Array 1 12322-6921 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEMUJ010000154.1 Rhodomicrobium vannielii ATCC 17100 Joined_contig_9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 12321 29 100.0 32 ............................. TCGGCGGCGGCGCGCGGAACGCTCTACGGTGG 12260 29 100.0 32 ............................. GAATGGCCTTGGCGTGGCTGGTCTCGTGTCGA 12199 29 100.0 32 ............................. TGAAGAAGTGCCCGTTCTGCGGGGGAGATGCG 12138 29 100.0 32 ............................. CGTCGGGGCGTGCCTTGTTGGGTTGGCTCGCC 12077 29 100.0 32 ............................. GATTATCAGCCGAAACTCCTATCGAAAAGAGT 12016 29 100.0 32 ............................. GCATCATCCGCGAGAGCCCCAATCTGGCCGGA 11955 29 100.0 32 ............................. TGATCCGGGAGACCATGTGTTTGTCATGACAT 11894 29 100.0 32 ............................. GGCCACGGCACCCCGAACGGGAGCGCAATGCA 11833 29 100.0 32 ............................. TAGTGGGCGTGGTTCATTTCGAGTGGGTTTAC 11772 29 100.0 32 ............................. TCGATGGGCGACATCTTCCATCCCGATGTGCC 11711 29 100.0 32 ............................. TTGATCGAGGCGCCATCGGCGGCTTCGTTCTT 11650 29 100.0 32 ............................. TGAAGCGGGCAGAGATGAAGCTCCTTGCCGCG 11589 29 100.0 32 ............................. GCCATCGCTGAGGCCGGGAAGTACTACAGCTT 11528 29 100.0 32 ............................. GTAAAGCTGATGTTCGATTTTATTCGCGCTCC 11467 29 96.6 32 ............................G CCACCAAGGAGGCCACGCCCGCTGAGGAAGTG 11406 29 100.0 32 ............................. GGGCCGCAGCGATCTGGATGGCTCGGCTCATC 11345 29 100.0 32 ............................. GCGCGGCGGCTGCTCAACCTCTATGGTGACCG 11284 29 100.0 32 ............................. TTCTTCGAACGGCCGCTGTTCGTCGTCAGTGA 11223 29 100.0 32 ............................. CCTCGCAAAACCGCTAAAACGCAAGCAACATC 11162 29 100.0 32 ............................. TCATCAAGAAACTTGCGCCGCGCGCACGACAG 11101 29 100.0 32 ............................. CGCGAAGCGCTGCTTGCTGCGCATGGTCAGAT 11040 29 100.0 32 ............................. TTGTACCAGCAGTCAAATCCGACGCCGATGAA 10979 29 100.0 33 ............................. TGGACGGGCTCCGCACTCGNGNCGNNNGNGNCA 10917 29 100.0 32 ............................. CGGTTGGCTTATCTGACGCTGGCTNTGGGCCA 10856 29 100.0 36 ............................. GAGCGGTNGNCTTANCTGACGCTATGNGCCCTTNNG 10791 29 100.0 32 ............................. GCGGCATTTGCTCGCCGACAAGGGCAAGAAAT 10730 29 100.0 32 ............................. GAGTCATGTACTCATCCGGGGTGAGGCCAAGC 10669 29 100.0 32 ............................. TGAAAATTGGGGAAATCAAGACGCAATTCCAA 10608 29 100.0 32 ............................. GTCAGACGCCACAGCGCGCGCCGTGTCGAGAT 10547 29 100.0 32 ............................. GGGATGTTGGATGTGCTTGGCTGCCGTAGCAA 10486 29 100.0 32 ............................. GATGTACTGGTCCGCCGTCTCACCAATGTAAA 10425 29 100.0 32 ............................. CTCTGAAGTAGCCCGAGGCGCAAAATCCAGCA 10364 29 100.0 32 ............................. GATGCGCGCTGTCCCGTCATAGGTGCCGCGAA 10303 29 100.0 32 ............................. TGAAAGCCAAGGTCGAAAAGCTCCAATCGGAT 10242 29 100.0 32 ............................. ACGACGCGCACGGCGAATATCACCATCGGCAA 10181 29 100.0 32 ............................. CGAAGGACGGACAGCGAGAGCTTCGCTATTGA 10120 29 100.0 32 ............................. CGATCATCATCGCCGCCATAAGGATGTACGGT 10059 29 100.0 32 ............................. TGTACGCGCCGATATTCATTGATGCTGTAGCT 9998 29 100.0 32 ............................. TCGTGACGGCGAACTTGACGCTGGTAGGGACT 9937 29 100.0 32 ............................. GCTGGCATCGTCGCCGTTCTATTTCTCACCTG 9876 29 100.0 32 ............................. GGGGCTGGCGATGAATGCACCAGTTTCGGCAT 9815 29 100.0 32 ............................. ATTAACAGCCTCGGCAAGATGATGGCCATTGA 9754 29 100.0 32 ............................. CAATCCGACAGCGGCGAGGATGAAAATAGCGC 9693 29 100.0 32 ............................. TCAGCGCTGAAGCTCCTCGGCGAAGGCATGGT 9632 29 100.0 32 ............................. TCGAAAGCGATTGGCCGACCGTCTATGTGACC 9571 29 100.0 32 ............................. GAGCCAAGACTTCTAGAACAGGTCGAGCAGCC 9510 29 100.0 32 ............................. AATCCGGGGGTCACCCGCGAGCTTCTTCCGAA 9449 29 100.0 32 ............................. CCTCGCGGCATTTAATGCGTTGATATTGCTTG 9388 29 100.0 32 ............................. GAGCGGAAGGAACGCGAAAGCATCCTCGAAAC 9327 29 100.0 32 ............................. GGGGGAGAGGGGAATGAGCGAGAGGGGAATAT 9266 29 100.0 32 ............................. CTGACTTGCGCTTAGACCCGCGTCCCAAAGCT 9205 29 96.6 32 ............................G TACCCCCATCGAAGCGGCGTGCTTCGTGCCGC 9144 29 100.0 32 ............................. TTCTTCAGGTCCGAAGAGATCCATTACGCACT 9083 29 100.0 32 ............................. CGCGTGCAGATCCTCGTAGCTGGCGAATAGGA 9022 29 100.0 32 ............................. CCTGTTTTATCTGCCTTCTAAGCAGGGGGTTG 8961 29 100.0 32 ............................. CGGTTTCGCATTGCGTGGAATACTACAAGCAA 8900 29 100.0 32 ............................. GCCGCGACCGCATCGGCCGTGCTCTCTCCGAA 8839 29 100.0 32 ............................. GCGGTTGAAGATGTTCCAGAGATTCGAGTCCG 8778 29 100.0 32 ............................. CCGCAACCGTTCGCGCGCTATCGTCTAGCTTC 8717 29 100.0 32 ............................. TCTTCCTCGAATGACTCGTAACAATCGCCCGT 8656 29 100.0 32 ............................. GCATCTTCGCCGCCCGCCAGATCGAGGCGCTG 8595 29 100.0 32 ............................. TATACGAGGATCGGCAAGGCCATCGGCGTGGA 8534 29 100.0 32 ............................. CATTCTCGGACCAAATCCGGGCAGCGCACGAA 8473 29 100.0 32 ............................. TCGTGCCGTTGACCGTGAAGTCCTCGGCCATG 8412 29 100.0 32 ............................. GTCTGGATGGCCCGCGTCCTTGTAATAGGACA 8351 29 100.0 32 ............................. GTGCCAGATTGTAATGAAGAGTGGTCGACGCC 8290 29 100.0 32 ............................. TCGCCGTTAAAGCGAGCTTCTCTTTTCGACAA 8229 29 100.0 32 ............................. TGGTGAAGCATCTGGTCACCTTCGGCCTTGTC 8168 29 100.0 32 ............................. TTTTCGCGCTCCAGGTAGTAGGCCGGGCGATA 8107 29 100.0 32 ............................. TCGGGCAAGCCCTTCGAAGCTGCCGACGCTCC 8046 28 96.6 32 ....