Array 1 185148-185482 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMVI01000014.1 Streptomyces albulus strain JCM 4718 sequence014, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 185148 30 96.7 31 .............................T TCACCCTTTGCTCCTCGTAATTTTCTACTGG 185209 30 100.0 31 .............................. TGCAGATTTCACCTAGGATCGGCGGATATTG 185270 30 100.0 31 .............................. ACGTCCAGAGCCGCGATGCCACCGGGGTTGC 185331 30 96.7 31 .............................T CGCTGCGCCGTCCATAGGTGTAGTCGAGCGT 185392 30 96.7 31 .............................G CAGCCTTGAGCCTCGACGTCGTGATTCACAC 185453 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== =============================== ================== 6 30 98.3 31 CTCTTCTCCGCGCCAGCGGAGGTGAACCGC # Left flank : GCCACGCATCGTCGCCGACATCCAGGAACTGCTCGACCCCGACACCAAACGCGACGTCCCCGACCCGGAAGAACAACTCGTCGACCTCTGGGACCCCATCGCCGGAGTCATCCCCGGCGGCACGAATCACGCAACGGACGCATGACCACGCCGACAACGGAACACAGCCCATGGCCTCAATGATCGTGCTCTCCACCACAGCCGTCCCCGACCACCTCCGCGGAGCCCTCACCCGCTGGCTCCTGGAAGTCACCCCGGAGCTCTACGTCGGCACCGTCTCCGCCCGCGTACGCGACGAGCTTTGGACCGCCGTGGCCGCATGCACAGGCGACGGCATGTCAGTCCTCGCCTACCCCAGCAACAACGAACAAGGCTTTGAACTCCGCACCGCGGGAACACGACGCCGGCACCCGGTGGACTTCGACGGCCTGACCTTGATCGCCTTCCAACGACTGAGCAAAGAAAACGCAAACCCCTCATAGAAGCGCAGGTCAGAAAGC # Right flank : CCTCGGTGAGGGTAGTGAGCGCGATGCGCTGTGTCTTCTACGCGCATGTGCAGCTACGACGTGGCCAACCCCAATTCCGCGGTGACCGGCGTGATCCGTGGGGTATTGGTCCAACTCCCCCCTCGGACACTCTGGGGCACCGACGAAAGGTGCCCGATCGCACCGACGGAACGGGCGGCATCGTTACGATGCCGCCCGTTTTGATGTTTCTGGGCATGGGAACGCGGACCGCTGACGGCGTGAGGCCGTTGGCGGTCCGCGTTGGCTTAGTGATCTTCGGTTGTTCAGCTCTCGGAGGGCTCGATGGCTAGCCTGGTGCTGTGCGGAAGGCCTCAGGGTTGGTTGATGTAGCCCTTGGGGGTCCAGGTGCCCAGGGGCTTGGTCTTGCGGCGGCGGGTGGGTCGGCGGCGGGGGCGTTTGTCGCCCAGGGCGATGGCGTTGGCCCAGGCGGTGAGTTTGCGGCGGTTGGCGTGGGCGAGTTGGAAGGCGAGTAGGAGGGT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCTCCGCGCCAGCGGAGGTGAACCGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGAACCGG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [48.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 33909-34301 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMVI01000027.1 Streptomyces albulus strain JCM 4718 sequence027, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 33909 28 100.0 33 ............................ CCCCGGAGTTGGGCAGTGTCTACCATGCCGTGG 33970 28 100.0 33 ............................ TGGTTCCTCTCTCGTGGGGTATTGGGCAGCCGG 34031 28 100.0 33 ............................ ACCTCTGGTACCGCAAGACCATGCGGGAGTGTG 34092 28 100.0 33 ............................ TCCACGAGGTCCCTCCAAGGTCCGTGGATCAGG 34153 28 96.4 33 .......................C.... GAGCTGGAGATCCCGCAGGACACCCGCACCGAG 34214 28 89.3 33 .............A.T.A.......... ACCCGTACCGAGCGCAGGAGATGACGCCTTCCA 34275 27 78.6 0 ............G....-...C.G..TT | ========== ====== ====== ====== ============================ ================================= ================== 7 28 94.9 33 TTCTCCCCGCCGACGCGGGGGTGTTCCG # Left flank : CGCTCGCTCAGTTCGACACAGATGGTGACGCCGACATGATGTGGGGCGACTGCGGCACCCTCTACTGGCTCATACGTCCAGAAGATCTAGCCGAACGCCGCTTTGACCGCGCGATGTTCACCTGGCAGTGCAGTTGACGGGAATCCGCCCGCCCACAGCCCTCGTAGCACCCGCTCCCTCCATGACCAGGTGCACGGGCTGCAGGTCGCACTGACGGCCTGGGGCTGCGTCTCTCCCCCCTCCGACGCCCCGCAAAAACCACACATAAGGAAACCAACAACACCGCGAACGTGGACGTGGCGTTGTTCTTTGGGTCGCCCGGGAAAATCTCGCCCCCAGCTCCCGTTCGCCGGGGCGACCACCTGGGACGGAACACCGGAACACCCCCGCGTCGGCGGGGAGCACGCCTTCGCGATCAGGTCGCGTGAGTAGAGCCGCGGAACACCCCCGCGTCGGCGGGGAGCACCCCCTTGGGGGGGTGCCTGCTTGCCCGGGGGGCG # Right flank : TTCCACACGGCCACTCTCGCTTGATCGCCTAGGCTCGAAGGAGGGCGTGGGGCTGGAGCCTCATGTCCACCGCTTCTCGCATACCGGCCTCGCTCGCGGACCTGGCCGTCCCGGTCGATGAGCTGGCCCCCTACCACCGCAACCCGCGCACCGGCGACCTTGACTCCATCACCGAGTCGCTGTCCGCTCATGGCCAGTACCGGCCGATCGTCGCCAACCGCGGCACGCTCACCGGACGCCCCAACGAGATCCTGGCCGGCAACCACACCCTCAAGGCCGCCAAGCAGCTCGGCTGGGGCGAGATCGCCGTGACGTGGCTGGACGTCGATGACGACATCGCGGCGAAGATTGCCATCGTCGACAACCGCACCAGCGATCTCGCCGGATACGACACCCTCCTCCTCGCGGACATCCTCCAGGACCTGCCGGATCTGCAGGGCACCGGCTACGACCAGGAACAGCTCGATCAACTCCTGGACGAGACCGATCTGCCGGCTCCG # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCTCCCCGCCGACGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched TCCTCCCCGCCGACGCGGGGGTGTTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.60,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [20.0-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,1.01 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], // Array 2 50480-49965 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMVI01000027.1 Streptomyces albulus strain JCM 4718 sequence027, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 50479 29 75.9 32 .AA.A....CG..TT.............. CGCATCCTGCGCCGCGCCAGCTCCCTGGCCGC G [50464] 50417 29 100.0 32 ............................. GTCGCCGGGTGGGCGCAGGCGGGGGCCGACCG 50356 29 100.0 32 ............................. CCACCACGAAGGGACAGATGGACGACCCGGAG 50295 29 100.0 32 ............................. ACTCCCTCCGCGGCATTCACCTGCACCAGTTC 50234 29 100.0 32 ............................. AGCGCCACGTCGTCGGTACGCGTCAGCCAGGC 50173 29 100.0 32 ............................. ATCGGTATCAGGCCACCGGGGCGCGGGTGGGG 50112 28 96.6 32 .................-........... ACCACGACGCTCCGCATGGCGGCCAGCCAGAT 50052 29 93.1 32 ......T..........A........... TCCGCGAAGCGAGCCAAGGACGCTGAGGCCCT 49991 27 89.7 0 .....................-...-..A | ========== ====== ====== ====== ============================= ================================ ================== 9 29 95.0 32 GTGCTCCCCGCCGACGCGGGGGTGATCCG # Left flank : CCGCGTCCGCGTAGATGTGCCCGCGTCGGCGGGGACAGCGCGCTGCTCCGCTCCACCAGCGAGAGCCGGACCGGAACACCCCCGCACCGGCGGGGAGAACCTGCGCGATCCGGTCCAAATCACGGGCGAGATCGGAGCACCCCCGCACCGGCGGGGAGAACCAGTACAAGGCCGCGCACCCCCACTACCCCGGCGGTACACCCCCGCACCGGCGGGGAGAACGACGGTGCCCCGCCGTCCCCGAACTCCGCGAACGGAACACCCCCGCAGCGGCGGGGAGAACGAGGTCACCGAGGCGATCCCGTCCCACACGGTCGGTACACCCCCGCACCGGCGGGGAGAACACATGGAAAAGCATCACGTGGCGTTCAAGGGGCGGAACACCCCCGCGTTGGCGGGGAGAACCCGATGTCCTTGAGGACCGCGCACTTCTCATCCGGAACACCCCCGCGTTGGCGGGGAGAACGGGCCTCCGAGGTTCGAGCAATTCGGCATGAACG # Right flank : AACAGCCTGCTTCAGGGGCAACGACTTCGTGGGCTGTTGCGAGACGTACGCGCACGAAGATGGAGCCACAGCGGTGTTCAGCTCCACGCGGGCGGTAGAGCGAACCGTCCACCGGGCTCGTCCGTGTACGAATGAAGTCTCTTGCAGCCTTCGTTCTACCTGCGTTTCCGGGCCCGCAGGGCGATCACGGCTACCGCGTCTGGAGCTAGGGCTGGTGGATCGTCGGGCGCAACGGTGGAGTCGAGGACCTTCAGATGTCGTTCGAGGGCTGCGAGGTTAACGGAGTTGTCGATGGAGGCGACTCCGTTAACGGTGATCTTCAATGGGTCGGCGATGAGCCGGGCCATGCGCTCTTGCAGGACTTCTGCCACTACCGCGCGGGCAGTTCCGAGTCGCTGGTACCGGTTGGTGAGGTCGTCGGTGGTGAGGTCGTCACCGAGTTGGGTTTGTAGCCAGCGCAGGACATCGCTGTTCACGTCGTGCTCCAGGTCGAGGCGGCG # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCCGACGCGGGGGTGATCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCGCCGACGCGGGGGTGATCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.20,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.91 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //