Array 1 68155-68367 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOAC01000012.1 Streptomyces californicus strain NRRL 2423 contig12.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 68155 30 100.0 31 .............................. GTTTTGTGGATACGGACACCCGACGCGCCCT 68216 30 100.0 31 .............................. CGCCGTTCTCCTCCTTGAGGGTTCCGGCGAT 68277 30 86.7 31 ...........TGG...............A GCAGGGGCAGGAAGTCCAGGACTGCGGCGCC 68338 30 70.0 0 ..............GC.T....CT..GAAT | ========== ====== ====== ====== ============================== =============================== ================== 4 30 89.2 31 GTGGTCCCCGCGTACGCGGGGGTGGTCCCG # Left flank : CCGACAAGATCCCGCCCTGCCTCCCCGAGGCGGTGGAAGTCCGTTCGCCGGGCGCCACGGAACCGATCTACGAAACCCTCGTCGAATGCACCAACTGCCGCCGCCCAGGCCCATCGGAAGCCCTTCCTGACGGCCTCTGCCGCCCCTGTCACCGCGCCCACACCACGGGCGGCAACGACACCGCCGCACCCACCCCGGACGAGGTCGCCGCCGTCAAAGCCCACATCGCCAACCTCCGCAACCTCCTCAAGCCCGTCTGACTCCCCGACCACCACACCCTCGTCGGGCAGGCCGGGCTTACCGCAGCCCCGGGGCCCACGCCTGCGAAAGGCCTGACCACAGCTCTTCCACCGAAGCCGGGCCGATGAGACCGGCGGCGGGCAGAATGGCATCAGCCGAAGCACACGTGACCACTCTGCGGCAGGAGGCGAGATATGTCGGCTTCTCAAGAAGTAAGTAAAAACCGCCTTCCGAGCACCTAAACCCCCAGGTCACGAAGG # Right flank : TGCCGCTCCTCAGGTTCTTGCCGTGCTCACCGACATCCTTGCCGCCGTCGAGGACGGTGAGCGGGGGGCCTTGTGGAATCTCTCCGAAGGCGGGCGGGAGTTGGACGCCAATCTGGTGTGGCTGCCCGCCGGGGCCGAGGTCGGGGAGCATCAGGAGGACGTGCTCGACGTGTTCCTCGTCGTTCTGGAGGGCGGGGGCACGGTGAAGGCGGCGGGCGGCCGTGAGCTGGGGCTGGAGGCCGGGGCCGTGCTCTGGTTGCCGCGTACGTCCCGGCGCGCGCTGGCCGCCGGGCCGGACGGGCTCGGGTATCTCACCGTCCACCGCCGCCGCCCCGGCCTCGCGATCTCCGCGCCGAGTGCGGCGTACGAGGGTGGCGAGGGGCCCTGCATGCTGGACCGGGTCTGCCCCGAGTGCGGGCGGCTGTCGCAGGACCCCGCCCCGGTCTTCTGCAGTCGGTGCGGGGAGCGATTCCCCGAGAGGTGAGCCCGGCAGTGAGCCG # Questionable array : NO Score: 5.32 # Score Detail : 1:0, 2:3, 3:0, 4:0.46, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGTACGCGGGGGTGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-12.10,-12.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 5226-3777 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOAC01000001.1 Streptomyces californicus strain NRRL 2423 contig1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =================================================== ================== 5225 29 100.0 32 ............................. GTCGCGCGTCTTCTGCTCCGCCTCGGCGAACA 5164 29 100.0 32 ............................. CACTGGTCGCTCAGAGGGTGCAGCGCGTCCCC 5103 29 100.0 32 ............................. CCGTCCGGCTCGGCGCCGATGCCGGACGCTTC 5042 29 100.0 32 ............................. TCGGCCGCGCGCACCTTCAACTCGCGGCGTAG 4981 29 100.0 32 ............................. TGCTGCGCGACCGCGCCGCCAAGCACACCGCC 4920 29 96.6 32 .C........................... GACGACATCGAATACGTCCTCGACGCCCTGCG 4859 29 100.0 32 ............................. TCGACTCTGCGACGGCGCATTCCGAGTGGGGC 4798 29 100.0 32 ............................. CAACTGGTGCTCGTGGACACGGCGACGGCGTC 4737 29 96.6 32 ...G......................... TGCGGGATCTGGCTGGGGTTCACGAGTGTTCT 4676 29 96.6 32 ...G......................... CCGTAAACGGTCGCTTTGAGATCCTCGAAGTC 4615 29 96.6 32 ...G......................... CGGTACTTGACCTTGGTCGCCGTGCTCACGGC 4554 29 96.6 32 ...G......................... CGGCGCGCGCACCGAGCACCGCACAGCCGCAT 4493 29 96.6 32 ...G......................... AGCACGCTGAAGTGCGACCCGAACACGGGGGC 4432 29 96.6 32 ...G......................... AGGTGGTGGCCCGGCGGGCAGCGGCGGGTCGG 4371 29 89.7 32 ...G..............A......C... TCCCACGACTTCCGGGAGACCTGGACGGCCCG 4310 29 93.1 32 ...G...T..................... ATCGCGGCGATCGAGATCCTGCGCCGGCTGGA 4249 29 89.7 32 .C...............A.......A... GCCCCGGTCCTGGGCTGTGTCGACGCTGTATA 4188 29 96.6 32 .........................C... CACGGGCACCAGTACCCGCAGCCCGAGAAGGC 4127 29 93.1 32 ...........T...A............. CCGGCCGGTGGCGGCGCGACCCTCACCTACGG 4066 29 86.2 51 ........T............A.T..T.. GAGGTCGGTGATGGTTGGAGCGCCACCGAACGAGGTGAAACGGCCGTGGCA 3986 29 93.1 32 ...G..........A.............. GTCCAGATGCTGCGCTCGTAGCCCTCGACGAT 3925 29 100.0 32 ............................. GGGTGTGGGCGGAGAGTGGCGAAGCGAGCGCC 3864 29 100.0 32 ............................. GCCGCCGCCCTGCGGATGCTGCTCCAGGACGG 3803 27 82.8 0 ............--.A.....T...C... | ========== ====== ====== ====== ============================= =================================================== ================== 24 29 95.9 33 GTGCTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : AACATCGCCGCCGGTGAACAGGTACGGTGGCTGCCCCGCCGTCAGGCATCCGACATCCCTCTGCCCGGTAACGACTTCTGGCTGTTCGATGACCGTCTCGTCCGGTGGAACCACTTCGGCGGCGACGGCTCCTCGCAAGGGCCGGAGCACACTACCGACTCGACGGCCGTGAAGCTGTGCGGGAAAGGGTTCGAAGCCGTGTGGGATCGCGGCATACCGCACGACCAGTACGACATCCGCTGACAACCGCCCCCGGACGCCCCCTCCTCAGCGCCAACGAGAAAGGCTGCCGACGCCTGGAAGGCTCCGACCTACGATCCGGTCGCGGCTGCACCTCCTCACAGAAGCCGCAAGAAGCCTTCCCCTGCAATGAGGGACGTGCAGAATGACTTCTGTCGAGCATCAAGCAGACCGATTCGCCCCGAAGGTCCCGCATGACCGTTTCTCAAGAAGTTAGTAAAAACGAGCCTACGGCCACCTAAACCCGCTGGTCACGAACA # Right flank : TCCACACCCCCGCCCGACTCCACCCAGCCGGGCCCTCTCCCCCATCGCGATGCGTACACCCACGGCCCCCGTCCACCCGGCAACACCCCAGGTCGCGTGCCCTATGGTCTCCGTTCATGAGCCGAACCACGCCGCCCCGCCCGGTGAACATCGAGGCGCTCTTCCCGAAGCTGGGCGCGTTCCGCGGTACGACGACGCGGCTGCACCCGCGGCCCGGCCGTCCGGACGCGGCGGCCAGTTCGGTCGGCGGCCCCGTGCTGTGGCCGGCCGACGAACCCTGGCCGGTCTGCACCGAACCGCACAAGCGCAGCAGCGGATACCGCATCGCGGACGTACGACGCGAGCGCCAGGTGCTCGCGGACGCCTGGGCCCGGGACCGCCCCACCGATGAGGAACGGGACCTGCTCAAAGAACTGGGCCGCAGGCACCGTCAGCGCGAGATCGCCGACACCGATCCGATCCCGCTGGTCGTCCTGGCCCAGTTGTACCGGCGGGACGTC # Questionable array : NO Score: 5.59 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:-0.00, 8:1, 9:0.54, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGTGCGGGGCTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 7225-6464 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOAC01000001.1 Streptomyces californicus strain NRRL 2423 contig1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 7224 29 96.6 32 ............................T GCATTGCATTGACGAAATGGAATGCAATGCAT 7163 29 100.0 32 ............................. GGCAAGGCGGACCTGGCGGCGGCCGGGCTGTC 7102 29 100.0 32 ............................. CGAGTTGGCCGGCGGGGCGTCGGGGTCGTGAA 7041 29 100.0 32 ............................. TCGCGCCATTACTCGGTGAGTTCCGCTTTCCG 6980 29 96.6 32 ............................T CCGGCCATGAAGGCCGCGGTCGTCGGCCGCAT 6919 29 100.0 32 ............................. AACGCGCTCAAGCCGATGTTCGACGGGTTCAT 6858 29 96.6 32 .T........................... GAAGTTGCCAATGCAGGTGTGGAACAGGGCAA 6797 29 96.6 32 .T........................... CGTACGCGCAGAACGTCCCGTTCGTGGTCGTG 6736 29 100.0 32 ............................. GTCTTGAGGTCCCACCCGGTGAACGGGCCGAT 6675 29 96.6 32 .T........................... GCGAAGATCATCACCGTCGACCCCGGCGAACA 6614 29 96.6 32 .T........................... ACCTTCGACGGGCTCGCGATGCCCAGGGTGTT 6553 29 96.6 32 .T........................... TTCTTCATCGACACCTGCCCCTTGGCAGAGTT 6492 29 89.7 0 .T...........A...........G... | ========== ====== ====== ====== ============================= ================================ ================== 13 29 97.4 32 GCGCTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : GGGCATGCGTGATGGCTCCTGTGACGGACACGGGGACGGCCGACGACCGGGGAGGGAAGAGCCCTGCGCGAGCGAGCGCCGGGCGGTGGCCGCGCGATGACCGCGGGTCCCCCGGCTGCCGGGTGGCCGAAGTTGACGCGTCGAAGTCTCGCCGCGCACCACCCACGGGGTCGTCCCCCCAGCAGCCGAACCACGCCCTGCCCGAAAGTGCCACACTCCGCCGGCTGACACCCCTCGGAAGTGCTATCGCCGGGCGTCCTTCTTCCGACCGATCGCGGCGGCTGGGGGCGGGGCCCCGGGGGGCTGCCGCCAACAGTCCGGGGTACGACCGAAGTACGGGACAGGGCGCTGGGTGAACTGGCAGGCTGGAAAGCAGATCCCGGGGGTGCTGAACTCCGGCCACCTGGCGACCCATTCGAAACTTAAGGCCACATATGCCCGACTCTCAAGAAGTTCCCCAAAACGACCCCTCGGCCGGATAAACCCGCAGACCACGAAGG # Right flank : ATCAATCCCGATGCGACGCCGTGGTGAGTCAAATGACCCCACCCGCGAGGGCGATCCGGCCTCCGACCAGACCTACTCTGCATCTACGCCACTCATGTGCAGATCTGTGCACACAAGCACTCTTCCGGGAGCAAGTTCTGGAACGCCCCCTCAAAAAGAGTTACTTCGCGCCAGATCGCGATGCACACAACTACACACCCCTCAGCCGGAGAAGACCCATGTCGTTACAATTCATCGGGATCGACCCGCAGACGGGCGATGACGAGAGCCCGACCGTGTGGATCGACCGGGAGAACGGGGAGCTCGTCTTCCAGAGATGGAAGCCCGACCCCGAACTCGAAGCCGAATGTGCCGCCCTCGAACTGCCTGGGCACGCCGTAGGAATCCCCTAGACCGAAGCCGTGGTCCGCATCCCGGCCAGGATGGTGGACATGATCAGGGAGGCATGCGATGCCCTCGAACGCGCCGACGGCGTTCGCTGACCTGCTGGCCAAGTGCGA # Questionable array : NO Score: 5.75 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.62, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGCTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGTGCGGGGCTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [2-2] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [35.0-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 76016-74878 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOAC01000027.1 Streptomyces californicus strain NRRL 2423 contig27.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 76015 30 100.0 31 .............................. GGTCCGCCAGGAACCCGTCCGTGGACACGTA 75954 30 96.7 31 .............................T CCCTGTGCCCGTAGTGCACGACCTCCCACAC 75893 30 96.7 31 .............................G CTCGCAGGTCGTCATCCTGGTACCAGTCGCC 75832 30 100.0 31 .............................. TGAGCCGGAAGTCCGACTCGGAGTAGGCGAG 75771 30 96.7 31 .............................C GAGCCAAGGTAGTGCAGAGCTTTTACTCGGA 75710 30 100.0 31 .............................. CGCACGGCGGCTACTACTTCGGCCGCCCCAA 75649 30 93.3 31 ............................AC GGCGGGACCGATCGTTCCCCCCAGCGCGTCG 75588 30 100.0 31 .............................. GCCTGTCCAGGCGGTCCGCCAAAGCCACGGA 75527 30 100.0 31 .............................. TGTCTACACCGGAGAGGTGTGTCTGTTTTAC 75466 30 96.7 31 .............................G CCGCATCCAGGCACCCCCGGGCACCGTCTTC 75405 30 96.7 31 .............................C CAGCGGACGTGATCCGCGACGGAGTTGGTGG 75344 30 96.7 31 .............................T GCACGGCGCAACAACACTCGCCGAACACCTG 75283 30 96.7 39 .............................G GTGACCGGATGACCGGATGACCGACGACATGATTGACCG 75214 30 93.3 31 ............................AC CGGGGCAAAGCGAAAGGCAGGCGATCCGGTG 75153 30 93.3 31 ...........C.................C GCACCCCCAGCATCGTCTCCATGTGCGCGTC 75092 30 100.0 31 .............................. TCAGCGGCAGGGACTCGGACAGGGTGTACGT 75031 30 93.3 32 ............................GT GTGGGCGCAGCCCCACTATCTGTGCGTAATGA 74969 30 93.3 31 .........................C...G GCGGCAGTGATCGGCGTACCTGTACGCCGCT 74908 30 73.3 0 ..........TC.GG......C....TT.G | T [74890] ========== ====== ====== ====== ============================== ======================================= ================== 19 30 95.6 32 GTGGTCCCCGCGCACGCGGGGGTGGTCCCA # Left flank : ACCACCGCCCTCACCGCAGGACTCCCCGCCCACATCGACTCCCCCGCCGGCCTCCTCCACCGCCGCCTCACCGACAAAATCCCACCCCACATCCCCGGAGAGGCCGAAACCCGATCACCGAGCACCGCCAAACCGACCCACGAAGCGCTACTGGTCGAATGCACCAACTGCCGCCGCCCAGGCCCGCCGGAAGCCCTCCTCGCCGCCGTCAAAGCCCACGTCGCCAACCTCCGCAACCTCCTCAAACCCGCCTAACCCCCAGGCGATGGGTCGTTGTTGGGCAGGACGGCCACACCGCACCCCGGGGCCGACTCCACGGAAGGCAGAACCACGCCCCTTCCACCGAAGCCGGGACAATGAGACCTGTGGTACGCAGAATGGCACCAGCCGAACCACACACGTGACCACTTTGCGCCAGAAGGTGAGATATGCCGGTTTCCCAACAACACAGTAAAAACCGCCTCCCCGTCACCTAAACCCCCAGGTCACGAAGG # Right flank : CGGGTGTTCGCGGTGCCGCTTCGGTCGCCCCGTGTCCCGTAGACGCCCAGGGGCACTCGGCGCGGCACCGGGCCGCCCCGCCCAGTGCCCTACGGAGAGGCTCCCCGGTCGCTCAGCCCAGCCCCTCCTCCACCAGGGTCGCCCACTGCGCCACCACCCGGGCCCGGCGGGCCGTGTCGTCGGTGAGGAGGTTGGCGAGGCCCAGGCCGCGGGCCATGTCCAGGAGGCCCTGGACCGTTTCGCGGGCGCCGGGGCGGGACTCGTCCGCGCCCAGGAGTTCGACCGCGATGCGGTGGGTCTCGCGGCCCACCCGCGCTTCCAGTTCCGTGACGCGCGGGCGGAGCTGGGGCTCGTTGGAGGCGGCCACCCAGAGGTGGAGTGCGGCCCGGAAGAGGGGGCCGGTGTAGAGGTCGACCAGGGCCGCGACCACCTCCGCGCGGCCCTGGACGGGGAGCGCGCGCAGGGCCGCCGAGCGTTCCTCCGCGACGTACTCCACCGCT # Questionable array : NO Score: 5.50 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.46, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 4564-5512 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOAC01000032.1 Streptomyces californicus strain NRRL 2423 contig32.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================================================================== ================== 4564 30 100.0 31 .............................. CGCCGGCAGCGAGCCCGGTGAGGGCCTGGAG 4625 30 96.7 31 .............................T TCCCGCCCGTCGTGGCGCCGCTGGTGCGGCG 4686 30 100.0 31 .............................. GCAAGCGCTACGTCATGCAGCAGGTCCGCCA 4747 30 96.7 31 .............................G CCAGCTCGACCAGGATCAGCCGCTCGACCAG 4808 30 96.7 31 .............................A GGTCCGCGAGCAGCATGGGCATCATGTGCGG 4869 30 93.3 31 ............................GG AACTCCTCGTGTCTGACGACCGGAAGCCCGT 4930 30 96.7 31 .............................A AGATCATGTTGCGATTTACGTTCGGCGGTGG 4991 30 93.3 31 ................A............A TGCCTTCGGGGTTGAGGACGGCCAGGCTCGC 5052 30 100.0 31 .............................. TCACCGCCGGGGGCGGATGGACGACGTTCAC 5113 30 96.7 31 .............................G TACCCCGAGACGCGCGTGGCGACGCCGCCGG 5174 30 96.7 32 ............................A. AAGATGACCTTGGAGTTCGGAATCGGGGACGG GGGG [5193] 5240 30 100.0 31 .............................. TGCTCGGCCTCCGCCCGCTTGGCCCGAACGT 5301 30 96.7 90 .............................G CGTACGCCTGGCTCCAGTTGGAGGGCTACGTGTGGCCCCCGCGCGCGGGGGTGGCCCTCAGGCAAACCGGAATTCGGTCTGCCCCGGCTT 5421 30 90.0 32 ...........A.............C...T CGCGGCGGATGACCTGGCCCTCGGGATCGAGG 5483 30 83.3 0 .......................A.CAG.A | ========== ====== ====== ====== ============================== ========================================================================================== ================== 15 30 95.8 35 GTGGTCCCCGCGCACGCGGGGGTGGTCCCC # Left flank : CAACCGGGAGGTGTACTACCCGAACTGGGCAACCGCCGAGCCGGGCGAGCACGTGGCCGACGTCGCCATCCCCTTCCGCAGCGTCTCGATGCCCGGCCTCTGAAAGTCAACCGACGACAGTCGACACACACCGCAGGTTGCAACCGCCGACCTGCGCAAGCACCTCGGGAGACCGCCATACCGGCCCCGAAGGAATAGCCGCGCCCCAAGCGCACACCATCAGCTTCCGCCGCCCCCTCAACCCGTCGAACCCGTCGAACCCCAACCACGAAGCCCCTCCCGAAACGGAGTAGGCACACCGCACACCGGGGTCCAAAGCCTCGAAAGACAGAGCCGCACCTCTTCCATCGAAGCCGGGCCGATGAGACCGGGTGGCGGGCAGAATGACATCAGCCGAATCACACCTGTGGCCACTTTGCCCCGGAGAGCGAGATATGCCAGCTTCTCAACAAGTTAGCAAAAACCGCCTCCCCGCCACCTAGAACCGCAGGTCACGAACA # Right flank : ACGAATGGTCGCGCGGCCCACACCGTAGCCCGGACAAGGAACAGCCCTACAGATCACGACGTTTGGTCGTCTCCCTCAACGTCACTTCCCCCTGCGCGTTGGGCGTTGTGTCGGATGTGTGCGTGGTGGGCGTCGCGGAGGGGGTCGGTGATGTGGAAGCTGTGGTTGCCGGGGTGGTCCTCGTACAGTCCGCACCACTGCCGGTAGTTCTCGCGGAGGTGGTGGATGCGGTAGGGGCACAGGGTGAGGAGGATGAGCCGGTGGTGGACGCGGTGGCCTCCTGTGCTCGTGGTCCACAGGAACCACAGGCTCGCGGGTGGTTCGGTCTCGGCGGTCCACAGGCGGGCGGCGTGCTCGGTGGTCTCGTCGTGTGCGCCCAACTCGCACAGCACGTACGGCTTGTCGTCCAGGAGGTCTTCGGCGTCGTCGGGGCCGTCGTCCATGGCGAGCAGGGCGGGGAGCGCTTCGTCGGGCGGGAGGTTGGTGATGGCGGTGCATTG # Questionable array : NO Score: 5.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:-0.31, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 11508-11904 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOAC01000032.1 Streptomyces californicus strain NRRL 2423 contig32.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 11508 30 93.3 31 ............................GG GTTCCTCGGCTCCATCAACGCGGCCAGGTCG G [11525] 11570 30 96.7 31 .............................G ACACCACCTACCGGGGCCGGTACTGGCACCT 11631 30 100.0 31 .............................. CGGCGGCGAGGGTGGCGACGTCGATGGTGCG 11692 30 100.0 31 .............................. GGCAGCTTCGGCCTGAACCTCCAGCACGTCA 11753 30 96.7 31 .............................T CTCGGTTGCCCTGTGCGCCTTCCTCGGCCGA 11814 30 93.3 31 .........................C...T GGGTGCCGTACTCGTTGAAGGTGTCAAGCAG 11875 30 86.7 0 ..........TC.............C..G. | ========== ====== ====== ====== ============================== =============================== ================== 7 30 95.2 31 GTGGTCCCCGCGCACGCGGGGGTGGTCCCC # Left flank : ACCGACAAGATCCCGCCCCACCTCCCCGCAACGGCAGGAGTCGACTCGCCGGGCGCCACGGAACCCGCCCACGAAACCCTCGTCGAATGCACCAACTGCCGCCGCCCAGGCCCACCGGAAGCCCTTCCTGACGGCCTCTGCCGCCCCTGCCACCGCGCCCACACCACGGGCGGCAACGACACCGCCGCACCCACCCCGGACGAGGTCGCCGCCGTCAAAGCCCACATCACCAACCTCCGCAACCTCCTCAAGCCCGTCTAGCTCCCCGACCACCAGGCCCCTCGTCGGGCTGGTTGGGCACACCGCACCCGGGGCCCACGCCTGCGGAAGGCCAGGCCACAGCTTTTCCACCGAAGCCGGGCCGACCAGGCTGGCGGCGGGCAGAATTGCATCAGCCGAACCACACGTGACCACTCTGCGGCAGAAGGTGAGATATGTCGGCTTCTCAAGAAGTAAGTAAAAACCGCCTTCCCACCACCTAAACCCCCAGGTCACGAAGG # Right flank : CATGGACTGCCCCGGCCGCCCCGGAAGGAATGATCGAGAATGCGACCCGCCCGATTCCAGAACTTCGCCGTAGAAGCGCTCGCCAAGGCGCCCGACGTCAAGAGCGTCGAGCCGTGGCAGGAGCCGGACCGCCCCTTCGGCGTGCACATCCTGTTCATGAGCGGTGCCCAGATCTGGGCGGCCATCACGGCCACAGCCGCTCCCGGCGAGGACTACAAGCAGCCGGAGAATCCTGTCAGCTACGAAGCTCCCGCCGAGGTGGCGTACTCGGACCTGTATGAGGGCGGGAAGGTCACCCCACAACTGGCGGAGAAGTACCTCGCCGCAGCTTTCACGAACAGTGGCTCACCGGAGATCGAGACGGTATAGGCCTACTCGGTGAAAGACCCCGCCACCGCCCACCCCGGCCTCGGCCTGCGGTTTCACAGCGAGGCCCGGATCCAGTTGCTGTTCCAGCACACCGCCCGCTCCGGCCAGGACAAGGGCAACTCACCTTTCGA # Questionable array : NO Score: 5.58 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.00,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 352077-352231 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOAC01000004.1 Streptomyces californicus strain NRRL 2423 contig4.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ============================ ================== 352077 33 100.0 28 ................................. GGACGGCGCGGCCTCGGATCCCTCCGTT 352138 33 100.0 28 ................................. CCCGGGCGCACTCCTCGAGCGCGCTGAA 352199 33 90.9 0 .............................C.TC | ========== ====== ====== ====== ================================= ============================ ================== 3 33 97.0 28 GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCT # Left flank : TCGCTGCCGCTGGAGGACCGGGTGCTGCTGGTGGCCGCGTACTGACCCACCAACCTCACCCTGCGTCAACTCGCCGCGCTCTTCGGCGTCTCGAAGTCGGCGGCCGACCGGATCGTCGCCCACCTCGGGCCGGCTCTCGCCCTCCAGCCCCGGCGGCGGTTCCGCAAGGAGGCCGTGCTCATCGTGGACGGCACCGCGGGTAGGGAGGCAACGCCGGATCCAGCCCCCGGGCCACCACTCGAACCTGATACTGCAACGGAAGCGAAACCGCCACCCATCACACACAAGCACCCAGCACTGACATTGAATATCGCTACTGGCGTACCGACGGTCGTTTCTCGATCAGTAACGGTGGATCAGTAACGGTGCGCGGTGCTCGCCTTGGCGACCTGGCAAGCTGCAGCTGGACAGAGTGACGGCATGCGTCTGACTGAGCGCCTCACCCCCTCAAGAATGGCAAAGAAAATGCAAAGCCCTTCTTAAGGCGCAGTTCAGGAAGT # Right flank : CTCAGACTGTGTTGTTCGGCCTTGACGGCGCCCTCCACAGCGCAGGGTCACACGCCCAGGCACCTCACCGTACGGACCCTAACCGAGGTCTGGCATTGAACCTTTGCCAAGCTGGCGGTGTTGACCGCGAGCTGGACACGCCTGCGCAATGGCGAAGCTCCTGACAGACGGATCTCGACCAAGATCACCTGTGCCCGCCCGGAGCTTCGCGTGCTCGTACACCCATCCTCGGTCGATGTGCCCCATCGCGGTGGTACGCCGCCGTCCCAGCCTTCCTCGCTGAGAAGTTCCAGCACCCCTTTCCCCGATCTCACCCTCAAGGCGCCCCCACCCGTTCGACCACTACCTCCACGCTCGTATCCGTGCTGGCATGACATGAAGGGCCGCCTTCGTCCTCCAACCTCACCCCGAGCCTCGCACCGCGGCAAGACCCTGATCCAGCTGCACCCGAGCGAGCCGACCAAGAACGAAGAAGAAGCCCACCGGCGAACCGGTGAGGC # Questionable array : NO Score: 5.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.60,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 532-2088 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOAC01000007.1 Streptomyces californicus strain NRRL 2423 contig7.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================ ================== 532 30 100.0 31 .............................. GACCCCGGCTCAGCTCAGGGCCGCAGCAGAG 593 30 93.3 31 ............................TC CGCCGGGGCGGATTGGGCAGGCACCTTCGTG 654 30 96.7 31 .............................T CGGCAGCGGACATCCCCGCCGCCGGGGCGTC 715 30 100.0 31 .............................. GCCGCCTGCCGGGGGAGTGGGTCGGCCGGTT 776 30 100.0 32 .............................. CGATCCTGCGGGTCGGCAAGTGGCTGCTATCG 838 30 96.7 31 .............................G GCTGCCACCCCAGGTGGGCGGCGATGGCGTC 899 30 100.0 31 .............................. CCGCAGCGATCCGGGGAACCTGGCACGCCTG 960 30 93.3 31 ............................TC GTCCGTCGGCGCCGTACCGCGTCGTTTCGAC 1021 30 96.7 31 .............................G TCGTCGGCGAGGAAGGTCATGGCGGGGGCGG 1082 30 100.0 31 .............................. AGGACAAGCTGCGCGCACTCCACCGCGAGTT 1143 30 93.3 31 ............................TC CGGGTCCGGCCGGATCGCGGCAGCAGGTGCT 1204 30 96.7 31 .............................G CCGCCGCGTACGGGGCGCTGACCGGGGACGC 1265 30 93.3 31 ............................TC CGCCGGCACGATCCCGGCCGCCGTCGCCGCG 1326 30 96.7 31 .............................G TCGACACCCTCGCAGCCAAGCTCACCGAGAT 1387 30 96.7 31 .............................C ACGTAGGCATCGTCACCGCCACCATGTCGGG 1448 30 93.3 31 .........................C...G GGTTGAGCCCCGATGTCTCCGCCTGGTAATT 1509 30 96.7 31 .............................T TCCGGGGTGTTTACGACTGGATGACCAAAGA 1570 30 93.3 31 ............................TC ACGCTGCCTGCGGACAGATACGGTCAGATCA 1631 30 93.3 31 ............................TC CTCCGTGGCCGGCAGCATGGGCGACCGCGGA 1692 30 96.7 31 .............................G GCGCTCCCGGTCGGCGGATACCGGGGCCGTG 1753 30 100.0 31 .............................. TCCTCGTCGGCGCCATGCTCGACCCCCGCAT 1814 30 96.7 32 .............................T TGTAGATGCGGGCGACTGTGCCGTCGCCGTCG 1876 30 96.7 31 .............................C TCGACCCGCCCCTCAGTTTCGACCGCGCCGA 1937 30 96.7 31 .............................C TCCTGGACACCGGCCACCACACCGGAGACGT 1998 30 93.3 31 ............................TT ACGCGATCGACCACTACAAGGTCGTCCCGAG 2059 30 80.0 0 ...........A..........C.AC..TG | ========== ====== ====== ====== ============================== ================================ ================== 26 30 95.8 31 GTGGTCCCCGCGCACGCGGGGGTGGTCCCA # Left flank : ACATCGACTCCCCCGCCGGCCTCCTCCACCGCCGCCTCACCGACAAAATCCCACCCCACATCCCCGGAACGGCAGAAGCCCGCTCACCGAGCACCGCCAAACCCACCCACGAAGCGCTACTGGTCGAATGCACCAACTGCCGCCGCCCAGGCCCACCACAAGCCCTCCCCGACGGCCTCTGCCGCCCCTGCCACCACGCACACACTCACGGCGGCGAGTCCACCACCCCCACCCCGGACGAGATCGCCGCCGTCAAAGCCCACGTCGCCAACCTCCGCAACCTCCTCAAACCCGCCTAACCCCCAGGCGATGGGTCGTTGTTGGGCAGGACGGCCACACCGCCTTCCACCGAAGCCGGGACAATGAGACCTGTGGTGCGCAGAATGGCATCAGCCGAACCACACACGTGACCACTTTGCTCCAGAAGGTGAGATATGCCGGTTTCCCAACAACATGGTAAAAGCCGCCTCCCCGTCACCTAAACCCCCAGGTCACGAAGG # Right flank : GCGCCCCCGCCTGAAGTGGCAGGTCACACCCCGCGCGGGTACTCCCCCTTACCCGTTCCGATGATCCCGCCCGGGTCCCGCAACCACACCTGCTGACCCCGGCCAGTCACCGTCAGCCCGAATTCCTCCGCACCAGGGCGACCGGCCGACTCGTACTCCCACCAGGTCTGCTCGATCTCTTCCCACAGCAGCCCGATCCCGTACTGCCACACCTCCTCTCCCGAAGCCGTCGAAGCGCCACCGACCTCACTCGTCACCCACACGCGCACCCCGTCACCGGCGACACTCTGGTGAATCATCCGCACACCGGGCAGTCGCGCCCCCGCGAACAACGCGAACCCGAGGTCCAGCAACCGGGCCGGGTCCAGACCGGCCGCCCGCGCTCGCCCCCTCCCCCGTACCTCATGCAGATCGGGCACGCGGTGCGAGCGCATCGGCACGTACGTGGCCCCGCCGCAGAACGGCCCGACCGCGCTGCCGTCCCCCTGAACCCGTAGCCG # Questionable array : NO Score: 5.36 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 7371-7827 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOAC01000007.1 Streptomyces californicus strain NRRL 2423 contig7.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 7371 30 96.7 31 .............................T TCTCCACCAGGAGGTCAAGGTCGGGGTTCAT 7432 30 96.7 31 .............................A CCATCACGTTGCCTGATGTGCCATCGCGCGA 7493 30 96.7 31 ............................G. GACCTCCGCCGCCACGGCGACGGACGAGGCA 7554 30 100.0 31 .............................. CCGGGCATCGCACCCCAGTGCGTGTAGGACC 7615 30 96.7 31 .............................G CACTGTTCACGGATGAGGGCCTCCGGGCCTT 7676 30 100.0 31 .............................. CACTCCAGCGCCTACCGTGAGCGCCGCCCCG 7737 30 100.0 31 .............................. TCGGCGACGCCATCGCCCGCCGCGTCGTGCA 7798 30 90.0 0 .....................C......GA | ========== ====== ====== ====== ============================== =============================== ================== 8 30 97.1 31 GTGTTCCCCGCGCACGCGGGGGTGGTCCCC # Left flank : ACATCACGGAGTTGGGCAAGCTGAGCGGGGTCGGTCACTCGCTCGCCCTGAACGAGTACGTCGGTGGTGCCTTCGACCTCGTAGAGGGTGGGGCCATCCCCGTCGTCACTGGTGGTACCGAGAGACCTGAGAACCGTCATGACGCCCTCCGCGTGCACTGAGTGGAAGCCCAGGATGTGATGGATGGTGAGGGGGTGCCGCCGGATCGCGGATGGAATTGCAGATCGCTCAGGTGGCCCGGGAGTTGAGCGCGGCCAGCAACGGCGGCACGGACAAGCGTAAGCAGAAGGGCTACCACGCACACGCCAGGTACAACGCATACGGCGCACGGCGCCCCAGCTCTCACGCCCAAGCCGAGCCGGCCGAACCAGCGCCAGGCACACTGACACCAGCCGAACCGCACATGCGTGACCGCTTCACACGAAAGGCGAAAAACGCCGGTTTTCCAAGAAGTAAGCAAAAACCGCCGGTCCGCCACCTAAACCCCCTGGTCACGAAGG # Right flank : ACGTACAACGGGTGGTGGCCGCATCAGTGACTGATCAACGGCCGCCAACGCTTCAGCATGTTGAACTGTGCGATCGCGGAAAACAGTTCGACCAGGCTCTCTACCGGCCTTGAACTGGCGCGCTCGCATGTTGAGGTCTCGCGCATTCCAGTTCAGAGCGCCCCGATTGGTCACTTTGGGCATGTGGGTGGCGTCCAGGGCCCGGCCCGGAGTGAGTATGTTCACCCGATGGTGCCTTCGAAGCTCTTCGTGAGGTGCTGTTCAAGGCCGACGCGGAGCGGATGGCAGAGGGGCAAGCCGTGGAACTTCGTCGCCAGTGAAGCGCCGTTGCATGAGGCGACCTTGTGCCCACCGATGCCGGGTCTGCGGAGCAACGATTCGCACTGTGCTGATCCCACCTGCGGGGGCCGGGCTCTTCGTTCCCCGAGTGAGGAAATCGGTGTGACCGGTCCGCCGCCCTGGATGTCGGTGCCGACTGCTTACATGAGCCCATGGACACC # Questionable array : NO Score: 5.80 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCACGCGGGGGTGGTCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //