Array 1 18805-13871 **** Predicted by CRISPRDetect 2.4 *** >NZ_PJBS01000089.1 Psychroflexus sp. MES1-P1E contig51, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== =============================== ================== 18804 46 100.0 30 .............................................. CGTCGTGAAGGTCTGAGAGTCTAGCAGATG 18728 46 100.0 30 .............................................. ATCTTGATTTGTTTTTTTAAAGCCCGTGGA 18652 46 100.0 29 .............................................. CCTTCAATCTCTACGATCGTTCCATCCTT 18577 46 100.0 30 .............................................. TTTGTTTCACTCATTTTTATCCTCTGTTAG 18501 46 97.8 30 ...............................A.............. TAAAAAATGCTCCCACCGTATTCATCATGT 18425 46 100.0 30 .............................................. CGGCAGTAAGCATAACGCTTAGCTTGTGGG 18349 46 100.0 29 .............................................. CAAATAGAACTAATATTAAGACCTTTATC 18274 46 100.0 30 .............................................. TATTAATGTAATAGAAATACAGGCATATCC 18198 46 100.0 30 .............................................. TCTAGTATTTCTTTGCGTGCCATTCTCTTT 18122 46 100.0 30 .............................................. TTTGCTATTAGTTTAGTGTCCGCGATAGTA 18046 46 100.0 30 .............................................. CAGAAAGCTCGCGAACATCGCCAAACTGAT 17970 46 100.0 30 .............................................. AGATTCGAACCATTTAAAGATATTAACTTT 17894 46 100.0 30 .............................................. AGTCCAATCCATTTTATACGGACGTAAACC 17818 46 100.0 30 .............................................. AGATTTTGCGGTAGACATTACGGCTGCAAC 17742 46 100.0 30 .............................................. TCAGGGTCTGTGTCTGATCCTGTGAAAGTA 17666 46 100.0 29 .............................................. CAACTAGTCCAGTTGAGTCTCAGATTGTA 17591 46 100.0 30 .............................................. TTATTGAAAGGGCATCCTCAAGCGCCCCAG 17515 46 97.8 30 T............................................. AAACAAGGCTTAACATTCCGCAATTAATCA 17439 46 100.0 30 .............................................. ACAAAGAAGGTGATCAAAGAAAATGGCATT 17363 46 100.0 30 .............................................. CAGAAACATTATATTAAAACCTGAAACGGA 17287 46 89.1 29 ..................GGGA.........A.............. AATAAAACAAGAAGCATTTACAGCACAAG CTACATAGAGAGCCCT [17254] 17196 46 89.1 30 .A................GGGA........................ CAGAGCGAAAATGGGTCCAGACTTGTTCTT CTACATAGAGAGCCCT [17163] 17104 46 100.0 30 .............................................. AAATAAAAAGGAGGGTGGTATTGAAATCTT 17028 46 97.8 30 .............................................C TTGATAGTGTTGCATAGCTGAGACAACCGA 16952 46 100.0 30 .............................................. AGTGATTCACAGGTTTTTGGGTCGAATTTA 16876 46 100.0 30 .............................................. TTCTGAAATGTGTTTTGTTTTTCGCTTCCA 16800 46 100.0 30 .............................................. CCTTGAAATGGTTTACATTTGTCATGATCT 16724 46 100.0 30 .............................................. AGTCCAATCCATTTTATACGGACGTAAACC 16648 46 100.0 30 .............................................. CTTAGTAAACTTCTTACTTCCATGTTAAAA 16572 46 100.0 30 .............................................. AGTCCAATCCATTTTATACGGACGTAATCC 16496 46 100.0 30 .............................................. TTTCTTCGCTTTTTTGGTTTTGATTTTTTA 16420 46 100.0 30 .............................................. CAGCACAACAAGCGGGGCGGGCAGTGTTTA 16344 46 100.0 30 .............................................. TGAAGTGCTAATCTAACGCCTTCAACTTTT 16268 46 100.0 29 .............................................. ATTTTATGTAAGTAAGCGTATGCAGTTAA 16193 46 100.0 30 .............................................. GCAAACCAATTTATAGGACTCTACGAAATA 16117 46 100.0 29 .............................................. TACAGGACGGAGTTAAAAACGTTGAGAAG 16042 46 100.0 30 .............................................. AAGGAGTGATTGACTAAGAGAATGAAAAAG 15966 46 100.0 30 .............................................. AATTTGTGAATTAATGAGTGATTCATACCT 15890 46 100.0 30 .............................................. AGTAAAAAAGCAGCTTAACGAATGGGTTAA 15814 46 100.0 30 .............................................. CTCCCTTGATAATTACGAAGCATTTTCAAA 15738 46 100.0 30 .............................................. GGAAATGTTTTCACAACCTGTACTATTCGA 15662 46 100.0 30 .............................................. TGTAAGTAAGCGTATTCATTTGACGAATTA 15586 46 100.0 29 .............................................. AGAAATATAGAAGAGAGCCAGTAACTTAA 15511 46 100.0 30 .............................................. TGAGTTAATAGATGTAGAAGAAAGAATCTT 15435 46 100.0 30 .............................................. TTAATTGTAGTTCTGTTCTTGATACGCCAT 15359 46 100.0 30 .............................................. CAGCACAACAAGCGGGGCGGGCAGTATTCA 15283 46 100.0 30 .............................................. AAAAAGCTTTTTAAAACATTAGTAAGTATA 15207 46 100.0 30 .............................................. CTTGAGATGTATCCTCCCAAAGATCTCAGA 15131 46 100.0 30 .............................................. CTAAGCACATTAACGCTAAAGGTCGTGCTA 15055 46 100.0 30 .............................................. ATCTATTGCGTGATTCCATGAGTCTTTGTA 14979 46 100.0 30 .............................................. CTTCATTTTATCTAGCGACCAGCTTATCGA 14903 46 100.0 30 .............................................. TTAGTTGTTCTTTTTCTGTTGTCATGGTTT 14827 46 100.0 29 .............................................. ATAAGAACTTAAAAAGCCAATGCGGTTAT 14752 46 100.0 30 .............................................. TTCAATTGTAATGTTATCCCGTGGCGTTAT 14676 46 100.0 30 .............................................. AACCGTTTACTTAATTGACCAAAGCGATGC 14600 46 100.0 30 .............................................. ATGGTCATGATTCAGCTACAGAACGAGAGT 14524 46 100.0 30 .............................................. GTTGCGGGTTTTGTACTTGTAGTTCTTCCA 14448 46 100.0 30 .............................................. ATTTTTAAGATAGTCTAGTAGTTCTTTAAT 14372 46 100.0 30 .............................................. GTCATCGTCAAAGTTTATCGGGTCGTCTCT 14296 46 100.0 31 .............................................. TGTATATATTGCATTGCTGTTGATGTTCCAG 14219 46 100.0 30 .............................................. CTTCTTTGCTTAGTTTCTTCATAACTATTT 14143 46 100.0 29 .............................................. ATGATAAAAGAGTCACTAACCCGAAATAG 14068 46 100.0 30 .............................................. TGTACGTGCTTGTTTAACTACTCCCTTGCT 13992 46 100.0 30 .............................................. AAAAGGTTGCCCTCTTACTTAATTGTAAGG 13916 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== =============================== ================== 65 46 99.6 30 GTTGTGAATTGCTTTCAAAATTGTATTTTTATTGAGGATTCACAGG # Left flank : AGGATTTACAGGACAGCTTTAATCAATTCCCTAGCCTTTAAAGTTATGAATTGCTTTCAATCCCGAGAGATACATCGGGAGTATTTTTATTGAGGATTCACAGGAACGTTGATAATCAAGATTTAAGCATTAATGTTGTGAATTGCTTTCAATCCCGAGAGATACATTGGGAGTATTTTTATTGAGGATTCACAGGCATTACCATTAGCACCACAACAAACACTAGTTGTGAATTGCTTTCAATCCCGAGAGATACATCGGGAGTATTTTTATTGAGGAATCACAGGCAAACGGGAAAATTTGAAATACTAAATCAGTTGTGAATTGCTTTCAATCCCGAGAGATACATCGGGAGTATTTTTATTGAGGAATCACAGGATATTGAATTTGGTTCAACTGGTATTTTATGTTGTGAATTGCTTTCAATCCCGAGAGATACATCGGGAGTATTTTTATTGAGGAATCACAGGCAGGTTATAGAGGTGAAAGGGGTACTTTAA # Right flank : AAACCTTAAAGACTAATGAAATACGCTCACGTTGTGAATTGCTTTCAATCCCGAGAGATACATCGGGAGTATTTTTATTGAGGATTCACAGGAAAAACTTGAATCTTATGGTTATGTAGTTAGTTGTGAATTGCTTTCAATCCCGAGAGATACATCGGGAGTATTTTTATTGAGGATTCACAGGGCAACTTATGTGCTTGTAAAAGCATTGTATGTTGTGAATTGCTTTCAATCCCGAGAGATACATCGGGAGTATTTTTATTGAGGATTCACAGGAATGAAGGAACGGACTATTTTATTCAAGGGGTTGTGAATTGCTTTCAATCCCGAGAGATACATCGGGAGTATTTTTATTGAGGATTCACAGGTGGTGTGCCTTTATGAGTTTCAGTCTATTGGTTGTGAATTGCTTTCAATCCCGAGAGATACATCGGGAGTATTTTTATTGAGGATTCACAGGGAGTTCCTTGAGAGACTGCCCAATAGATCCGTTGTGAATT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTTATTGAGGATTCACAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.57%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAATTGTATTTTTAGTGATAATTCACAGG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.30,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-45] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //