAGGAGATCTACGATCGCGCTGAAGTCATAGTT 20060 37 100.0 37 ..................................... TTTTTCTAGTGCGTTTGACTCATCCGTGTTTATTTCT 19986 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 32 37 99.2 36 GTTTCATATTAATGACTTCCGCTTGCGGAATTGAAAC # Left flank : ATTATTATTTTGTATTTGTATATGT # Right flank : TGCTTAAATGTTACCATGTTTTTTATAAATTAATATTAAGCATACTTGACAATTTATTTTTCTAATGATAATGAACTCTTTGACAATAAGGTTTATACTTGCCATCCTGTTGTCTACTGCTCCATTCATTAATTTTTTGAGTTAACATTGCTAACGGTAGAACCAGGACAATGAATATCTTCACGTATGTAGTCGGGCAATCTGTAGATTTTGCTCTTAGTTTAGATGAATGGGCATTCAAAGCAGAGGAATATGTGTATCGCTATTTCAACGGAAATAGAGAAAATGTCCGTAATACTCGTTTTGGAGATTGCATATCAAAAATACAATTTTTAAGCCAATTGCTTAAAGATTTAGAACAAGGATTCACAATTGATAATTTTCGAGGCGTAATAGATGAGCAAGGAATTCTTCAAGCAATAGCTGCAATTAAGGATGTAGAATTATATAATGAAGGAGAAATAGTTCCGGCTATAGCACTCGAATCAATTTGTAACGCA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCATATTAATGACTTCCGCTTGCGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.80,-4.80] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : NA // Array 1 8032-8434 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000222.1 Scytonema sp. UIC 10036 c00368_NODE_36.., whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 8032 37 100.0 36 ..................................... ATAAAAATCAAACCGCATATATATAAAATATTTTAC 8105 37 100.0 38 ..................................... GGACAAGCGATCGATATAGAAGGAGGAGGAATTGAATT 8180 37 100.0 36 ..................................... ACTTGCTAGTGTTTCGTGGCCCCTGGTCAGTTTCAA 8253 37 100.0 35 ..................................... CAGATGCATTGTCAATCAATACGTGGAATTATATC 8325 37 100.0 36 ..................................... AGAACCTACTTCTCCAATGCGAGTACCTGGTTTAAC 8398 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 6 37 100.0 36 CTTGAAACTTAGCGATTCCCGGCAACGGGATTGAAAC # Left flank : TGTTGTACAAGAAGGGTCAACTGGCATAAGACATAACAGTTCTTTTGACAATTGCAAAGCCATAACGGCTATGCTATGGTCGTGGGTTGAATCTTCACAGTGAATTCAGTAGAAAGACTGGTGACAATGAATAACAGAAGTACTTAATCTAAGAATCAAGATGACCGTCGCCTTGGCTGAAGTGGGAGCATCGCACGAGCACGGGCGATGCCTTACCACAGCGGTACAATTAACATGAAGATATCTAACCGATTCTGGACGTTAGGATGTAGTCCGTCTATAATGTTACTAGATTGATGTTTGGCAGACCGAAGCGGGGGCTAAAACCAGGGGGGTTCTGCCAAAAACGCCAGAACCTAGACAAGTTAATAGTTACAGCGTTTTGAAGTTTGGCCCTATTGATAGTATGTGTCAATAAGCGAGCCGGAAATGAGGTCATTTTTTCGTTCTGCCAAAACGGCTTGTAGAATCCTTGCTCTGTAAGGGTTTCAGATGGCGGC # Right flank : CTCAAACTGAAAGCGCTCAGTCAATCTTGTCACTTTACCCAGGGGATGGCAGTAAAGTGGAAGCAGTTGATGGCAGTAAAAAAGCTTGAAATGCTGATGATGACGTTGAGCCTTCTGAGGCGATTATGACAATCACGGAAGCAGTGGATGGCAGTAAGTATAAGAATGGAAGCAGCAAAATGGCAGTAAGTATGTAATCAAATGACAAACAGCTAAAAGCGTTGCATAGCAATGGTTTTAAAGTTTTACATCATTGAGTATTGAGGCGATTCTAGTTGGGAGCATCCTAAAGACGGAAGCGTTGATGACAGATAAATGAGTACATAGTGGGCTGTTGTACTAAAATCCCATAGTACAAAAGCTTTAAGAATTATGGGATTTCTGGAGAAAAAGGTATGAATTAATACTCTATACGAAAAAGCTGGATAATAGTCTAAGCAAGGGTTTTATTGATTATAAGCCAAATTTTCTTTGAAGCAGTTGGTGGCAGCAAGTAGAAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGAAACTTAGCGATTCCCGGCAACGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.60,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : NA // Array 1 3181-1742 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000229.1 Scytonema sp. UIC 10036 c00380_NODE_38.., whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 3180 37 100.0 36 ..................................... TTAACAAAACCTACTGCTAAATGAAAAGTTTCTGTA 3107 37 100.0 39 ..................................... TAAATAGTACTTAGAAGGAATAAGAAAGTTATACATAAA 3031 37 100.0 35 ..................................... CTTAATTAGTTGTGGCTGGGAATATGACGATAGTG 2959 37 100.0 38 ..................................... ATTTTAATGGTTGAATACAGATTAAAAAACCTTCTGTA 2884 37 100.0 43 ..................................... CAGAAGGGGAATTTGCATCCCCACTTCCGCACCGCGATCGGGA 2804 37 100.0 37 ..................................... GTATCGGAGCCGATCGCATTAGAGTTCGAGCTACTTC 2730 37 100.0 41 ..................................... TTTTTGATCAAGGACTGCTTTATGCAGACGAATTCATGCTT 2652 37 100.0 35 ..................................... CCATCACCGAAGAGATGGCAGCAGAAAAGCAATTG 2580 37 100.0 36 ..................................... CCAATCACCTTTTTCTTTTTAGCCTTAACAAATAAA 2507 37 100.0 35 ..................................... CTCATGCTGTCTCCTGTTAAGCGCTTAACACTTTA 2435 37 100.0 36 ..................................... TATCGGGCGAGTATCGCATTAAGTAAGCAAATAAGA 2362 37 100.0 36 ..................................... GCATCACCGTTTATGTCCTGAGTTGCTAACCATTCG 2289 37 100.0 36 ..................................... GATAAAACCGATTTAAAAACCTTTTCACTGCTGCAG 2216 37 100.0 36 ..................................... AATCTATAAATAATCCTACTAAGCAATGTGAATCTT 2143 37 100.0 38 ..................................... TTTGCTCTCCTAATATACTTCTCAAAGCTGCAATCATT 2068 37 100.0 35 ..................................... AATAAATTAATATGGAATGCGATCGCATTCTAGAA 1996 37 100.0 36 ..................................... TTTGTTAGCGACGACTTCTAGTAGGGCACACTAAAG 1923 37 100.0 34 ..................................... TTTGACGCTGAAGCCGTAGCCGCACCCAACCCCA 1852 37 100.0 37 ..................................... TACCTACGTTTATGACTGGACTTCTTACCCATTGAGG 1778 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== =========================================== ================== 20 37 100.0 37 CTTGAAACGTAGCGACTCCCGGTAACGGGACTGAAAC # Left flank : GAGAAGGCGATCGCGGACAGTTGGCGGTATATGGTACGTTTTTTACCGAATGGCGATCGTTTGTCAGAGCCGAGCTTGGGGAAAAGTGTTTACAACCTTAAAGAGTTTGATTTGAATAAATTCGATCGCGATGAGATTGAGTTTTTGCAGCTCTATTCTTTGGTTGTACGTGCTTTGCGGTTGTGCGACCAGCGATAGCTTCGCTACTGCCTTCGGCAGATCGGTACAATTAACATGAAGATATCTAACCGATTGTAGACGTTAGGATGTAGTACGTCTATAATGTTACTAGATTGATGTTTGGCAAACCGAAGCGCGGGCTAAAACCTGGGGGGTTCTGCCAAAATCGCCAGAACCTAGACAAGTTAATAGTTACAGCGTTTTGATATTCGGCACTATTGATATTTTATGTCAATAAGTGAGGCTGAAATGAGGTCATTTTTTCGGCCTGCCAAAACGGCTTGTAGAATCCTTGCTCTGTAAGGGTTTCAGATGGCGTA # Right flank : CTAGAGTGGCTCCCCATCAATTCCTGAAAATTTATGTCAGGCTTGATGGTTGGCATATATTGGCAATTTTTGTCATGATTAAATAAACTTAGCCAAGGTCAATAGTCAATGACGACGCTGAACATCTCTTTGCCTGAAGCAATGCGAGCTTTTATTGATGAGGAAGTAGCCAAGGGTGGTTACAGTACTGCGAGTGAGTACATCCGCGATTTAATTCGTCAAGCCCAGAAAAAGGCTGAAGAAAAAAAGTTAGAAGCAATGTTGTTAGAGGGTTTAGATAGTGGAGAACCGATTGAGGTGACAGATGAATGGTGGGAACAAAAACGCGCTCAAATTCTGCAAGGTTTTCCACGGAAAAATAAATGACGAGACGTATTATTATTACGCTAAAAGCAAGCGAAGATATTGATGAATTGTTTGCTTATATTGCTCAAGATAATTATGATGTAGCATTAATTTTTTTTGATGCAACCAGGTTAACTTTTTCCTAATTAATTGAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGAAACGTAGCGACTCCCGGTAACGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.10,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.74 Confidence: HIGH] # Array family : NA // Array 1 13519-14069 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000279.1 Scytonema sp. UIC 10036 c00486_NODE_48.., whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 13519 36 100.0 39 .................................... AAATCGATACATTTTCGTCTACCTCAATGCCTTTTACAA 13594 36 100.0 37 .................................... GCTTTCCTCTACTGGTGTAGTCTCTTCTGTTACTGGG 13667 36 100.0 38 .................................... AAAAATTGGCACAGCATCCAGGACCTGTAGTTGCCAGT 13741 36 100.0 37 .................................... AGCTAAATATTTTCAAGTTGATGACACCGCAATTTAT 13814 36 100.0 39 .................................... CTTTCCACATAAGAGCGACAGCTTCCCCGGTTCTTACTC 13889 36 100.0 36 .................................... CAATCATTGCCGCTACACTTGTTACGAATCTAATAG 13961 36 100.0 37 .................................... TGGAAAAAGCAGAAAACAAGACTATTGCGATCGCACT 14034 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 8 36 100.0 38 GTCCCTACTCGCTAGGGAAATTAATCGATTGGAAAC # Left flank : CAGTCATACATATCAGCCTTACTTAATTCGTTAGTTCATGTTATACGTGGTAGCTTATGATATTCCTTGCGACAAACGGCGCAAAAAGGTATCAGATTTGCTAGAAGGATATGGCAAACGCGTACAGTACTCGGTTTTTGAGTGTCAATTACCTCCAAGTAAGTACAAAGAACTTTGTCAAAGGTTGAAGAAGAAGGTAAAACTTGCAGAAGACAGCGTGCGGTTTTATCCTCTGTCCCAGCACACTTGGGGACAAGTAGAGACGTGGGGCGTTGGTCCTCCTGTAACAGAGCTACCTGGTTCGATAATTGTCTAATTAGCGGCGAGGGGGTCGGTAAAAGTCTGAAATACTGATTCTTCCGTTGACTCCCTCGCCGCCTTGTCTAGTAAGCGTTTCAGCGATTTTTATGATGGTTTTTTCTCCCTTTCTCGTCTCAATTTCTGACCCCCTCGCAAACTGCCTCTGGACTCCTTACGGGGTAAGGGTCTAAACTAGAGGA # Right flank : TAGAAGAAATGCGCCGGGGCGCATATCGTGACTTTGGAATGCCCTAATCTCCAGGAAAATAAAAAGATTGGGTGAGGGCGGGGGAGAGGGGCGGGGGGGGAGGGGAGGGGGGGGG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCTACTCGCTAGGGAAATTAATCGATTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [45.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 3498-44 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000221.1 Scytonema sp. UIC 10036 c00366_NODE_36.., whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 3497 37 100.0 35 ..................................... AAGCTTTTGCTAGATGTTCTCGTAATATATTAAAT 3425 37 100.0 36 ..................................... GATTTAGCAGAAAATACTATTGCATGGGCAAATCAG 3352 37 100.0 37 ..................................... TAACTGTCCATAATCCAAAGTTAGACAAGCCGATTTT 3278 37 100.0 38 ..................................... CTTGCAGATGTAGTGCTATCGTCAAAAAATAAAAGGTC 3203 37 100.0 36 ..................................... TGGCAACACAAAGACAAAAGGTTGAAACTGTCGATC 3130 37 100.0 37 ..................................... GTAGCAGTAAAAAAGGTGGGAAAAAATCATCAAATCA 3056 37 100.0 32 ..................................... CTGAAATAGATACAGTAGAAACGATGATCCAA 2987 37 100.0 36 ..................................... CGTCAGGATACGGCACTTGTCCGTTATTTTTAGATA 2914 37 100.0 38 ..................................... ACTCAACTAGGCACGGTTAGCGACAAGTTGGCAGACAA 2839 37 100.0 36 ..................................... TGTTCATGATTACTCCTCATTTAACGCTTCAAGTTT 2766 37 100.0 35 ..................................... GATAATGCCTAAAAGAAAAGGTAATGGGAGAAGTC 2694 37 100.0 37 ..................................... CCAAAGTCTATGGCTATTGCTTGACAAGCCCGATCAA 2620 37 97.3 36 ....................................A CGATAAAGCTACGCCCATTCGCGTTGCTAATTCTTT 2547 37 100.0 38 ..................................... GAAAATGTTTAGGGCTGAACTAAAAGAATTAAAAGCAA 2472 37 100.0 35 ..................................... TTCTTTGGATGATATTTATTATTTTGTTGTCCCAA 2400 36 97.3 33 ................................-.... GATCACGACGCCTATTGTCTTAAGCACCAAATT 2331 36 97.3 40 ...................-................. AAGCTTGACAATAAATTAAAAACTGTAGAAATACAAGCCT 2255 37 100.0 38 ..................................... TTGCCGACTAACTTTGAAAAACGCGTTAGCCCAACTGA 2180 37 97.3 37 ....................................A CTGCAACGTCCCAACTGCTTTGATTTTTTCGCAGGCG 2106 36 97.3 35 ...................-................. AGAGACTGATTGGGTTCTTGGTTCCAGCATGGATT 2035 37 100.0 33 ..................................... AACACTGGAAATATTTTCTTGAAATCACATCAA 1965 37 94.6 37 ...................GC................ AAGAAGCTAGCGGCGCTATTGGAGATAGCCACGACAT 1891 36 97.3 37 .............................-....... GATTTCATCGATATCCAGCACTTGAGACAAGAGGTCG 1818 37 100.0 34 ..................................... ATTCAGATTCTTCGCCTTCGTCCTCTTCATCCCA T [1814] 1746 37 100.0 41 ..................................... AGCACATCTTACGTCCTTCCTTTTTCGAGATTTTTGGCAAA 1668 37 100.0 39 ..................................... AGCAATGCTGTTTCTAGAATCCCCGCCAAAAACCTCAAA 1592 37 100.0 38 ..................................... TTTCTTCTAGAGTGAATAACAGATCGGATAGTTCCGGA 1517 37 100.0 35 ..................................... GTTCGTATTTCTCCCATATCTCTATAGGGTTGAAC 1445 37 97.3 37 ....................................A CGGCAATCCCCCCCTATGAGCGTGCAAGTCCTTCCAC 1371 37 100.0 32 ..................................... CTTTTAAGAAAAAACCTGAATGCAAGGTTGGT 1302 36 97.3 40 ............-........................ ATTTCGATGGAACGCTTACTTGTGACGGATTTGGTACGTT 1226 36 97.3 35 ...........................-......... ACTCATAGGGTATTTAGCAGCGAGATCTTGCAACT 1155 37 100.0 35 ..................................... GAAATTGTGGAAATTCAAGAGATTTTCGCTTCTAC C [1135] 1082 37 100.0 33 ..................................... GCTTAATAATTTATACCAGTATCAAATCCGATG T [1050] 1011 37 100.0 35 ..................................... ATTTTTTGATTTGAGTTAACTGACAATCAAGCGCG 939 37 100.0 36 ..................................... TGGCGTGAACTACATTAACTTGCAATGATGATTGGC 866 36 97.3 35 .............................-....... ATGGAATTTCCAATGCCTTCGGGTCAAGCTTGGTT 795 37 100.0 34 ..................................... ATAACCTCTGACCACAAAATCAAAGGTATCGGGA 724 37 100.0 32 ..................................... GCTCCGCGATCGTGTGGATATTGACGACGGCA 655 37 100.0 37 ..................................... AAAAGCCATGGGCTTAAAAATGGGAAGAAAGCGATCG 581 36 97.3 35 .......-............................. TTTCGTTCTTCGGCAGTCGCCCGGTTTCGATGGAG 510 37 97.3 37 T.................................... TTAACTTCGACGACCAGTTGCTCGTATTTCTCTTTGG 436 36 97.3 36 ......................-.............. CGTGACGGTAAATTGCATTTTCAAATAATATTATGC 364 37 100.0 31 ..................................... AACCTTGTTGTAATAAGGTTTTAGCTTAGAG 296 37 100.0 36 ..................................... TACAAGTTTTTACTTTACCTGATTTGTCAGCTTTGG 223 36 97.3 36 ..........................-.......... CATCTTTGCTAGCGATATGCTGCCAGAGTATTACTG 151 37 100.0 34 ..................................... CAGCCTTACGAGTTTCTGATATGGGTTCCTGACG 80 37 89.2 0 ...............A...A.A...A........... | ========== ====== ====== ====== ===================================== ========================================= ================== 48 37 98.9 36 GTTTCATATTAATGACTTCCGCTTGCGGAATTGAAAC # Left flank : GCGATCGCAAAAAGAATAGACTTCTTGTAAAAGTAAAAAAATGAATAATAACCGCAGATGAACGCAGATACACACAGATAAAATTTTCTGATACAAGAAGTTTAATATTGAGTTAGGAGAAGCGTCTGTATTGGGATATCAAACAGAAAAACTTAAATTAAATATAGACGTTAAAAAACAGAAAAAGAACAAAAAAAATCAAGTTGACAATTTTCATGAGAGCATTTATCTTTAGCTTATACAGTACCGCAATCTGTTTTCAGCAGCCTCCGGTCACCTCTGTACCTCGACATTGGAATATGCTCAAAATTTTGGCGGGGCAAAGCACGGGCAAAAACCCCCTACCTCCCGCCAAAAGTCTGTAACCCTTATCCTGACAGGAATTTGTCTTGTAAAGTCAATCATTTGACAGTTTCTGCGATCGCTGAAATGGGGTTTTTTACCTCCCCTGCCAAAAATGGTTGTAGAAATCAAGATGGTGCAGGGTTTCAAATGCCGGG # Right flank : CCTGCGCCAGCTAATCCATGACAAAATAGAAGTTGGTGACTTAT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCATATTAATGACTTCCGCTTGCGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.80,-4.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [22-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA // Array 2 15903-17390 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000221.1 Scytonema sp. UIC 10036 c00366_NODE_36.., whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 15903 37 100.0 36 ..................................... AAACGGCTTCATTTTTACAAAATACTAAACAGTGAG 15976 37 100.0 38 ..................................... GACTCATCAGGCGGAGAGACATAAAAATCTTGATTGAT 16051 37 100.0 36 ..................................... AAGACCGTATCTCGTTTCACGCGAACTAAATGCCTG 16124 37 100.0 35 ..................................... ATCTCACTAGCGGTCTAGCATACTCAGCGTCTTTT 16196 37 100.0 36 ..................................... GGGAAAAATCCATACTGACGTGGATGTTTTTTAATA 16269 37 100.0 35 ..................................... TATGCCATTGATTTTTTAGTTTGTACCATCGTTTA 16341 37 100.0 35 ..................................... TGGCGATTTGGTCAAGAAAACGAAGTCAGTGTCCA 16413 37 100.0 34 ..................................... AGAGCAACATTGGCTATCCCAATTGATATAAATC 16484 37 100.0 35 ..................................... TAACATTAGAAAATCTTAAAGACGTTCGAGACACT 16556 37 100.0 36 ..................................... AAGTCAAATTTTTCTAAGAAGTGCCAAAAAGCCGGG 16629 37 100.0 36 ..................................... AATTGGTAGTGAACCTACCAACTTCATTTCCATTGA 16702 37 100.0 36 ..................................... ATCCTTTTTTAATATCTTCTTTTAATGTTTCATCTA 16775 37 100.0 33 ..................................... AGTTGAAAAATGTACATTACGACAATGATGATG 16845 37 100.0 36 ..................................... CTACTTCTTTAGAAATTGGATGCACGAGCCAACCGC 16918 37 100.0 39 ..................................... ATTCCATTCTATCAATTGAATGTCAAGCTCAACAGAGTA 16994 37 100.0 37 ..................................... CTCGTCAAAATAAAGACAATTGATTGTAAGTTGAAAA 17068 37 100.0 33 ..................................... GACTTATCAAGTCTTGCTAGACAAGGAGTCCGC 17138 37 100.0 38 ..................................... GTCCTAATTCCAACTTTATAAGAGATGATATTTGGGAA 17213 37 97.3 30 .......T............................. CTTTCTTCTTGTTTCCCAGAATTGCAATAT 17280 37 91.9 36 ......G..T..C........................ GTAAATCTGTAGGATTTTAATTAAGCGGCTGATTTA 17353 37 97.3 0 .....................T............... | T [17361] ========== ====== ====== ====== ===================================== ======================================= ================== 21 37 99.4 36 CTTTCAAATAAATGAAACCCGCTTGCGGGATTGAAAC # Left flank : CTTTATTTTACCTCGTCATTTACGACGTGCCAGACAATAAAGCAGCAAATAAGCGGCGAACAAAACTCCATAAAATGCTTTCAGGTTATGGGACATGGACACAATACAGCGTGTTTGAATGTTTTTTAACCGCCGTGCAGTTTGCTAAACTAACAGTACAGGTTGAGAATTTGATTAAACCAGCCGAAGATTCAGTACGTATCTATGTTTTGGACGCAGGTTCGGTACGCAAGACCATTACCTACGGTTCCGAGCAACCTCGACAGCAAGACACAATAATATTATGATATTAGGGTAGTCTTACAGATTTTTGGCAGGGCAAAGCACGGGCGAAAACCCCCCACCTCCCGCCAAAACGTCAGAACCTAGACAAATCAATAGTTTCAGCGATTGAGGTATGAGCACAGAGCCTTTGATGAAAGCCTGAAATAAACTTTTAAAACAGTCCCGCCAAAAATGGTCGTGGAAACGTCTCTACAGTTAGCTTCCGTTGGCTGCCC # Right flank : CCAGCATGACAGCAGAACAGCCAGTACAACCTCAAGAAATCCCCGTACTTGACTATGGCGAACAGCCAGAAGCCTCAAATTTGGTTTTGCCAAAATCTGCTTCTTTGTCTAGCCCTGCTCAATGGACTCATTTGCATTTTGAAGTACAGCAACAGCCCGCGCACGACACAGGTGAACACCGTCACCAAATGCATATTTTGACCATGGTGACATCTGGTACGCCAATTAGCCAGTCGATTGACGGGCAGTCTCAACATCATTTGGTGGGTCAAAATAACGCCTTTATTCTTCCAGCAGGGGCACTGCATCGCTGTAACTGGCAACAGGATATCGAGTTTATGTTTGTTGGGCTAGATCCCCATGTGTTTATTCAAGTGGGTCAGGAACTCGTTAATTCCGATCGCATCGAACTAATCCCCCAGTTTGCCACCATTCAAGATCCATTAATTCAAGGAATTCTGTTCACCCTAAAACAGGAATTAATCGCGGAAGGGATTAAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCAAATAAATGAAACCCGCTTGCGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.60,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 1 11481-12528 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000295.1 Scytonema sp. UIC 10036 c00524_NODE_52.., whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================================ ================== 11481 28 100.0 45 ............................ CGGCTGATCGATGGATAATTTTCTAGAACAAAAAGGGTTTCAATC C [11484] 11555 27 96.4 43 ........-................... AATACCGCCAATCATCATCTAGGGTCAGAAGATAGTTTCAATC 11625 28 100.0 46 ............................ CCAAGACTCCCAGCAGCTTATGGTTACTCCCTACAGTGTTTCAATC 11699 28 100.0 44 ............................ CAGAGAATTGTTGAAGCGTGTATCAAATGCCTTTAAAGTTCAAT 11771 27 92.9 46 ..C....................-.... CTAACAGGAAAACCAACAGCAGTGCATTGCCGTTGGAAGTTTCAAT G [11787] 11845 27 92.9 48 ..C.....-................... CTCAAGCGCAAACTCAAGCTCACTCCCGCCACTATTGCGTTTTCAATC 11920 28 100.0 45 ............................ CTATGACTGGGATGGAGTGAGTACAGCCAGTTCAAAGTTTCAATC 11993 28 100.0 44 ............................ GAAAGAATTTATATTCGGAGCAGTTCACCAGAGCCGGTTTCATC 12065 28 92.9 45 ..........TG................ CTTCAACAATTTCAGCGCAATAACCAACTGAGCATCGTTTCAATC 12138 28 100.0 44 ............................ TTGTTCTTGTTAAAGCCTTGCGCGGATCTCGTCCGGTTTCAATC 12210 27 96.4 47 ......-..................... CAAACCAAACAAATTTTTCAAGAACCGACTGGCCTAAAAGTTAAATC 12284 28 100.0 40 ............................ CACTGATAGGGCGATTGTCAGCCCCGTCTTTGGTTTCAAT T [12295] 12353 28 100.0 48 ............................ CTCGGTACAGTTTTCAATAGCTTTCAAGAGTCTTTGTGCGTTTCAATC 12429 28 100.0 44 ............................ TCAACATCCTTCGAGTTGGACACTCGTTCCATGAAGTTTCAATC 12501 28 67.9 0 ....A....C.G.G.AGA.AA....... | ========== ====== ====== ====== ============================ ================================================ ================== 15 28 96.0 45 CCGTTACCGGGTATCGCTACGTTTCAAG # Left flank : AAAGAGTAGTTCATCATGGGAAAGCCATTCCATCCCTTCGAGATTGATACCGACTACTGGCTTGTTCACCCCTACTGCATAAGCTCTAATGTATCCCGTTCCACGTTGGAGGTACAGTTCTGGGATTGGAGCAATATCCAGGATTTTACAAGCTTCAACAAAAGCATCATTGAGGTGGAGAAAATTACTCGTAGTGACTTTGAAATCATTACCAATTATTTGCATCCACAGTAACTTGTCAATGCCATACTCGTTGACTTTTTTAAGCAACAGGGGTAGCACTGGGGTTCTTTCTAACGACACCAGCGCTTTCCGGTCAAATGGATGTTCATAAACTTCTGTTTTTAGCCCTGTAAATTCTTTTCTTGCCATTTATTTATGTTATTAGTTTAATGATTCATCTTTAGATTTCCTAGATAATGCCAAACTTCAGCCAGCTTTTCAAGGAGCCGAAGAGATTACAGGTACAAAAGTTAGCTTAATTAGATGCCTGCCGAGAT # Right flank : CATCCAAAGCCAAATTTTCGAGAAAAAAAAAAAAGAGGGTTG # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGTTACCGGGTATCGCTACGTTTCAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [9-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA // Array 1 284-688 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000319.1 Scytonema sp. UIC 10036 c00579_NODE_57.., whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 284 37 100.0 38 ..................................... GTGTAGTGGGTCAGACTTCAACACGTACCACTTACCAA 359 37 100.0 37 ..................................... GATAGATTTTTAAAATAATTGAATATTTCTTGATAAG 433 37 100.0 36 ..................................... TTTCATCAATAACTATCAATAATTCTTTTTTATACT 506 37 100.0 35 ..................................... ATAAATTACCCGAACGTCTTCATAAATGCTTTTTG 578 37 100.0 36 ..................................... CTTTCGTAAGCTATTTTAATGTCATCTCCTTCTGGT 651 37 91.9 0 ..................................TGA | T [681] ========== ====== ====== ====== ===================================== ====================================== ================== 6 37 98.6 37 CTTTCCAACACCTAACACCCCGTAAGGGGATTGAAAC # Left flank : GGGTGGGGAGTGGGGAGGAAGGGCATTAAGCCCGAAGCTCCGAACATTAGCAATTCCAATTTTGACAAAATGGGCATTATCTGCTTATGATTAATTTGGCAAAGCTAAGCAAGAACTAAAACCCTAAGAGGTTTGTCAAGTACTTAGAACCTAGAAAAGTAAATACTTTTAAGCTTCACTCAGTTTCAGTAGGTGATTTTAAAGGCTCTGGTTTGACCAAAATTTTGAGGTTTGCCAAAATTTTGCTTCTAGTCCGTTGCTATTCTAAGTTTCAGACTGCGGAC # Right flank : AAGCATGAAAAAGCCCGTAGTCAGGTACTTACGGGCAATTTACTAATGGTAAAGGGATGGTTGGCGCTAAACTTTAACTACTTCACTTGCCTCATTGAGTGTGTAAACCGCTACAACTTTCTTTCCATCTTTAGTAGTTACCGTCCAACCAGGATTTTGTCTCAAGGTGTGCTCTATGTCCATCAAAGATGCTTCAGTAGCTTTGAGAGTTATGGTTTTACTTGACACAGTTGTGGTAGTTTGTTCTGCTGGATTGGCAGTAACAGAAGCATCTTCCGACTTGCCTGCTTTCATCGCTTGCCCATCCAAAAATTTATCATTGATTAGCTGGAGCAACTCTGTAATCCGTTTCGACCTATGCCGTTTATTGTAATAAGTCTCGGTTTTGCTAGGGTCTTTTGAATTCCCCATGCCGTGCTTAGTATTGTGCGACACAACCTCATCAGCGTGAGCTTTTATCCAATCCCCTATAACCATGCCGTTCGCTCCCGATAGTTCCC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:0, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCCAACACCTAACACCCCGTAAGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.70,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 1 730-98 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000299.1 Scytonema sp. UIC 10036 c00531_NODE_53.., whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 729 37 100.0 36 ..................................... GTTTAACTAAAGGATTAGCAGATAAATCTTCAGCAG 656 37 100.0 39 ..................................... CTAGCCAATAATGAAACACCCATCAGACCTAGAGTAGTC 580 37 100.0 37 ..................................... ACGCAGGTTACGCTATCGTCTATATACCCTATAGAAA 506 37 100.0 32 ..................................... CATCTTCTGGTGAAACTGAACCTACCATCAGG 437 37 100.0 40 ..................................... AGATTCAAAGCATAACTGGGAAGAATGCTTTCAAAAAGTC 360 37 100.0 43 ..................................... CCTTGGACGTTCCAAACTGGGGGTTACAGCGCAACGCTGGGGG 280 37 100.0 35 ..................................... CACATCACACATCTTAATTATCATGCCTAGAATCA 208 37 100.0 37 ..................................... TTTTTCTAAAATAAGCAAAGGAGATCTGCAATGGACA 134 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== =========================================== ================== 9 37 100.0 38 CTTGAAACGTAGCGATTCCCGGTAACGGGACTGAAAC # Left flank : TTTATTTGATTATTTACGATTTACCCGACAACAAAGCGGCAAACAAGCGTCGAAATCGGTTACACAAAATGCTGAGTGGTTATGGAAATTGGACGCAATACAGTGTGTTTGAATGTTTTTTAACTGCGGTAAAATTTACCGAGATGCAAATCAAGATTGAAAAGTTAATCAAACCAGAGGAAGATTCAGTGCGGGTGTACGTACTTGATGCAGGTGCAGTGAAGCGAACTATTACCTATGGTTCGGAAAAGCCTCGACAACAAGAAGCAATTATTATATAGTTGGTTAGTAGCTTTATGTTTGGCAGATCAAAGCGAGGGCTAAAACCTGGGGGGTTCTGCCAAAACAGCCAGAACCTAGACAAATTAATAGTTACAGCGTTTTGATATTCGGTACTATTGATAGTTTATATCAATAAGCGAGGCTGAAATGTGGTCATTTTTTCGATCTGCCAAAACTGCTTGTAGAATCCTTGTTCTGTAAGGTTTTTAGATGGCGGA # Right flank : CATATCATGTCGCTTAGACAGAACAGAGATAAAAAGAGTGTAAACGTATACAGAAAAGACAACGGGAGGGAGAAAAAAATAAGTGGTGGGGAGGAGGT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGAAACGTAGCGATTCCCGGTAACGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.10,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.74 Confidence: HIGH] # Array family : NA // Array 2 11544-10029 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000299.1 Scytonema sp. UIC 10036 c00531_NODE_53.., whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================= ================== 11543 34 97.1 45 .....................-............. ACCAGAAGGGGAATTTGCATCCCCACTTCCGCACGCGATCGGGAA 11464 35 100.0 40 ................................... ACGTATCGGAGCCGATTCGCATTAGAGTTCGAGCTACTTC 11389 34 97.1 43 ......................-............ ACTTTTTGATCAAGGACTGCTTTATGCAGACGAATTCATGCTT 11312 33 94.3 37 .................-........-........ ACCCATCACCGAAGAGATGGCAGCAGAAAAGCAATTG 11242 35 100.0 37 ................................... ACCCAATCACCTTTTCTTTTTAGCCTTAACAAATAAA 11170 35 100.0 37 ................................... ACCTCATGCTGTCTCCTGTTAAGCGCTTAACACTTTA 11098 35 100.0 39 ................................... ACTATCGGGCCGAGTATCGCATTAAGTAAGCAAATAAGA 11024 35 100.0 38 ................................... ACGCATCACCGTTTATGTCCTGAGTTGCTAACCATTCG 10951 35 100.0 39 ................................... ACGCGCGAATCGCTTAACGCAATGTTGAACGCAGCTAGA 10877 34 97.1 40 .................-................. AACTCAGAGATGTTCGCTTCCATCAGTGGGATGGAAACAA 10803 35 100.0 42 ................................... ACCATGACCCCTATTGGGACGAGATTACTGCTGGCCCATCAG 10726 34 97.1 39 ..............-.................... ACATATCCATATTGCCAGCGAACCCGGAAACATAAGTAG 10653 34 97.1 44 ..........................-........ ACTATAGTTGAATTACACATGTCATAGACGAAAGGCAGCGAAAG 10575 35 100.0 38 ................................... ACGATAAAACCGATTTAAAAACCTTTTCACTGCTGCAG A [10568] 10501 35 100.0 38 ................................... ACAATCTATAAATAATCCTACTAAGCAATGTGAATCTT G [10489] 10427 35 100.0 40 ................................... ACTTTGCTCTCCTAATATACTTCTCAAAGCTGCAATCATT 10352 35 100.0 36 ................................... CAATAATTAATATGGAATGCGATCGCCATTCTAGAA 10281 35 100.0 38 ................................... ACTTTGTTAGCGACGACTTCTAGTAGGGCACACTAAAG G [10264] 10207 35 100.0 36 ................................... CTTTGACGCTGAAGCCGTAGCCGCACCCAACCCCCA 10136 35 100.0 38 ................................... CTACCTACGTTTATGACTGGACTTCTTACCCATTGAGG 10063 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ============================================= ================== 21 35 99.0 39 CTTGAAACGTAGCGACTCCCGGTAACGGGACTGAA # Left flank : GAGTCGCTACGTTTTCAAGTAAAGTGTTAAGCGCTTAACAGGAGACAAGCATGAGGTTTCAAGTCCCGTTACCGGGAGTCGCTACGTTTCAAAGTTTATTTGTTAAGGCTAAAAAGAAAAGGTGAATTGGGTTTCAGTCCCGTTACGGGAGTCGCTACGTTTCAAGCAATTGGCTTTTCTGCTGCCATCTCTTCGGTGATGGGTTTCAGTCCCGTTACCGGGAGTCGCTACGTTTCAAGAAACATGAATTCGTCTGCATAAAAGCAGTCTTGATCAAAAAGTTTCAGTCCCGTTACCGGGAGTCGCTACGTTTCAAGGAAGTAGCTCGAACTCTAATGCGATCGGCTCCGATACGTTTCAGTCCCGTTACCGGGGTCGCTTCACGTTTCAAGTCCCGATCGCGGTGCGGAAGTGGGGATGCAAATTCCCCTTCTGGTTTCAGTCCCGGTAACGGGACTGAAACATTTTAATGGTTGAATACAGATTAAAAACCTTCTGTA # Right flank : ACCTAGAGTGGCTCCCCATCAATTCCTGAAAATTTTAATGTTCAGGCTTGATGGTTGGCATATATTGGCAATTTTTGTCATGATTAAATAAACTTAGCCAAGGTCAATAGTCAATGACGACGCTGAACATCTCTTTGCCTGAAGCAATGCGAGCTTTTTATTGATGAGGAAGTAGCCAAGGGTGGTTACAGTACTGCGAGTGAGTACATCCGCGATTTAATTCGTCAAGCCCAGAAAAGGCTGAAGAAAAAAAGTTAGAAGCAATGTTGTTAGAGGGTTTAGATAGTGGAGAACCGATTGAGGTGACAGATGAATGGTGGGAACGAAAAACGCGCTTCAAATTCTGCAAGGTTTCCACGGAAAAATAAATGACGAAGACGTATTATTATTACGGCTAAAAGCAAGCGAAGATATTGATGAATTGTTTTGCTTATATTGCTCAAGATAATTATGATGTAGCATTAATTTTTTTTGATGCAACCAGGTTAACTTTTTCCTAA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGAAACGTAGCGACTCCCGGTAACGGGACTGAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.10,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.74 Confidence: LOW] # Array family : NA // Array 3 11652-12273 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000299.1 Scytonema sp. UIC 10036 c00531_NODE_53.., whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================================== ================== 11652 27 96.4 46 ................-........... GACTGAAACGTATCGGAGCCGATCGCATTAGAGTTCGAGCTACTTC GA [11662] 11727 28 100.0 50 ............................ GACTGAAACTTTTTGATCAAGACTGCTTTTATGCAGACGAATTCATGTTT 11805 28 100.0 45 ............................ GACTGAAACCCATCACCGAAGAGATGGCAGCAGAAAAGCCAATTG 11878 27 96.4 46 .....................-...... GACTGAAACCCAATTCACCTTTTCTTTTTAGCCTTAACAAATAAAC 11951 28 96.4 46 T........................... GACTTGAAACCTCATGCTTGTCTCCTGTTAAGCGCTTAACACTTTA 12025 28 100.0 46 ............................ GACTGAAACTATCGGGCGAGTATCGCAATTAAGTAAGCAAATAAGA A [12029] 12100 28 100.0 44 ............................ ACTGAAACGCATCACCGTTTATGTCCTGAGTTGCTAACCATTCG 12172 27 96.4 47 ...................-........ GACTGAAACGCCGCGAATCGCTTAACGCAATGTTGAACGCAGCTAGA 12246 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================================== ================== 9 28 98.4 46 CTTGAAACGTAGCGACTCCCGGTAACGG # Left flank : GGAGTCGCTACGTTTCAAGTTTATTTGTTAAGGCTAAAAAGAAAAGGTGATTGGGTTTCAGTCCCGTTACCGGGAGTCGCTACGTTTCAAGCAATTGCTTTTCTGCTGCCATCTCTTCGGTGATGGGTTTCAGTCCGTTACCGGAGTCGCTACGTTTCAAGAAGCATGAATTCGTCTGCATAAAGCAGTCCTTGATCAAAAAGTTTCAGTCCCGTTCCGGGAGTCGCTACGTTTCAAGGAAGTAGCTCGAACTCTAATGCGAATCGGCTCCGATACGTTTCAGTCCCGTTACCGGGAGTCGCTACGTTTCAAGTTCCCGATCGCGTGCGGAAGTGGGGATGCAAATTCCCCTTCTGGTTTCAGTCCCGTTACGGGAGTCGCTACGTTTCAAGTACAGAAGGTTTTTAATCTGTATTCAACCATTAAAATGTTTCAGTCCCGTTACCGGGACTGAAACCAGAAGGGGAATTTGCATCCCCACTTCCGCACCGCGATCGGGA # Right flank : GACTGAAACTAAGATATATTAACTTAGAAAAGAGGATCTCTACTCAAATAGAAACCTCGAGCGTCTCGAAAACACGG # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGAAACGTAGCGACTCCCGGTAACGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [3-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 1962-2886 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000350.1 Scytonema sp. UIC 10036 c00731_NODE_73.., whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 1962 36 97.3 38 ..............................-...... AATAAGTCAACTTTAGCACAGTGGGTGCGATCGCACCT T,A,A [1980,1983,1985] 2039 37 100.0 36 ..................................... CAACTTAAGAATGATTTTAAAATAATTTACGACATT 2112 37 100.0 33 ..................................... TCAACCAGAAGAAACTGACAACACACTTCCTCC 2182 37 100.0 36 ..................................... AACGAAGGAAGTGACGAAGCGCAAGAGCGCAAGATG 2255 37 100.0 37 ..................................... TTTTCTGTAGTTGTTTGCTCGCTGAGGCGGCGACAAT 2329 37 100.0 38 ..................................... AATCAAGTCCAAGATTTTTCGCTGTTTCTCTTACATAG 2404 37 100.0 37 ..................................... CTTCAGGAAATCTCTTATATAAGAACGCGCATATATC 2478 37 100.0 36 ..................................... TTTAGAATTGCGTTCTTTTGAGAAATCCAATGAATA 2551 37 100.0 38 ..................................... TGAAGTACCACAAAGTTGTGCTTATGGCACTGAGTTAG 2626 37 100.0 39 ..................................... ATCGTTTTACTATTTTAGCGATTGAGTAATTCCAGTAAG 2702 37 100.0 38 ..................................... ATTTATAGGGGCAATCGCATTCATAACTGAGGGTAAAA 2777 37 100.0 36 ..................................... CTAATATCTGCCGTCTGCCGTACTCAGCTATCAGTA 2850 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 13 37 99.8 37 CTTGAAATGTAGCGACTCCCGGTAACGGGATTGAAAC # Left flank : AACGGATTGAAACCGAAAGCGCAAGAGCGCAAAATACTTAAAAGCTTGAAATGTAGCGACTCCCGTAACGGATTGAAACACAATATAGATTCTTTTTGAAAAATTTTAACTTGAATGTAGAGACTCCGTAACGGGATTAAACGTTTTAATTTATTAGTGGGAATGACAACGGTTTACTTGAAATGTAGCGACTCCCGTAACGATTGAAACAATTATAGTTGCCAAATTAATTACCTGGAACCTTGAATGTACACTCCCGTAACGGATTGAACGACAAAATGACATTTCATCCTCCCATGATTAGCTGAATGTAGCGACTCCGTAACGGGATTGAACATTGTTTTGTTGTTTTATCTTTTTACTTTAAACTTGAATGTACACTCCGTAACGGGATTGAAACAAATTATCTATTACATTCCTTTGACAAGGATTTTGACTGAAAAGCGACTCCGGTAAGGGATTGAAACTTTTATCAAGCCGCTTGTCTTTAGCGTGATTAG # Right flank : CAATTACATCCCCCTTGAGTGAAGAAGTTTATAAAGTCTTGAAACTCAGCGATCAATACTGCTCTGTGGGTTCATGCGCTTATACGTACTCGATAGTTTCCACTATTTTATGTAAACACAGCTATAGCATTTCTTAGGCAAATGAAGTATAAGAGTAAGGGCGTAATGCCTTGCACCCTTACAACTAGGTGTACCCCATTAGATTAGGAAACGCTGTAACGCCCTTTTTGGATTTGAATCACGTAAAGCTAGAGAAAGTATCACCAACTACCAGTGCAGAAACGGCAGCTTTGACCTTAGAGTGATACCACCGTTTCAGTAGCCTGGGTTCCCGCATTGCGGGGGCGAAGATGCAAGGTCACTTCAGTATCAAGACGCTTGAGAAACGTAAGCAACTTACCCTCGCTGAACCGTTGAAACTCTCCTCGCATCAAATACGATACTTCCGGCTGGGGAATGCCGAGCAGTTTACTAATTTCCCGTTGTTTCAAATTACGTTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGAAATGTAGCGACTCCCGGTAACGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.60,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : NA // Array 2 4090-4264 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000350.1 Scytonema sp. UIC 10036 c00731_NODE_73.., whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================== ================== 4090 28 96.4 45 ................T........... AGCGATCGCGTATTTGAATTGAAGTCGCATCTTTGGCTTGAAATG 4163 28 100.0 46 ............................ TGTATATTAAAATCTTTATATAATTCCAACGTTTTAACTTGAAACT 4237 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ============================================== ================== 3 28 98.8 46 TAGCGATTCCCGGTAACGGGATTGAAAC # Left flank : GTGGATTTTTTCTGAAAAGCGTGCAGGACATAAATCTTTTCCCCAATCTTCACGGCATAAACCGCTCTGTACGTGTCAGTATCATAGCGTTTGACAATCTCATACACGCCACTTCCCACTCCTTTAAAAGGCTTGGCATCCAGTGGTGTTTTCCCTGCCTGCACCAGTTGCAACGCATACCCTACCGCTTTTTGCACCTCTGAAGGAAACTCCCGAATGTTTTTCCGAGCGTCTCCCATCCAGACAAGAGGGCGTAAGGGTACTTCTGGAATGTCCTCACCATCTACCATAATATATGAAATTTCCTATAAATTCAAGTTAGCACCATAGCATGAAATTGCCATGACTTTTACTTCTACTGACGGAAAGCCATTAAGAAAAGCAGATCCCATAACTTTGATGATGGCAAGCTTTATTTTCCTTCCATAGCCGCCTTTGCCTTTTGACAAGAAGGACACTGATAAATAAGTAAACATTTATGTATATGTTGGCTTAAAACG # Right flank : CAACCAAATTGCGATCGGGAAACCCAACGATCGCTACTGAACCCATACCCGCACCACAAGAGGCGTAAGAAATGACCCAAGCCTTAACCAAACAAGTAACTTTTGATGAATTTATTGCTTGGTATCCAGCAAACACGCAACAACGCTATGAACTACATGATGGAGTAATTATCGAAATCTTCGCACCTACAGGAGACCACGAACAAGTTATTGGATTTTTAGTCGGAGAAATAGTTGGGGAATACAAACGTTTAAAACTTCCTTACTTCATCCCTAAGACAGCATTTGTTAAACCGACCAAGAGCGAATCAGCTTACTCGCCAGATGTGCTGCTACTAAACACCCGTAACTTAGCCAATGAACCTCTGTGGAAAAAAGAGTCAACTGTATCGGATGCTGCATCAGTTCCCTTAGTCATTGAGGTAGTAAGTACCAACTGGCACGACGATTATCATAAAAAACTTGCTGACTATGAAGAAATGGGTATTCTTGAATACTGA # Questionable array : NO Score: 8.30 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TAGCGATTCCCGGTAACGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.60,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0.41 Confidence: HIGH] # Array family : NA // Array 1 115-1767 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000041.1 Scytonema sp. UIC 10036 c00071_NODE_71.., whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 115 36 97.3 35 ....................-................ CCGCACCTGCATCATCGCGATCGTATATCTTGCCA 186 37 100.0 37 ..................................... CTTCTGACCATTCAAGCTGACGACCAACTGCTTTTTC 260 35 94.6 39 ....................-.....-.......... ATTCTTCACCATTCAACACTATACATACCTCATCTATAG 334 36 97.3 38 ..........................-.......... ATTGAGTGGTACGCATACGAATCAAAACAAGCTTGTAA 408 37 100.0 36 ..................................... TAATTGTTGTAATGATTTACAACAACAAATCAATGC 481 37 100.0 33 ..................................... GCTACGGGAGCAGAATCAATCAAGAAGAGTCTG 551 37 100.0 38 ..................................... TCAAAAGCTGACTTTACAGCTAGAACAGACTCTGCTTG 626 37 100.0 37 ..................................... CTCCTATCCGTAGGGAGTGGAAGTCTTTGCCAAAGGA 700 37 100.0 39 ..................................... CAAAGAACATATCAAGCGTCACATTCAATATTACGGCGA G [712] 777 37 100.0 36 ..................................... GGCTTTTACACCTACCTGTTACCTTTTTAATTTAAG 850 37 100.0 40 ..................................... TAAACCTGGGGATTTCTACTTTTTCACAGGGACGCTTCCA 927 37 94.6 37 GC................................... CAAATTTACTGTTACTGTTAAGCGCTTAACACTCTAA 1001 37 100.0 35 ..................................... AAGGAAATTTCGCATCTTTCTTGCCCACCCACCTA 1073 37 100.0 35 ..................................... AATCTTTATCAGCCTCATCGCTCGTTCTTTCGATG 1145 36 97.3 41 ..........................-.......... ATGATGCGAATCGGCATCCTAGAACTGCCGAAGATGCAAGA 1222 37 100.0 33 ..................................... TTTAAGTCAGAGCGGTAAGACCGTACACGCTTA 1292 37 100.0 36 ..................................... GATCTAGACGCGCATCGCAAACAAATTAATTTTACA 1365 36 97.3 37 ..........................-.......... TATTATCTCAATTTAGTTCTATAGAAAGTTTATTAGA 1438 37 100.0 37 ..................................... GTATAAGCTTCAGACCCTTTTGACACCACTTTTGTTT 1512 37 100.0 37 ..................................... TTCCTATATCAGCTAATTAGAGATAAAATTCGAGAAT 1586 37 100.0 37 ..................................... CGCCAAAGAGCACAAAGCTTAAATGTTGTACTCTTTG 1660 37 100.0 35 ..................................... AAGTCGAAGATTGTATCAATCAGCCGCTAAACATT 1732 36 86.5 0 ..........................-.T.G...TT. | ========== ====== ====== ====== ===================================== ========================================= ================== 23 37 98.5 37 CTTGAAACGTAGCGATTCCTGGAAACGGGACTGAAAC # Left flank : AAAACAATTTATTTTTCTACCATAATACTTAATACTATATTCGCCTTTTTCTCGTGGGATTGGAGAACTGTATAATATACAGACAGCAGGTACAGCCCAGTTAGCATCACTAAGC # Right flank : CTCGGCAACGGGACTGAAACACATAGGCAACAATAAGTACAACTTGTCAACTAAGGAGCTTTCAATCTGCCACCAAATCTGTGATTATAGTTGCAGGCTTGCAGCCCCTTAACAACCCCGATGGCTAAGCCATTTTGTTCAAAGAGACTTTCATTTCCAGATTAATGACCTTTACCTTAGACAAATCAGTAGATTGCTTAGCTTGCCAAAGATCGTACTGCTGTTGCATATTTAACCATAGACCAACACTGGTATTTAGTGCCTTAGAAAGTCTTAAAGCCATAGCAGGACTTACTCCAGCCTTGCCATTGATGATCTTGGACATATAAGCCCTGTTCACTCCAATCATGTCGGCAAACTTTGAGATACTAAGACCATAAGGCTTTAAAAACTCCTCCTTTAAGACTTCGCCGATGTGTGGCGGCTCGTACATTTGTATTCTTTCTTTTGCCATAGGTTTTTACAATTAATTTTTAAGCCAAAGAGATTATTCATTTTTC # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGAAACGTAGCGATTCCTGGAAACGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.30,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 11363-11687 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000052.1 Scytonema sp. UIC 10036 c00087_NODE_87.., whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 11363 36 100.0 34 .................................... GATAAATTATGTTGGCAGAATTAACAGTTATCAC 11433 36 100.0 36 .................................... ACTTGAACAATACCTCCCATATCAGCACCTTGAGCT 11505 36 100.0 36 .................................... GTTTTATATTTCCAACTCCTAACCCCAGATGACGAA 11577 36 100.0 39 .................................... AATACGGTAATAGTACTCGCCTGCCCATGCCTTTAACGC 11652 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 5 36 100.0 36 CCCCACCGATTGGGTTAATTCGGAATAATTGGAAAC # Left flank : CCTCAACCCAATAATGCATAGATTTTGCGGAAACAATAACAATCAATACTACGTAGGTTTTGCTAAAAACTCAAATTCAACGGAGGTTGGGTTGAGGAACGAAACCCAACATTTGCAGACATTTGTTGGGTTTCCCCACAGGTTTACCCAACCTAAAAAAATTCTTATTCGACCAGTATTGCAGGAGGGATATATTTGAATCAATCTTCTAGGCGCGTTTTCCTGAAACATATTGAAACCCGTATGAATGAAAAAACATCCTACCCAGATTTACAATCTCAAGTTACCTATAATTAAAAGGGAGCTTTTACCAGTTCATCTACACACCCCGGCAAATCGCTGAAACCCTATATTTTTCGTTGAGGTGTGTCGATTGCTTGCTGTGTAAGGATTTGAAGTATGTGTTTTCCTAAATTTTCGCTATTGTTTTACAATGTTTTTTAGAGGTGTGTCGATTTGCAGCCTGGAACCCTTACTGGATAAGGGCTGCTAGACGAACT # Right flank : CGCTGGAAGTGGGGCACGAACATCTGTTTTTTCATTGACCCCACCGATTGGGTTAATTTGTTACTTTACCTATAAATTTGCACAAGGTGGAAGGATAAATTTGCACAACTACGTCTGAAAGCTCTATTTTTTGGTTATGCGATCGCTACTTTTTAATGAGGAGTGGAACTATAAATTTGCACAAAGTATAAAAACGCCGACAAATCTTGGCACAAAATAAACAAAAATTATGTCAATCAATCTCACCAGCGCCTGAAGTTGTAAAATGAAAACAGTCTAAAATCAAGGTTTTGGTGCTACTAGATTTTAGCACCTAAGTGAAAGCATAAATTGGCACAGTCAAAGTGGAAGCATTAAATTACAATTTTGCCAATTTATGGTTCAAGTAACATAATTCGGAATAATTGGAAACGTTCTTCATTTCCTTATAATTGGAAACTGCAATACCATGGCAATACTGCAAGGGCTGAGAATTTTTGTAGGTTGGGCAAACCTAACAA # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCCACCGATTGGGTTAATTCGGAATAATTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.90,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [50.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 419-99 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000056.1 Scytonema sp. UIC 10036 c00095_NODE_95.., whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 418 36 100.0 36 .................................... CCGTTAAAACTGCTTGCCGTAAATAATCTTCTGATT 346 36 100.0 35 .................................... ATTTTATGCGTTGGCTTGGTATTTTAAATGAAGAC 275 36 100.0 35 .................................... TTATATTTTCTGCATGCTAGCATTATTACTTATAA 204 36 97.2 34 T................................... ACAAAATATTGTATTTAATAATATTCCTGATTCA 134 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ==================================== ================== 5 36 99.4 35 AGTTTCCATTTTGATTCGACTTATAAAAAGCCAAAG # Left flank : TTCGCTTAACGGCTTCAGCCGTATCGTTATGAACCTTGGTAAAGGCGGCGATCTTCGGTTTCATGCCAAATTTATAGATGGAGTCTTGTACTGTCCTGGTTTAGCAACAGAACATTAATTCCAAATCAGATATGAGTAATATTGAATTAAAAAATCACCCAGTTTGGCATGATTTGACTGATATATTACAAAACATAGATTCACTACACTTGTTAAATAACATCTCTCTTTATGTAATTATAAAGTGTGCGGTTATTGGGACGAGCAAGATAAATATTATGAAGAAATTACCCTACCACGCACTGTTGATGCTGAATTAACTAGTAGTTCTATTGGCGTAACACATAATAAACTGTGGGTTCGCACATTTATACGTACTTGAAGTGACAATCTTATCATAATGAGGTTTTAAATAGCGCTCCCACGGTCTAGGTAAATGTTGAGCTAAGGGCTTTCCAAGAAATAAATTATCTCGTGGAACGGGCGTAGTACATGTAGTA # Right flank : GCTGTATCTATTATGACCCACAAATAAACATATGAAGATGAAGAATAATATTTATATTTAGATATAGAAAGACAAAGTATAATTAAATATAAATTAGTT # Questionable array : NO Score: 3.03 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTTTCCATTTTGATTCGACTTATAAAAAGCCAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 24416-25940 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000058.1 Scytonema sp. UIC 10036 c00098_NODE_98.., whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================ ================== 24416 36 100.0 35 .................................... TTCCTCATAGCATCTTTTCAATGCGTTGATTAAAA 24487 36 100.0 38 .................................... TCGCTGATGTCCTCGTTGACGCCATATATCTCGGCGTT 24561 36 100.0 37 .................................... GTGAGGAGATCGTGAGTTTCCATCTCCTTCCCACTGG 24634 36 100.0 39 .................................... GGAAGCCGAACGAGCCAGATTAAATAATGCAGCCCTCAC 24709 36 100.0 36 .................................... CTTTCAACCTCGGCTTCTGCTTCATCCATTGTTAAA 24781 36 100.0 39 .................................... CAGACGAAGAGGGAAATCTTTGCTCCCTACTCACTCACA 24856 36 100.0 37 .................................... CAGCAAATAATTGATAGCTATGCAGCGATTAACCGGA 24929 36 100.0 37 .................................... ACGACTACCATCGAGTTGTGAAAGAGGCGACGTTTTC 25002 36 100.0 41 .................................... TCACCAAAATCTGCCAAGACTTCTTCAAAGCCATTCATTAA 25079 36 100.0 40 .................................... AAGCAGCGATCGCGACCCCGCTTGGTTCGGCAAAGAAAAA 25155 36 100.0 38 .................................... GGGAATGACTTTAACCAATTGATAAGTCACCACAGATG 25229 36 100.0 37 .................................... TATTCGGGATTGACCCAACAGCAAATCAAGGGGGCGA 25302 36 100.0 44 .................................... GACTATATATATACTGATTCATAGAAGGGAGGACAAGCCAAATG 25382 36 100.0 37 .................................... CTACAGCTACACCTCATGGTTGACTGCATATCTCAAG 25455 36 100.0 36 .................................... GCAATGGTTTATCATTGCGAGCTTTATCAATTCATT 25527 36 100.0 39 .................................... AGAGACACAAACAATCATGAACGTAATGCCAGTTTCCAT 25602 36 100.0 42 .................................... TACATCTAACCCCAACTTTGAGTGGGAGAAAAACACCCGTCG 25680 36 100.0 41 .................................... GACAGTGCATCTCGCGCATTATCAGCACCTTTTTTGAAGAT 25757 36 100.0 39 .................................... ATAATCCCATCTTTTTTGGCTTGTGCCTTGTCGTATAAG 25832 36 97.2 37 ....................T............... CTAAAAATGATTTGTCCTCTCATATAAGCTCCATTTT 25905 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================================ ================== 21 36 99.9 38 GTCCCTACTCGCTAGGGAAACTAATAGATTGGAAAC # Left flank : AGTCATACATACCAGCCTTACTTAATTCGTTGAGTTCATGTTATACGTGGTAGCTTATGATATTCCTTGCGACAAACGGCGCAAAAAGGTATCAGATTTGCTAGAAGGATATGGCAAACGGGTACAGTACTCGGTTTTTGAGTGCCAATTGCCTCCAAGTAAGTATAAAGAACTTTGTCAAAGGTTCAAGAAAAAGGTAAAACTTGCAGAAGACAGCGTGCGGTTTTATCCTTTGTCTCAGCATACTTGGGGACAAGTGGAAACTTGGGGCGTTGGTCCCCCTGTCACAGAGCTACCTGGTTCGATAATCGTCTAATTAGCAGCGAGCGGGTCGGGAAAAGTCTGAAATACTGATTCTTTCGTTGACCCCCTCGCCGCCTTGTCCTGTAAGCGTTTCAGCGATTTTTATGATGACTTTTTTCCCTTTTCTCGTCTCATTTTCTGACCCCCTCGCAAACTGCCTCTGGACTCCTTACGGGGTAAGGGTCTAAACTAGAGGG # Right flank : CAATCGACGAAGGTATTGTTCTTTGAGACCCAATTCTTGCCATTTATGCTCAAATTATGTATATTTTAAGTGCATGATATGAGCAAAAAGGATGAAGCATGAACATCGTTTTTTCAGATGTTGATGGGAACTACATTCGCCAGAAAGTAGAGAGCGGCTATTATAGCAACGCTACCGAACTGGTTCGCGATGCCGTGCGGCGATTGCGGGAGAATGAGAAAGCATTGATGAGAAGTAGGCAAACCCCGAATGTGGACGATCTCAATATGGGGTGTTACTTAAAGTAAAAAGTGGCAGTTTTAAAACCATAGAGTGGCAGCAGTCAAAAACTTTCAAAAACCTATAGTGTTCGTGTATTTGAGAGATTTTTGCTGCTCGATCGCTTCAAAATTAATGTTATGAAAAGTTCGAGAACCACAGGAAGAATCGATTATGAATCTTACTGAGTTGCCAGGGGCAGAATTCGTTTTACCAGGAATAGACGATCTTCACAATGGCGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCTACTCGCTAGGGAAACTAATAGATTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,-0.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 24592-25285 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000062.1 Scytonema sp. UIC 10036 c00105_NODE_10.., whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 24592 37 100.0 35 ..................................... GCATCGGTGCGATCGCTGCTCAATATTCCCGATAG 24664 37 100.0 36 ..................................... TTGAGAATATGCCATCACTGCCTGACACCGGGCTTA 24737 37 100.0 38 ..................................... TCCACTATTTACACGAGTGGTAAGGAATTCCTGTGTAT 24812 37 97.3 39 ...................A................. TCAATTTAATTTATATCGAGGATTATATTCTCGATAATG 24888 37 100.0 35 ..................................... CATCGCAAGGTGAAGCCGTAGAAATTCCCCAGTAC 24960 37 100.0 35 ..................................... TCTAGCGTTTGTCCTTGGTGGTTTTGGTGGTTTGG 25032 37 100.0 34 ..................................... CAATTTATAAAAAGTACCGCGCTTTATTTGATTA 25103 37 100.0 37 ..................................... GAAGTTGAAACTTTAGAGCAACAAAACACAAGACTTA 25177 37 97.3 35 ....T................................ TCTTTTCCTGCTGCCAACAAAGCGCTCGTTGAGTG 25249 37 83.8 0 ..................TA....T...A...A...G | ========== ====== ====== ====== ===================================== ======================================= ================== 10 37 97.8 36 GTTGCAAATTATACGAATCCCTATCAGGGATTGAAAC # Left flank : ATTTTTCAGATCGGTATTAGCAGAGAGTCCGTATGGATTGGTATTAAGTCCCTCAGAAGCAGTAGAATTACAGCAGAAGCTCATTGCTCAGTAAAATTAATATGTGTAATATCTGCGTTCAGCATGATTTATATAAATTACAATTTTCAATCTTTAGGTTTTAGTGTAAAAATCAAAAGGGGAAAACTAGGGGACTGGAAACATTAATCTTGGCTATTAGATCGAGTCCAGTTGAGCACCTAACGTAATCAAACTATGGCGGTTTTCAATTGAGTGCAATACATGAAATAATTAAGGAACCGCAGATGAACGCAGCCTGTAGCAGATGAACGCATATAAATCTGTACTTCATTCAAGTGAGAACCGCTATATACTCAAAGGATAAGATAAATATAGTACAGATGTTTCAAAAAGCGCGGATGGGTAGGTGTTCAAAAACGAGTAACTTAGAAAAGCCTTTCTATGCACACCGGATCGACGCAAGAAATCGGCATGCTCAG # Right flank : GTCGATTGATAACGGGCGATCGCCTGAAAAATATAGCGATTCTCACTTGACTGAAGTACAAATTTATCTGCGTTCGTCCGCGTGCATCTGCGGTTCCATAACTATCATTCACCAACAGCATCATTAAAAAAGTAAGGGATCTTGCAGTTCCTCACTATCAAGTGTAAGTTGTCTTTTTTATGGAATATGCATCTTCCAGCAGGAAGTATGATAGACCCATGAGTTCACAGGTTAATGAAATGACGACTTACAAGATGGAACTGAAAGACGAGATTTTGCGAGTCAATTTTGGAGAAGCCGCCCAAAATGACCGGATTGTACAAGACACTAACGCCCGTCTCGAAGAAATGATTGACTCAGGCGAACTCATCGGAGGACCTTTACTTAAGGTTAACGGTCCTGCTTCCATACCAGTAGCATTTGCGATCGCACATAAAGTTGCTCACCTTTATGGTGCAGTTGGTTGCTTTGACCCCAAGTTAGGGAAATATGTGATTTGT # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:0, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAAATTATACGAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 5052-4287 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000071.1 Scytonema sp. UIC 10036 c00116_NODE_11.., whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 5051 37 100.0 32 ..................................... ATGAGGCGGCGCGGACGGCGATCGCTAAAGTG 4982 37 100.0 33 ..................................... CTGATGCTATTTCTATAACTGGAACTTTGTAAA 4912 37 100.0 34 ..................................... TAACAGATCGGAAATTATATCTGACATAAAACAC 4841 37 100.0 39 ..................................... TCAATCTTGAAAGCTCTACTCTTTTCAATTGTCCCAGGC 4765 37 100.0 34 ..................................... AACATTAATACAATGCTCAAATACGGTACGATCG 4694 37 100.0 39 ..................................... AAGTTTCCGTACAGACTGACAATTGCCGAATCAATGGCG 4618 37 100.0 40 ..................................... GGAAATTCTACTGAATAGCTCGTGAAATGTGCCATAATGT 4541 37 100.0 36 ..................................... CTGCTTTTTCATTAGACAGCTTGCTGGAAATACCAG 4468 37 100.0 35 ..................................... GGAGCAGAAAACTCGCGAGGGGATAGCTTGGGAGA 4396 37 100.0 36 ..................................... GCAAAAAAAAGGGGGAGACGGACTAGATACCGTCAA 4323 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 11 37 100.0 36 ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC # Left flank : GGATAACTCACGGTCTAAATACCAGATATGAGAACGAGTGTCTCCCGCAAAGTTGCTTATTGCCAAGCCCAGTTCGCGAGTGGTAGTGTGGAGTGCTAATCCGTATTTTGTTGGTGGCAGGTGTTGTAGTTGAATGGTCAAGCTGAGTTTAGATTAAAGATGTGCTTTCATCCCGTTGCCAGGATTCGGTTAACTTAATAATGATACAAGAAAATTTTCTGCCTCTTCATAAAAGGCTATACTGTTCGCAAAAGTGGTAACTACTGGCAGTTAAGCGCGGATGGGTAGGTGTTGAAATTCACCTTACAAGAAAAATAGCCGTATTCCTTTTGGTACATGACATAGCGGCGAGCGTACCATCCAAGCCATCCGCGCACCTTACCCAGCCTTGATTTCAGCCATTTTCCCTCTAGTCAATCTCAATTTCTCGTGCTATGATTGAGCCATCCGCGATTTTGAACCATGACAACCAAATACCGATTGAGTTCCAGGCTCCTGCC # Right flank : TGAATCCTAATACTTTATATTCATAATTTTGAAGCGAAAAGTAGATTTTGAAAAGTTTTTTAGTAATTCAGTACTAGAAGAACTGGTATACGGGTAGATTAACATTAATTTGTATGATAAGTGTGTTTCTATACATTTTTAGACTCTGTTCTCTATGTGGAAGCACGTTGTGGCAGTAACTGCCATCAAGTGGTTCCAATACTGCAAGGGCTGAGGAAATTGTAGGTTAGGTTTACCGTGTGTGAAACCCAACAAATGTCTGTGAATGTTGGGTAGAGTTCCTCAACCTACTTGGTGGATTCAAGCTCTTTTTTGGCACCATCGCAACAAATGTCTGTAAATGTTGGGTTTCGTTCCTCAACCCAACCTACGTATTTTCGGATTTTTAGGCTTAAGCAACAAGTATTGCAAGTGGTTCAACTCACAGCTTGATGTTCAGGGAGAATATTTGAGGATTTGAGTGTTTACAAAACAAAAACTTGAGACATTGTCCCAAGTTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTTCATTTACTCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.50,-5.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : NA // Array 1 30261-28467 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000081.1 Scytonema sp. UIC 10036 c00127_NODE_12.., whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 30260 37 100.0 42 ..................................... TGCGGAAGCGGCAGGGGTGAGGGTAACGATATCAACGGTACC 30181 37 100.0 38 ..................................... TTTGCGATCGCGAATTACTCCACAACGAGTAATTCCGG 30106 37 100.0 37 ..................................... ACGATTGCCCTTTGTATCGGGAATTATACTCTAGCTG 30032 37 100.0 33 ..................................... TTGATGCCCTTGAAAAAGAGTCCCAAAGGGAAA 29962 37 100.0 34 ..................................... TTGATTTTTTCCCAAGTTCGGCGGCGGCGGAAGA 29891 37 100.0 33 ..................................... GAAACTGTTAACAAAATAGGACATGACCTGCAC 29821 37 100.0 35 ..................................... TTGTGTTGTGTTTGTGTTTAAATTGTGCTAAGCGG 29749 37 100.0 35 ..................................... ATGCCGAATACCGATAAATACATATTATCTGTGGG 29677 37 100.0 33 ..................................... CAGCGAGATTTAATTTATCAAGCATATTGTTAT 29607 37 100.0 34 ..................................... TCATAATGTTGCTATTGCTCCTTTAATTTGTTCG 29536 37 100.0 34 ..................................... GGCAAAGGAAGCTTTAAAAATAGCTTATAAAGCT 29465 37 100.0 37 ..................................... ATTTATTTTTGTGGGCAACGAAAGACCATTTACAGCT 29391 37 100.0 38 ..................................... GCTTCTGCCTAGTGGTGCTTTTCTAAAACAAAAAAAAC 29316 37 100.0 38 ..................................... AACTGACAAGAGGGGAAACAATGAGTTGTGCCAATGTA 29241 37 100.0 35 ..................................... TTCTGTTGCTGCAACGACAGGACAAGTCCTTAACT 29169 37 100.0 33 ..................................... TGTATGGACTGTACCAATAAAACAAGACGAACT 29099 37 100.0 35 ..................................... AAACTATTTTCTTGACAGCTTGTGCCTTATTCCAA 29027 37 100.0 35 ..................................... GCGCAGTTGCTCGACAGTGTAAATCCTGCGTTGCC 28955 37 100.0 39 ..................................... GACAAGCTCGCGAGCATCAGAAAAGCTGGGGGCGAGGCA 28879 37 100.0 36 ..................................... GATACATTTAACTTTTTTCCGTTGCTAATAGCGAAT 28806 37 100.0 36 ..................................... GAAAATTACGAGCAGGGCAATATGGTACGCTGTATT 28733 37 100.0 41 ..................................... ATATGGAGCAGCTATATTACAGTAAATTGCAATTTGAGAAA 28655 37 100.0 37 ..................................... CAATTCTGCCAATCGCAAAGTCAGGCTATTTGCCAAA 28581 37 100.0 41 ..................................... GAACTAAGCTTCAGTGGAACCCTTACCCAGGATACAGCGAC 28503 37 89.2 0 ...........................AT.....GC. | ========== ====== ====== ====== ===================================== ========================================== ================== 25 37 99.6 36 GTTGCAACTTATACTACTCCCTACTAGGGATTGAAAC # Left flank : ATTCCTAATTCATCACGTAGAAAGGGCATCAAAGGACCAAGAGCCGCTTGTAGGTAGGAAAAAAAAGCTGTCATCAAGTAAGCCAGCCAGGTGAAACGATCCCGTGCAAATGAAGTCCTTGAAGACAATATCTTGCTCCTGAAACCAGGAAATCAGAATTCTGATTATCTTAAAATTTTGAGGTTAGTGGAAGCACCAGTCTAGGGAGTGTTTTCAAAATCGTTGTATTCTAATAAGAACGCTATAGCAACGGGATGCTTCGCAAGCATGACTGCGCGGATGGGTAGGTGTAGAAAAATCACTTCTGAAAAAAAGTGCTTCAAACCTTTGATATGTAAGGATTTAAGTCCCTTGAAAAATAAAAACAATCCGCGCTCCTTACTAAATAAGCTTTTCAGCCATTTTCTCTTGTCATCACCATCTGCGATCGTGCTATCATCAAACCATCCGCGCTACCGCACCTAGAAAACTATATATAGTCAGTTTTTCGACTCCCAGCA # Right flank : GAGATACGTGTAAAAACCTGCAAGATGGTCTGGAAACGCCTGCTCTACCTATGTTTCAGCAAATTTGACCTATCGTTTTATAATGCTTCCCGCATACTAGACAAAATTTATACCTTAACGACACTACTAACTCACCAAAGTGAGCGCAACTAGGGCGTAGTTGTGTCCCACAAAGATAACAATACTTAGCTTTAACGTTACTCGTACAGCATATCCTAAATTTAAACAATTTCCCGACCCTAAAGAACTTGCAGAACTTTATACACCAACAGAGACAGAAATTAAGCTGGTAAAGTCCAAAACTAAGAGTCATGAAGGGTCGAGGGGAACATAATCCCTAACTGCTCACGTATCATCATGATTTGACTCCCATTGTGTCGTCTTCCGTGCTAAGAGGAGAAACTCTCTTATTACTGGTGAGGAATCATGCTGCCGCCAAGCCAGATAAAGTCCGGTTTTAGGGATCTGTTCTTGTAAGGGTCTGTAAATGACTCCGCTTC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:0, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAACTTATACTACTCCCTACTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.50,-5.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 2 37171-35805 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000081.1 Scytonema sp. UIC 10036 c00127_NODE_12.., whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 37170 37 100.0 34 ..................................... GCGTTAGTATCCGATACCAACGCACAACTAGCAG 37099 37 100.0 36 ..................................... ATAGTGATTGCAGTTATTTGAGGAGGTAATAGTGAA 37026 37 100.0 39 ..................................... GCAACATCCAAGCGCTTAAGGATATTCAACCATTACCTA 36950 37 100.0 38 ..................................... GTGGGAAAACAACTCAAATAAGCTTGTGTTACGACTGG 36875 37 100.0 33 ..................................... GGCGATAGTTTTGGGATTGGACTTGTCGCCCAG 36805 37 100.0 38 ..................................... AAGAATCCAGAGTACTTAGAGACAATAGCACAAGCTTG 36730 37 100.0 37 ..................................... TGCTGGCATCAAAAACAAGAACGGTGAGTTAACCAAG 36656 37 100.0 39 ..................................... AGCATATAAAAGCAGAAAAAGATCGTTGCTTTTGCGAAG 36580 37 100.0 36 ..................................... GGGCGATCGGTTTTCTGTCCCACAAATAGTCGCCAG 36507 37 100.0 33 ..................................... CACATATTCCCAGGATGCGATCGCCACGTTTCC 36437 37 100.0 37 ..................................... CATGAAGGTTGGAGCCAAGTTATAAACCTCAGCGATA 36363 37 100.0 38 ..................................... ATTAAGAGAAAGGCATAGAAATCATGAAAAGAACACTC 36288 37 100.0 40 ..................................... AATCCTGGAGGACCGTGTGAGGGATGTAAGGACTATGAGC 36211 37 100.0 34 ..................................... AGCAGCTAAACTCAACTCGCAGAACGTTGGAAGG 36140 37 100.0 38 ..................................... TGTCCATCGCGAGACGGACAATAAAACTGGACATCTAC 36065 37 100.0 39 ..................................... AATGAATATTTTGAATGTTTCATAGAGATAGACTCAGGA 35989 37 100.0 35 ..................................... GCAATAATAGCGATACCAGCCAACACTGCACCAAA 35917 37 100.0 39 ..................................... CTAACTCATCTCGTATTAGGAAGAGAACATATGGGAGAG 35841 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 19 37 100.0 37 GTTGCAACTTATACGAATCCCTATCAGGGATTGAAAC # Left flank : AGGTAGGGCTAAAGCCCACCTCAATATCATTATTTTTATCACGCAAAGACGCAAAGGCGCTAAGAAAAAGGCGAGTAATCCTACTGGAAAACGAGCGATCTCGTGCAGACCCAATACTACTCGGTTAAGTTAAAAACTCAAGTTCAACGTAGGTTGGGTTGAGGAACGAAACCCAACATTTACCAGCATTTGTTAAGTTGAACGAAGCGCTCAACCCAACCTACAATTTCCGAGAGCCCTTGCAGTATTGCGTGCAGACCTACTTTCATTCGTGCGCGGATGGGTAGGTGTAGAAAAATTAGTTCTTAAAAAAAGTACTCTAAAGCTTTGATATATAAGGTTTTGAGTTCATTTCAAAACAAAAACCATCCGCGCTCCTTACTAAACAAGCTTTTCAGCCATTTTCTCTTGTCATTACCATCCGCGATCGTGCTATGATTGGATCATCCGCGCTACCGCACCTAGAAAACTACATATCGCAAGCATTTCAGCTCCAGGCA # Right flank : CCCAACGGCTAGACACGTCGTATGGTTTCTCGAACGATCCCAATCTCACCAACTTTCAACCACCTGTTGTGTTCGGAACGCTCACAAATCATTGTTTGTTTCCGATCGCGGAACTTTGTTGGGAAAATCGTTGTTTCATAACCCTGAAAGTGAAGCTGCCAGTTTGTTGGATATGCACCGATTTGCCAATGCCCCACAGGCTGGCGATCGCGCACCTGATGTTTTGCTATCGAATGGGAGAACGTTGTTTGAACTATTCTGTCAGACAACATCCCATGTTCTACTGCTATTTGATGGCACCTCACTGACTAACGTAGGCTATGACAATCTGATTGAGATTGCCAAAGTGGTACGAAAACAGTGGCTGAATCAAATTAAAGTTTATGGTGTTGTACTTGCGCCGACAGCACCCCGTCCAGAAACCGAGCCTGGTTCCGTCTTGCTCGATCCAGAAAAACACTTGCATATGCGCTACGGTGCAATTGCCGAATGTCTCTACT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAACTTATACGAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [50.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 1 702-519 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000088.1 Scytonema sp. UIC 10036 c00143_NODE_14.., whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 701 37 100.0 36 ..................................... ATAGGAACTAGCTCTACATATTAAGGAGGATAAGTG 628 37 100.0 36 ..................................... TAGCGATCGCTACTGGCAAATCATCGGCATCTCGAA 555 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================== ================== 3 37 100.0 36 CTTGAAACGTAGCGATACCCGGTAACGGGATTGAAAC # Left flank : ATAAGTGAAAACAATAGAAATAATTGAACAACAATTTCAAACAATGGATGAATTGCGTAACCGTTCAGGGGGGTGATTGGTTGAACTACAGATAGCCAGTTTGAGGAAAAGTGTTTACAACCTCAAAGAGTTCGATTTAAATAAATTCGATCGCGATGAGATGGAGTTTTTGCAGCTTGATTCTTTAGTTGTACGTGCTTTGCGGTTGTGCGACCAGCGAGCGGTACAATTAATATGAAGATATCTAACCGATTCTGGACGTTGGGACGTAGTGCGTCTACAATGTTACTAGATTGATGTTTGGCAGAACGAAGCGGGAGCTAAAACTTGGGGGGTTCTGCCAAAATCGCCAGAACCTAGACAAGTTAATAGTTACAGCGTTTTGATATTTGACACTATTGATATTTTGTGTCAATAAGCGAGCCGGAAATGAGGTCATTTTTTCGATCTGCCAAAACGGCTTGTAGAGTCCTTGCTCTGTAAGGGTTTCAGATGGCGGC # Right flank : TTTTAATGGTCACCGCGTTCTGGATCTCGGCTGCGGCTCGGGCGTGCTCGCCATAGCGGCGGCGCGGGTGTTGCCGCGCGCCACGATCATCGCCACCGACATGGACCCGACCTCCGTCGCGGTGGCGCGGTCGAACATGGCGGCCAACACCGCTCCTCACCGGATCGCAGCATATGTCGCGACCGGCTTGTCACATCCCCGGTTACGGCGAACAGAGAGCTTCGATCTCGTGGTCGCCAATATTCTATCCGGTCAGCTGATGCGGCTCGCCCGGGACATTCGGCGGATTGTTCCGCCGCGGGGCAAACTGGTGCTCTCGGGCATTCTCATCCCACAGGCGCCGGCCGTCATTGCCGCCTTTGTAGCTCAGGGCTTTGCGCTCGAACGGCACGACCGCGTGACCGGATGGTCCACCCTGACGTTGACGAAGCGCTGAAGCGCTTTTGTTGCACCCGTCACGACCAGCGCTTAAACAAGGCGCCATGTTCCAGACCTTCACC # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGAAACGTAGCGATACCCGGTAACGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.10,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [36.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : NA // Array 1 7163-6757 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000098.1 Scytonema sp. UIC 10036 c00159_NODE_15.., whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 7162 36 100.0 40 .................................... CTCCTAAAAATAAAAACTAAATAAGCATCTACGTATAAAG 7086 36 100.0 35 .................................... GGTGAGCCGGAACCGAAGTTCCGACGCTGGATATT 7015 36 100.0 39 .................................... CATTTGGTCAGCCATCAGAAAAATACGAGAACTATTATC 6940 36 100.0 37 .................................... AATGAGATTTGTCCTTTCCCTTTTTTAGGGGAGTAGA 6867 36 100.0 39 .................................... AAGTGGTGCAGTAGTAAAGTTGTATTTTTTTCCTGACTG 6792 36 97.2 0 ....................T............... | ========== ====== ====== ====== ==================================== ======================================== ================== 6 36 99.5 38 CCCCACCGATTGGGTCAATTCGGATTAGTTGGAAAC # Left flank : AATTGCTTGTACTTCAGTCAGATCGGACCACTTTGCCTTACTCGCTGCTTTATACCAATTATCGAGTGCATCATAAGAATCCCCATGTTTCTCCCAGAACTCTTTCAGCTTTTTACGACTGATGACGTGCATTCAACTGCCAGGATTTGTTTCTCTTCCATTCTCTCAAAATGAGAGTAAAATGTCAAACTATCTCATGGAAGCGCCATGGAAGCGGTTTCGAGGGAGTAAACTATTGGTGGAGAAGCATACCAACCACTGCTCAAGTATTCTGTTATCCAGATGTAACGGTTTTTGGAAAGCCACTTTCAGATGTTCATCGACACCACTCGCTGAATTGCTGAAATCCTATATTTTTCGTTGAGTGGTGTCGATTGCTTACTAGACAAGGGTTTGAGCTATGTGTTTTGCTAAATTTTTGGGAGGATATACTATAATTCCATCAGTGGTGTCGATTTGGGGTCTGGAACCTTTACTGGGTAAGGTCTCCTAGACGAACT # Right flank : AATTGAAAACTTCAAAAGTCCTATTAACAAAGCGACAGGTGCAGCAAGTAACAACCACATGGTATTTTGTAAACCATAGTGTTGAGCAAGCAAACCCAACGCTAGTGGCATTAAACCACCCACAAAACCAAATAAGTTACTCAATGTCATGACTGTACCACTCTGTCCTGGCATTGCTGTATACAATTGTCCTTGGAGAATTGAGTACCAACCTGCATTAAACAAACCCAGTAAACCGAGAATTAATAACTTGATATTGATGTTTGGTACGAGCAAAAAAGTCGGGTACAGAAACAAAACAATTATGGCGCTTAATTTTAAGTAAGCAATTCCCCTCACTCTTTCTAGCAAAGGAATGAGCAAAAAATCTCCTAGCAAGCCAAACCCCAACCAGATAGTGATAGCAAAACTAGCCTGGGTATTGCTTGCACCAATAACATCAACAAAATACAGTGCCAAAAAGCCATGCAAAATATCCAGCATTAAATCGGAAAATTGTA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCCACCGATTGGGTCAATTCGGATTAGTTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [9,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 22644-22326 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJFC01000098.1 Scytonema sp. UIC 10036 c00159_NODE_15.., whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 22643 36 100.0 32 .................................... TTAGTGCGGCTACTGGGTGGTATACCACCCAG 22575 36 100.0 38 .................................... GTTAAACATTAGAGACTCCTTCTTTTTTTCCTTGAGTG 22501 36 100.0 32 .................................... TTTTTAAACATGTCTACAACTCCTGAGATAGA 22433 36 100.0 36 .................................... CAGTGATCGCGCATTACTAGTTCATCTTTTGGTACA 22361 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 5 36 100.0 35 CCCCACCGATTGGGTTAATTCGGATTAGTTGGAAAC # Left flank : GTGTAAATGTTAGTGCTTGTAGTGTATGATATTCCTAATGATAAAAAACGCACAAAATTGTCCAATTTCCTAGAAGGATACGGGCGAAGAGTTCAATTCTCTGTGTTTGAATGTTTTTTAAGTTTGGAGGAAATGCGGCAACTTTACGAACAGGTGAAAAAATTAGTGAAGCCAGCAGAGGATAATGTCCGATTTTATTGGATATCTCAGGAAGCTGTGTCCAGAGTGTTAACTATTGGTGGGGAAACCCCCCAACCACCGCCAAAGTATTATGTTATCTAGGTTTGAGGGTTCTTTGAGGGTTACTTTCAGATGTTCATCGACACCACTCGCTGAATCGCTGAAACCCTATATTTTTCGTTGAGTGGTGTCGATTGCTTACCATATAAGGGTTTGAGCTATGTGTTTTGCTAAATTTTTGGGAGGATATACTATAATTCCATCAGTGGTGTCGATTTGGGGGCTGAAACCCTTACTGCGTAAGCTCTCCTAGACGAACT # Right flank : TTTGAGTGTTGTTCCGCAGAAAAAGTATTACTCTGCTAAAAAGAAAAGCCATACCTTTAAAAATCAAATTACTGTTCTACCTAATGGTTAAGATATTGTTGATGTGATTGCTGGAGAACCAGGAGCAAAAAGTGACATAACTTTGTTTCGTGAAAGTCAGAAAGACTTTGAACCCAATCAAAAATTTCAAGGTGATAAAGGTTATATTGGAGAGCCATCAATTAAAACTCCTACAAAAAAGCCGAAAAAAGGAGAATTAACTCTCTTGCAAAAAGAGAAAAATAAAGAAATGGCATCATCGCGAATATTTGTTGAACATTTGATTCGTTTACTGAAAATATTACCAGCAAGTAAATTTTGTGCGGCTGACGGCGATGGCACTTGCGTCGGTAGGGTGGGCAAAATTCCTATATTTGGCAATATATTCCGAATTCATCTGCATTTGCCTACCCTACAATATCTGGCGATCGCGCGTGATTATCCCATTTTCAACTTTTGCG # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCCACCGATTGGGTTAATTCGGATTAGTTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.40,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA //