Array 1 70051-68741 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ948222.1 Streptomyces yokosukanensis strain DSM 40224 PRJNA299221_s017, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 70050 29 100.0 32 ............................. CGGGTGTTGATCACCTGCTCCAGTACGGCGCG 69989 29 96.6 32 ............................T GCCGGCCTCGGCCTGGTCCTGGTCCTCCTTGG 69928 29 100.0 32 ............................. ACCAAGCGGGGAGGAAACTGACCATGGGTCAC 69867 29 100.0 32 ............................. GCGCGTGTGGACGGCGGACGTTCGCCCTGTGT 69806 29 100.0 32 ............................. GAGCTGGAGAAGACCAAGGAGACCCGGGGCCG 69745 29 100.0 32 ............................. GACCAGGCGGAGCCGGACGCCGTCACCGAGTG 69684 29 100.0 32 ............................. CAGGGTTGGCCGGTCTCGAACGTGAACGCGGT 69623 29 100.0 32 ............................. CCCCCCGAGGATCTGTACCGAGTGTTAGCAGC 69562 29 100.0 32 ............................. CGATACAGATACAGGCGCGCGCCATCAGTCTC 69501 29 100.0 32 ............................. TACAACCGGAGGGCGTGACATGGCGTCATGGT 69440 29 100.0 32 ............................. AAGACCACCGAGGAGACCCACATGAACAGCAA 69379 29 100.0 32 ............................. TCCGCGCCATCGTCATCGAACGCACGCTCATG 69318 29 100.0 32 ............................. ATCGCCCTGTGTGTAACCAGGGGTCTGCGGAT 69257 29 96.6 32 ............C................ CCGCACCATCACACCGCCCGGCCGCGGGTACT 69196 29 96.6 32 ............C................ GCCCTTCGTGCACTCCGCTGACCCCATCGTGA 69135 29 93.1 32 ............C...........C.... GAGTGCGCCGCCGACAACGCGCCGAAGACCCA 69074 29 100.0 32 ............................. GGCGAATCGTGGCTGGGCACCACCAACGCCAC 69013 29 96.6 32 ............C................ CCGAGCAGCATGTCACGCGGCCCTGTCATGCC 68952 29 96.6 32 ............C................ CAGGTGAAGGCGCCCGAGGGCTATGAGATCTA 68891 29 93.1 32 ........T...C................ CGCCGTTCTGGGGGAGCGACGATGCGGCGGCA 68830 29 89.7 32 ............C.C.............C TGGTCCGGGTAGCGGGCCTCGGTGGCGCCGCT 68769 29 79.3 0 ..A......A..C.......C....C..C | ========== ====== ====== ====== ============================= ================================ ================== 22 29 97.2 32 CTGCTCTCCGCGAGAGCGGAGGTGAACCG # Left flank : TCACTCCGCAGCATGGCGAACGCCGCCGGCACCTGCGCCTGGAACGGCGGCGTGATCTTCCCCAGATCATGCAGACCCGCCCAGAACGACAGCACCCCCCGTGCCTCACCTGCCGACAACCCCAACGCCTGCGCGATCCTCACACGCAGCTGATCACTCAGGAGGACATCCCACAGCGCCTGGAACACCCCCGCTGTATCAAGCAGATGGCAGATCACGGGGTAGGGGCGCGGCAGACCATGCTCCTTCCCCCATAACCAAACCTCGACCCGATCCTGCTCTGTGGCAACCGACTTGCGCTTCATCATGGCGCCAATCCATAACAGAACCCACTGACAACGCGTCCCCACCTGCGTAAAAGCCTTAACCGGAACACAGACGAGCCGTACGATCCAAGGCGTGGAACCTCACCAAGCACAACAGGCCGCCGTGACAGGGCCAGCCCGCTCGTCCAAGGCAACGAAATTGCAAAGCGGCTGAAGAAGCCCAGGTCGGGAAGC # Right flank : GGGCAGTTGTCCGGGGCATGGTCGAACAGCTCGGGTTCTCCGAGGCGGCTGCTCTGGAGGAGTTCATCAGCACCCAGCGTCAGACGGAAGACCAACGGCTCACCGATACGTAGCGGATTGAAGGAGGTCGTCGCACGCGAGAAGGCAGCTCCGGCTCGTGAAGCCGCTGCGTTCGCTAGTGAGCGAGAAGCCAGGTTCCGGTAGTCGCACCGGAGTCCTCGGCCGGCCACTGGACCGTAGCAGAGCAGGCCACAAGCCCTTCACTGACTTACCTCACTTGCTGGCACTGGGGCTTCCCGGACGCCGCCAATGACGAGAGCGGGGCACAGCAACCGGAACCCCGAGATCGTGTTGCTCCTCCATCGCAAGCCGGAAGGTTCCGTAGGGGTTGATGTTCGACCAGAACGGTCCGGTCAGCCCGCGCCGGTCCTCATCCGTGAGCCTCGACAGCCGGAACCCCCACACCTCACGGATCTGCTTCCGGTGCCGCTTCGAGTCCG # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCTCCGCGAGAGCGGAGGTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCTCCGCGCGAGCGGAGGTGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 79747-82946 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ948222.1 Streptomyces yokosukanensis strain DSM 40224 PRJNA299221_s017, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 79747 29 100.0 32 ............................. CTGTTGATGACGATCGTGCCAGACGTGGTCCA 79808 29 100.0 32 ............................. ATCAACGAGGCGACCGGGCTCCCCGATGCGTC 79869 29 100.0 32 ............................. TCCTAACGGGAGCCGCCCAGAGCGCGGGACCG 79930 29 100.0 32 ............................. TCGTTCCACCAGGACGCCGGCTGGACGGAGTT 79991 29 100.0 32 ............................. CGGCCGGCCTCCCGGACCGTGAGCGGCAGGTG 80052 29 100.0 32 ............................. GACTGCACGGTGCCTCCTTCAGGCGGTCGCGG 80113 29 100.0 32 ............................. CGCCTCCTCGGGGGTGGACGGCTTGGGATGGG 80174 29 100.0 32 ............................. CCGCTTATGTTCGATCCGGAGTAGCCGTGGGG 80235 29 100.0 32 ............................. AATGAGCAGATGACTGCCGAGCAGCGAGAGAA 80296 29 100.0 32 ............................. GCATCGAGGACTTCACGGAGGGTGCGGGAGAG 80357 29 100.0 32 ............................. GCCGAGGTCTTTGCAGATCTCCTCGATCTGCT 80418 29 100.0 32 ............................. TTCTTGCCGGTCGTCGTCAGCGCGGCGTTGGC 80479 29 100.0 32 ............................. CCCTCAAGGGCTCCAGCTCGAGCAACTACCGG 80540 29 100.0 32 ............................. TGGCCGGCTACCAGTCCTCCGGCGGAACCCTG 80601 29 100.0 32 ............................. TACCTGACCCCGGAGTGGGCGTACTTCGAGTG 80662 29 100.0 32 ............................. CGGTCCGGTAGCCGGCCCTCGATGTGGAGGGC 80723 29 100.0 32 ............................. GAAGGACGGGTTCTTCCACCGGTTCATAAGGA 80784 29 100.0 32 ............................. AGGAAATGGGTCGGGCCGCCTGAGTGCGGCCA 80845 29 100.0 32 ............................. CACCTCACCAGCGTCGGCAAGGCTCTGATCAG 80906 29 100.0 32 ............................. ACTGGCAGTCACGGGCGCAGGGCCCAGCTTGG 80967 29 100.0 32 ............................. GACGAGGACGACGCCGAACGGATGGCCCAGAT 81028 29 100.0 32 ............................. CGGGAATTCGTCCTGGTCCACAACCTGACCCG 81089 29 100.0 32 ............................. GGGGAGACATGGCACAGCCGTTCCGGGTCGTC 81150 29 100.0 32 ............................. AGCAGGAAGGCGGCGATGACGGCGAGGGTCTT 81211 29 100.0 32 ............................. AAACCCCGGTCGGGTTGTGGCCGACCGGGGTT 81272 29 100.0 32 ............................. ATCCAGCTCCAGGACGACGCCTCGGACAGCTC 81333 29 96.6 32 .....................A....... GTGGGCCCGGCGGGGGCGGGTTGCCCTCCGCC 81394 29 100.0 32 ............................. CTGTACTTCGTGGATGCGCTCAGCCCGGTGAC 81455 29 100.0 32 ............................. TGCGCCGGATCCGAGGACGCGATGCGGATCTG 81516 29 96.6 33 ............................C GCCTCCGTGGAGCCGGCCCGCGAACTCGCCGAC 81578 29 96.6 31 ............................C CTTCACCTCGGCCTTGACGGCGCGCTGCGTG 81638 29 100.0 32 ............................. GTGCCGAACTTGGTGCGAGACAGCTTGGGGTC 81699 29 100.0 32 ............................. GCTGGTTACGACAAGTCCGAGCGCACCTTCCG 81760 29 100.0 32 ............................. CCATGCCGGCCGTCGCCGAGTACGACTACGTC 81821 29 100.0 32 ............................. GCACGGAGCCATTCGGGACCGGGCCTTGAACC 81882 29 100.0 32 ............................. CTGCCCTCCGGCGCCTGGATCCAGCTCAAGGA 81943 29 100.0 32 ............................. CCGATCGGCGACCCGGACGGCCGGATGACGAT 82004 29 96.6 32 ............................T CAGAACAACGGACACGCGAGCTTTGCGGCCGA 82065 29 100.0 32 ............................. TTGCTGAACGTCGTCAGGTACCCGCCGCCCGC 82126 29 100.0 32 ............................. CCTCCTGGTACACGAAACCCGGCGCCGAGATG 82187 29 100.0 31 ............................. GCGTACGCGTCATGCTCCGCCTCCGGGTTGG 82247 29 100.0 32 ............................. ATCATCCAGCCGACCCACCAGATCCGGGTGGG 82308 29 100.0 32 ............................. CTCATCCCCAACGAACCTTCCGCTCCCCGGAC 82369 29 100.0 32 ............................. GGCTACTGCACCCGCTGCTACGAACGGCACGT 82430 29 100.0 32 ............................. GGGTGCAGGCACGGCCGGGAGTCCCACAGTGC 82491 29 100.0 32 ............................. CCTTCACGCTCGCCGGCCACCGCGCCGTCGGC 82552 29 100.0 32 ............................. GCAGACGAGCGGGGCCAGCATGAGTGGCTACG 82613 29 100.0 32 ............................. GCAGACGAGCGGGGCCAGCATGAGTGGCTACG 82674 29 100.0 32 ............................. AGCGTGTAGTCCGCGGCGTCGAACTTGTTGAA 82735 29 100.0 32 ............................. CAGTGCTGAGGCGGTGCTGCAGTCCTTCGGCT 82796 29 100.0 32 ............................. TTCCAGGATGTCCAGGGGACCCGCGAGCAGTA 82857 29 86.2 32 ...T.......A.C...........T... GCTTCTTCAGTACGGACTTCGAGAGCCAAGGC 82918 29 82.8 0 ..............GA...G..C..T... | ========== ====== ====== ====== ============================= ================================= ================== 53 29 99.2 32 CTGCTCTCCGCGCGAGCGGAGGTGAACCG # Left flank : GTCGCGGACATCCAGGAACTCCTCGCCCCCGAAACAGACTCCAACGTCCCTGACCCGGAGGAACAACTCGTCGATCTCTGGGATCCGGTAACCGGCCCCGTCCCTGGCGGAATCAACCACGCAATCGACATATAACAGCAAGAACACTCAAGGAGCATGAGACCACCACCATGCCCTCCATGATCACCATCTCGGCAACCGCCGTCCCCGCCCACCTCCGCGGAGCCCTCACCCGCTGGCTCCTCGAAGTCACGCCCGACCTGTATGTGGGCACAGTCTCCGCACGAGTTCGCGACGAACTCTGGGCATCGGTAGCAGCATGCACCGGCGATGGCATGTCCGTCCTGGTCTACCCCAGCGACAACGAGCAGGGCTTCGAACTCCGCACCGCTGGATCACGACGTCGCCGCCCAGTCGACTTCGACGGCTTGACGATGGTCAGCTTCGAGGCGGCCCGTAAAGAAACAGCAAACCCGATCTAACGCCCCAGGTCAGAAAGC # Right flank : GGGATGCCAGCTACCCATACATAATCGGGTGGGCGCGCACCGTGGTCCGAGAGAGCTGCGGCTTGCTGATGGCCATGCTCGCATCGAATGGGTTGGCTTGCCCGCGGCCAGCATTATGCCTGGACACCGCCCTCTACTACGGCAGGCACCCCCTCCGAGGGCGAGCAGGCTCTCTACATGAGCATGCCCTGCCCCTGAGTAGACAGCAGGCGGCACACGGACGGGACGGTCCCGTCTCCCGGCGCGACTGTGACGGTCAGCAGCCAGGCCGGGCCTCCCGGAAGGGCTGCGGCCCGCTCGTACACTCCACCCGATGCGTCAAGCAGCCGACGGCTCGCCGCCCGGCGGGTGGCGTACCACCTCTGGAGGCGCTCGGACAACCACACCGCGAGCGGGACGGCCCGCTCGCCGCCGGTGCGGCGGGAGCCGCGGCCCACCACGCGCAGAGCCGCTCCCGGCGCCGCCGGAGGGGTCTGTTCCACCGGCACACCGAACGCCTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCTCCGCGCGAGCGGAGGTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCTCCGCGCGAGCGGAGGTGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //