Array 1 145122-143637 **** Predicted by CRISPRDetect 2.4 *** >NZ_WMYC01000004.1 Streptococcus salivarius strain BIOML-A17 scaffold4_size200784, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 145121 36 100.0 30 .................................... TCATGTTTTCTGAGGGCGACGCGAACACCG 145055 36 100.0 30 .................................... AGTGAAGCTGGGTGGAAAGAGAACCCTCGG 144989 36 100.0 30 .................................... GGGATGTCATTCTCTACTACCAGAACAGCT 144923 36 100.0 30 .................................... ATAAAATTGACAGTGAGGGTAACTCAACAA 144857 36 100.0 30 .................................... TTCAAGATTCTCGTGGGATTTGGTCCGATT 144791 36 100.0 30 .................................... AGCACCAAGCACACAGCTATCTTCTGATAT 144725 36 100.0 30 .................................... AGTCGAGAAGCTCAAGAGCGTCTTTAGTTT 144659 36 100.0 30 .................................... CTGACATGCGTGAATTCTTTAAAGAGTATC 144593 36 100.0 30 .................................... TTCAACAAGCATTGCCAGCGATTGGGTATG 144527 36 100.0 30 .................................... ATAGCGTCAACATCGCCATCAAACACTTTA 144461 36 100.0 30 .................................... CAGACAGTGCTGACCCTAAACTTCCTACTC 144395 36 100.0 30 .................................... CAAAGCGTATCAATGTCGTCATTTAGTTGT 144329 36 100.0 30 .................................... AAGCATCTACTCCTTTTAGTCGTCAACACG 144263 36 100.0 30 .................................... TCTTTCAAGATAATAGAGTTTTTAGAAACA 144197 36 100.0 28 .................................... CGAGCGCCTGCGAATGTCACTTGTTTCA 144133 36 100.0 29 .................................... GTATTTGAATACTGTAAATTATCACAGTT 144068 36 100.0 30 .................................... TGCAAGCGGTGGCAAACATCTATTCTACTT 144002 36 100.0 30 .................................... GACACAGCAGTGTTCTTCTTTTACTTTATC 143936 36 100.0 30 .................................... GTGAAGTGTTTGATAACCCTATGTTTGAAG 143870 36 100.0 30 .................................... ACGACCGTACTTTCGAGCGTGCGTGGGTTC 143804 36 100.0 30 .................................... AAATACCGATAAGACAATCGTTTTGCTCAC 143738 36 100.0 30 .................................... GTTTTGGTATGGTTAATGCTTTTCTTTTAG 143672 36 88.9 0 .............................A.C..GG | ========== ====== ====== ====== ==================================== ============================== ================== 23 36 99.5 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : TTGATAGTTTTATTTCAGAGAAATCTTATGATAGTTTTTATAAGCAAATTGGTCAGCTAGTCAAAAAGTATCCAAACCTAACCTTTATTTTGTTTCCGAGTGACCAAGGCTATTTAAAGATTGATGAGGAAAGTAGTAGGTTCGTCAATATTTTATCTGATCAGGTGGAGCATTTGTATGATATTGAGTTTATGTATGAAAGTGTAGCGAAATATTATCCAAGTAATAATTTTCCAACGAGAGAGGATTTTAGGATATCCTTAGAGACCGTAACACCTTATTTATTGACAAAAATGCTGAGACAACCTAGTCTCACACTTGTTGATTCTGTAATTTTGAATATTCTAAATCAGCTGTTTCAATTTAATTACCGTATAAGATATTCACAAACTCCTGATGAGGAGTTATTGCATAGATATTTAGAAAGTAAGAATTGACAAGGACAGTTATTGATTCTATAATCACTATGTGGGTATAAAAACGTCAAAATTTCATTTGAG # Right flank : TTGATTGATTCAACTTAAAAAAGCCAGTTCAACTGAACTTGGCTTTTTAAAATACGCGATAAACATAAGGGTTGTCAGGTTGACCAACCTCTTTGACCTCAGTCAAATTGAGGATAGGCAGGCTCTGTTTGAGATTTTGATAGTAATCCACAGTGATGGTACCAGTGACTTTTACCCAGGTATTATCCTTGAAGGTTTGGTCACTTCCTGTCGTCGCCAGTCCGTAAACACCTGAATCGGCGATACAGTGGATAATCCCAAAACGGAAGATGAACTGATAACCCTTGGTTTGTGGGTCATTGTAAACAAAACCGGTATAGGTGACCTTCTTGCCTACGAAATCGTTAGGATAGAGGTAAATGAGCTCCATGACTTCCATGTAATTTTCTGTGGTAATCTGGATGGTCTCACGTCCCCTGTACTTGGTGAGCTCTCTGGTCATTTCCTTCTCATAAGCTGAGGAGGTGAAGTAGGAGCTGGTGTCTGGCTTTAAGTACTGG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //