Array 1 52-2618 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACCDB010000017.1 Tepidicella baoligensis strain B18-50 Scaffold17, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 52 37 94.6 35 ........................G.....G...... CGCTGGCGTATGGCGGCAACGGTCGCACCAACTAC 124 37 94.6 35 ........................G.....G...... CGCTGGCGTATGGCGGCAACGGTCGCACCAACTAC 196 37 94.6 35 ........................G.....G...... CGCTGGCGTATGGCGGCAACGGTCGCACCAACTAC 268 37 94.6 35 ........................G.....G...... CGCTGGCGTATGGCGGCAACGGTCGCACCAACTAC 340 37 94.6 35 ........................G.....G...... CGCTGGCGTATGGCGGCAACGGTCGCACCAACTAC 412 37 97.3 35 ........................G............ TTGAGTTCTTTGGTGAACTGTTCGCCAAAAGTTCG 484 37 100.0 35 ..................................... TTTGGTCATGGCTGCTCTCCCAGCCGCTCGCGCAG 556 37 100.0 36 ..................................... GTTCCGGGCTAGTTCTTTCACCCAATCGACGCGGGG 629 37 94.6 36 ............T.....................C.. GTTCCGGGCTAGTTCTTTCCCCCAATCGACGCGGGG 702 37 94.6 38 .....C..........C.................... ACGTACTTGTGGCCCTCCCAGTGGCTCACCCCGGCGAA 777 37 97.3 35 ......................C.............. AGGTTGTTGGTCGGTCATTTCATTCCCCCCATCCG 849 37 94.6 38 .....C.........................G..... ACGTACTTGTGGCCATCTCAGTAGCTCACCCCGGCGAA 924 37 97.3 35 .....C............................... AGGTTGTTTGTCGGTCATTTCATTCCCCCCATCCG 996 37 97.3 35 ......................C.............. AGGTTGTTTGTCGGGCATTTCATTCCCCCCATCCG 1068 37 94.6 38 ...G...........................G..... ACGTACTTGTGGCCATCTCAGTAGCTCACCCCGGCGAA 1143 37 94.6 38 .....C.........................G..... ACGTACTTGTGGCCATCTCAGTAGCTCACCCCGGCGAA 1218 37 94.6 38 .....C.........................G..... ACGTACTTGTGGCCATCTCAGTAGCTCACCCCGGCGAA 1293 37 97.3 38 .....C............................... ACGTACTTGTGGCCATCCCAGTAGCTCACCCCGGCGAA 1368 37 100.0 34 ..................................... CACCTGGTCGCGGAACTCGCTCACGCGGCCCGAT 1439 37 100.0 35 ..................................... TTGTGTCCCCAGCTCTAGGTGCTCAGGGTTAACGC 1511 37 100.0 34 ..................................... AGCTGCACGGCGATGCGCTGCATGGTGCTGGCGG 1582 37 100.0 36 ..................................... ATCGGTGTAGCGCAGGCTGATGAGCCGCTTCCTGAC 1655 37 100.0 35 ..................................... CGTCAAACCCTTTCGAGAGGAAAACCGCAATGGCC 1727 37 100.0 35 ..................................... CCGCTTGGTGATGCTCACGCGCCAGCTGGTGACCT 1799 37 97.3 34 ........................G............ TGCAAGGCCAAGTGCGACTGCCACGCACGCAGTG 1870 37 97.3 34 ........................G............ TGCAAGGCCAAGTGCGACTGCCACGCACGCAGTG 1941 37 97.3 34 ........................G............ TGCAAGGCCAAGTGCGACTGCCACGCACGCAGTG 2012 37 97.3 34 ........................G............ TGCAAGGCCAAGTGCGACTGCCACGCACGCAGTG 2083 37 100.0 34 ..................................... TGCAAGGCCAAGTTCGACTGCCACGCACGCAGTG 2154 37 100.0 34 ..................................... TTCCTTTCAAGGGGATGGGGCCGAAGCCCCTGGG 2225 37 100.0 35 ..................................... GCGTTGATGGCGTTGCCGTAGGCGCGCAGGCGCAC 2297 37 100.0 34 ..................................... ACGATGCCGAAGCTCGATGTCAGGGCCGATCGCA 2368 37 100.0 34 ..................................... GATCGTTTCCGGACGACCTTGCTGCCGCCGCCGA 2439 37 100.0 35 ..................................... GTCGGCCAGTTGCTTGCTGTCCTGGCCGGGCTGCT 2511 37 97.3 34 ........................A............ AGGCCAAGGGCTGGACCAGTGCAGAGGCCTACCA 2582 37 73.0 0 ................C.........ATCC.C.GCGG | ========== ====== ====== ====== ===================================== ====================================== ================== 36 37 96.9 35 GGATCACCCGCCCGCGAGGGCGGGTGTGGATTGAAAC # Left flank : GCGGGTGTGGATTGAAACTCCAAGGGCGGCTGGTTCCGCTCTGACAAGAGCG # Right flank : GCGGCAGCAAGGTCGTCCGGAAACGATCGTTTCAATCCACACCCGCCCGCGCGGGCGGGTGATCCTCGGCGGCGGCAGCAAGGTCGTCCGGAAACGATCGTTTCAATCCACACCCGCCCGCGCGGGCGGGTGATCCTCGGCGGCGGCAGCAAGGTCGTCCGGAAACGATCGTTTCAATCCACACCCGCCCGCGCGGGCGGGTGATCCTCGGCGGCGGCAGCAAGGTCGTCCGGAAACGATCGTTTCAATCCACACCCGCCCGCGCGGGCGGGTGTGGATTGAAACCGTCAAAAAGTCCGCCAAGATGGTCCCGACGATTGGATCACCCGCCCGCGAGGGCGGGTGTGGATTGAAACAGGCCAAGGGCTGGACCATTGCAGAGGCCTACCAGGATCACCCGCCCGCGAGGGCGGGTGTGGATTGAAACTGACGCTGCGCAACTGGTGCGCGCGCCATTCCATGGATCACCCGCCCGCGAGGGCGGGTGTGGATTGAAACAC # Questionable array : NO Score: 5.65 # Score Detail : 1:0, 2:0, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.54, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGATCACCCGCCCGCGAGGGCGGGTGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-18.20,-17.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [8-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : NA // Array 2 6378-7325 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACCDB010000017.1 Tepidicella baoligensis strain B18-50 Scaffold17, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================================================================== ================== 6378 37 86.5 34 TCCA............C.................... AGATGCCGCTCGGGATGCTGCCCGCAGAGGCCAA 6449 37 100.0 35 ..................................... AAGGCCTCCACGCTGCCAAACAGCCTGCCCATCTG 6521 37 100.0 35 ..................................... CTGAAAGGCGCCTGGCTGACCACGACGCTGATGGG 6593 37 100.0 35 ..................................... CCCATGCACCTGCGTGAACACGCGCTGGACGCCAT 6665 37 100.0 84 ..................................... CCAAAAATCGACGGCCCCGTTGACACTGAGGGCGGGGATCACCCGCCCGCGNGCCTCCACGCTGCCAAACAGCCTGCCCATCTG 6786 37 100.0 35 ..................................... CTGAAAGGCGCCTGGCTGACCACGACGCTGATGGG 6858 37 94.6 35 ...G....................G............ CTGAAAGGCGCCTGGCGGACCACGACGCTGATGGG 6930 37 97.3 36 ...G................................. AACTGCGCCGTGGTAGCCATGTTCACGCCCCATGCG 7003 37 100.0 34 ..................................... CACCAGCACCAGGCGCACGCCGTCGGTGGCCGGG 7074 37 97.3 34 ......................C.............. CACCAGCACCCGGCGCACGCCGTCGGTGGCCGAG 7145 37 97.3 34 ......................C.............. CACCAGCACCCGGCGCACGCCGTCGGTGGCCGAG 7216 37 97.3 36 ........................G............ AAGCTCGCCGACGACCTCGACATCGACCGTGCTCGA 7289 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================================================================== ================== 13 37 97.7 39 GGATCACCCGCCCGCGAGGGCGGGTGTGGATTGAAAC # Left flank : CCCGCCCGCGAGGGCGGGTGTGGATTGAAACACCGCCCTTGCCGAGCTGCTGCGCCTGCGCGATGGCCGGATCACCCGCCCGCGAGGGCGGGTGTGGATTGAAACCAGAACTCTTTGGCGGTGAACTCCACCAGCTCGCGGATCGCCCGCCCGCGAGGGCGGGTGGGGATTGAAACCAGAACTCTGTGGCGGTGAACTCCACCAGCCCGCGGATCACCCGCCCGCGCGGGCGGGTGATCCGCGCGCTGGTGGAGTTCACCGCCACAGAGTTCTGGTTTCAATCCCCACCCGCCCTCGCGGGCGGGGGATCCGGCCATCGCGCAGGCGCAGCAGCTCGGCAAGGGCGGGGTTTCAATCCACACCCGCCCGCGCGGGCGGGTGATCCGCGCGCTGGTGGAGTTCACCGCCACAGAGTTCTGGTTTCAATCCCCACCCGCCCTCGCGGGCGGGGGATCCGGCCATCGCGCAGGCGCAGCAGCTCGGCAAGGGCGGGGTTTCAA # Right flank : CTCGAATTCGAGTGCGTGCTCGATGACGTCGGCGCTGGATCACCCGCCCGCGAGGNTCAGACATTCACCCACGCTGATCCGTCCCATGGATCACCCGCCCGCGAGGGCGCGTGTGGATTGAAACATGTCCGACATTCACCCACGCTGATCCGGCCCATGGATCACCCGCCCGCGCGGGCGGGTGATCCCCGGCGGGGATGACGTTGCCCAGCGCAGCCGTTCGGTTTCAATCCACACCCGCCCGCGCGGGCGGGTGATCCCCGGCGGGGATGACGTTGCCCAGCGCAGCCGTTCGGTTTCAATCCACACCCGCCCGCGCGGGCGGGTGATCCCCGGCGGGGATGACGTTGCCCAGCGCAGCCGTTCGGTTTCAATCCACACCCGCCCGCGCGGGCGGGTGATCCCCGGCGGGGATGACGTTGCCCAGCGCAGCCGTTCGGTTTCAATCCACACCCGCCCGCGCGGGCGGGTGTGGATTGAAACCTAACGGCTGCGCTGGG # Questionable array : NO Score: 5.78 # Score Detail : 1:0, 2:0, 3:3, 4:0.89, 5:0, 6:0.25, 7:-0.32, 8:1, 9:0.96, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGATCACCCGCCCGCGAGGGCGGGTGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-18.20,-17.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0.68 Confidence: HIGH] # Array family : NA //