-........................ CAGCATGTTGCCGTCCGCGTCGATGGCCCACA 7986 29 100.0 32 ............................. GTCAGGAAGGCGCGCGACGACAGAGACGAGAA 7925 29 100.0 32 ............................. CAGTTGCCGCAATTCGTCCACCAGATCGCTAA 7864 29 100.0 32 ............................. GTTTGCAAGCTGACGCGCGTTTAGGCGGATCG 7803 29 100.0 32 ............................. TGCCACGGATGAAGCCGCGCCGCGCGAGAAGA 7742 29 96.6 32 ............................G CCCGTGAGGCTCGCCAGCGTTTCGGCCTGCGG 7681 29 100.0 32 ............................. GCGGCACGTCGGGCTCGGTAACAGCAGGCACG 7620 29 100.0 32 ............................. TACCACCCCGATTTGCGGGGCCGGTATGAAGT 7559 29 100.0 32 ............................. CGCGCGCCAGACGCACCGCCACGAAGGTAGCG 7498 29 100.0 32 ............................. GTAGCCTTCTCCGCAGTGATGGACGAGAGCGG 7437 29 100.0 32 ............................. CGAGGCGGAGTTTGCAAAGGCCGACGCCGACG 7376 29 100.0 32 ............................. TCGATGGACCGGCGCGGCCGTGCGCGTATCGT 7315 29 100.0 32 ............................. AAGTGGCTGCTCGTCGGCGCGGCCGCCGTGGC 7254 29 100.0 32 ............................. GCGTGCTGCGCTTGCGGCTCTATCGACCGTTG 7193 29 100.0 32 ............................. CAGCGCACAGGCGCTGCGATCCGCGTGCGCAT 7132 29 100.0 32 ............................. GACACTTATCCGTATGAGGCCCACTACATCGC 7071 29 100.0 32 ............................. GTCGCCGCGCTTCTCGGCCTCGATGATGCGTA 7010 29 93.1 32 ................T.A.......... GATACGTTGTTATACGCGCCGGATGTCTGGCG 6949 29 96.6 0 .........................C... | ========== ====== ====== ====== ============================= ==================================== ================== 89 29 99.7 32 GGCTCCCCCGCACCCGCGGGGATAGACCC # Left flank : GGGCGAGCAAGGGGACGACGCTGCCAAGGATGAGGAAGGATCATGACCATGACCGTCATCGTCACTCGCAACGTGGCGCCGCGTTTCCGCGGTTTTCTTGCGTCGGTGATGTTGGAGATCGCTCCCGGCGTGTACACGGCGCCAAAAATGTCCAAAGCCGTGCGCGAGCGGGTGTGGACAGTGCTCGCTGAATGGTTTGATGCAGGGGCGACGGTGGGACAGCACGCTGAAGATGTTGCGTCCATTGTTATGACCTGCCTCGACAAGGATGCGCCTGGCGGGCAGCGCATCGAAACCTTAGGCTTACCGCCGAAAAAGATCGTCGATGCGGGCGGTGTGCTTCTGATAGCAAGGTTGTGACGCCGCCATTTGCAACCTTATTAGCTGGTGCATTGTGGTTCGGCGCGACTGCAACCGCACATCCGTTCTTTGAAATCGTTGATAGATTGGTTTCGGCAGATTGTCATAGCTGCTGTTTTACACAATGATCGACTGTCAGA # Right flank : TCCGGATCGCGGCTGCTTGTCCGAGACCGGCTGCCTGAGCCGAGAAAGCATTAAAGGCGGCGCCTTTAGAATACCCGGCGCAGGATGGAACCGCTGCTCGACGTGACCGTGACGATCTTCTCCTAGTAATCGGCGGTGGCCGCTTCACACGCCGTCTCAGACTACGATCGCCCACGACCGTTTTGCCGAGCTCGCGTTTCACTGAACTCGGCTTCCAGGAGCGCGATCTTGGCCCGCTGACCTTGAGGACTGTTTTCCAGCCCGGCAAGGCTCGATATTGATGACCTCGCTGCATTAACAGGCGTATCCGCCCGGAGCGCAGTGCTTTCACCGTTCTTCGCCGCGCCGTGCTCCGCCGGCTGAAGGTCCTTCTCGATCTCCGTGATCCGGGCTTTTACCGCGTTGAGCCGTTCGGCGCGGGCGAACCCGGTCGCCGTCAACTGGCGCTCGAGCCTTGGGAGATCGGCCCTGGCCTTCGACAGCTCCTGCTCTTCGGCGGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCCCCCGCACCCGCGGGGATAGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA //