Array 1 17242-16183 **** Predicted by CRISPRDetect 2.4 *** >NZ_SIHJ01000011.1 Posidoniimonas corsicana strain KOR34 KOR34_contig00011, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 17241 36 100.0 36 .................................... GATCGGCGAGTCTGTGGACTGGGCGGCCATGATCGC 17169 36 100.0 38 .................................... GATCTCGATGCGGCGGCCGAGCTTGATCGACTCCCACG 17095 36 100.0 38 .................................... GTTGCTTGGCCACTGCCTAAAACTTGCGCACTGGCAGC 17021 36 100.0 36 .................................... GTGGGGCGTCTCCACGATCCCGTCGATGCACCTGTA 16949 36 100.0 36 .................................... GGGAACGCTGATCGTCCCCGGGGGCGACGGTGAACA 16877 36 100.0 38 .................................... GAGCTTAAGCGAAGCAGGATCAAACCCATGTCAGACCG 16803 36 100.0 36 .................................... TTTGCCGCCCGCGATCTTGTGTTTCATGCCGCGATT 16731 36 100.0 38 .................................... GTTCGCGGCGGCCCTGTCACTCGCCAGCTAATCGCGTG 16657 36 100.0 36 .................................... CGGCCGGCAGGATGACGCGGCCGTTCGCGAACTGGA 16585 36 100.0 38 .................................... GCCCTTGCGACCGACTCCGACGCCGTGGCCGTGCAAGA 16511 36 100.0 37 .................................... TTGCAGTCGGCCCACAGGTCGGGCTGGCGGCGGTAGA 16438 36 100.0 36 .................................... GACAGCGAGCGACGCAAGAAGGTCGCCGCGTGGGTC 16366 36 100.0 36 .................................... GGGCAGCGAAGAGACGTGGTTCGGCGACTTCCAGTA 16294 36 100.0 40 .................................... ACCCGGGCATCGCGCTGACCCCCGCCGCGGGCGACCTCGA 16218 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================== ================== 15 36 100.0 37 GCTTCAATGAGGCCGGGGCTGATTAGCCCCGGAAAC # Left flank : CGATCCCTCGCGAAGGGCGCCCGACAGCCAGCCGGACGTCGTCTCGGGCCCGAGGCCGTCCTGAAGCGCCTTGATCGCGGCCATGTGCTGCCCGCTGTTGATTAGGCCGGCGTCGCGGACAGGGTCGACCCGCTATTGGCCTGGCACGAGAGCGGTGTCAGGGGCGGCTGCTTAGACTAGCCTCCATCGGATCGAATTTCGCTACTGCCTTCTGCGGGGTCACCGAAGTATGGAGGGGACAGATTCTAAGTCCGTCGACGGATGCCTCCAAGGATACGGCCTTCGGCAGTGACAAACGGAGCTGAGACTCATTGTGTGTTCGCATCGGTGCCTCTCACCTCAGCGACTTTCCGTCGATGCTACGGCCGTTCGGTCGATGCAACTTCGCTCATTTGACGCCGCCGCAGATGCGCCAAGGTTGAGGTGACCGATGAGGAAGCTCAAGGTCTGATCAGCCCCGGAACCCCGCAGAACATGGCGAACGCAAACAATGCCCCAGC # Right flank : CGCCCGCTTCCCAAGTCGGTTGCGGGCAAAGGGTCGCGACACGCTCTGCGAGAGCTGCCGAGTCGCCGAGCTCGGCTACGATCGAACTCGCTGTGCAGGTTGCCAAAGACCTTGCCTCCCAGTGGGTTGCGTCCGCGAGAGGTCCCCGGAGTTTTCGCATCACCCGAGCACTCGCGGTGCGTCGTTACACGATTGTAGGGCCTCGATCCGGGGCGAGCGAGAGCGGCGCCCCCCAGAACTCGATCGATTCGTCGCCGCGGCCATTGATCGGGCCGAGGTTGGCGATCATCACCCGGTCCTCGTCGTCGTGCAACACGCCCGCCAGCCGTTCTCGGAGGTCATGTAATTCGAGCTTCGTCAGCTCGCAACGGAAGACCGAGAACTGCAGCGGGTCGCCGAACCCCTTCAGCGTCTTGTGGACGATGCGGAGGCGTTTGGGCGTCGCGATGTCGTAGCAGATTAGGTAGGCATGACGCATGGCGACAACCTCAGCGAGTCGT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATGAGGCCGGGGCTGATTAGCCCCGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.90,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [30.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA // Array 1 667815-671491 **** Predicted by CRISPRDetect 2.4 *** >NZ_SIHJ01000001.1 Posidoniimonas corsicana strain KOR34 KOR34_contig00001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 667815 31 100.0 36 ............................... ACCCACGCCGAGCGGCCCACCAGCTCGTTGGTGGTC 667882 31 100.0 33 ............................... TACGGCGACGACGCGCCGACCGACGCGGACGCG 667946 31 100.0 33 ............................... TCGCCGACGCTCTGGGCCTTGTCGCCGATCATC 668010 31 100.0 33 ............................... CAGCTCATGTCCGACGTGTAGTCGGGGAACGTC 668074 31 100.0 34 ............................... GGCTCTCCGACTGAGTGATTTGCAGCAGCCAAGG 668139 31 100.0 33 ............................... CACGACGACGCGCAGGTCTGCGCCGGACCGGTC 668203 31 100.0 36 ............................... AATCACGCAAGACCCAGTGCGTGTCAGCGGCGTCGA 668270 31 100.0 34 ............................... CGCGGAGCGTGGCGGACTACGGCTACCACCGGCA 668335 31 100.0 34 ............................... GCCGACGCGTTGCGTGAGGCCGACGGGGACCTGG 668400 31 100.0 33 ............................... CTCGGTATGGTTCACCGAGAACTCGACCAGATC 668464 31 100.0 36 ............................... AACGAATCGATGGCGTGCCTCCGCGCCCAGCTCCGC 668531 31 100.0 34 ............................... ATGTCGAACCTGGCGTCGGCCTGTAGCTGCCGGA 668596 31 100.0 34 ............................... TACTCACTCCTGGGGTATCAGGTCCCCAAATGCT 668661 31 100.0 36 ............................... AGCACCACGCCCGACGGCACCGACGACCTGACCGAG 668728 31 100.0 34 ............................... ACAAACCAAAGGACCGGACCAACTATCAACTTGT 668793 31 100.0 34 ............................... CGCGACCAGGTCCGCGTGGTCGTCAACCACCTGA 668858 31 100.0 36 ............................... CAGTTCGCTGCAGCCAATCGTCGAGCGGTGCACGCC 668925 31 100.0 34 ............................... TATAGGAGACCGACAAGTGATGCGAGCAATCCTG 668990 31 100.0 34 ............................... ACACCGTAAGCATCCGAGTCCACGGTCAGCTGGT 669055 31 100.0 35 ............................... TGGAACGACGCCGCGCAGCAGTTTGTCGACTTCAC 669121 31 100.0 32 ............................... TCGACGTGGAGCCAGGTTGTCACGAGCTGGCC 669184 31 100.0 35 ............................... GTACTGGCCGGCGGCCTCTTGCAGAGCGGCGGGGC 669250 31 100.0 33 ............................... CCACTTCGTCGACGGCTGGCCGTCCAGCGGTGA 669314 31 100.0 36 ............................... TTTGAGGGGTAGCGTAAGGGCGCGGCTGCCTCGGCC 669381 31 100.0 33 ............................... TCCCGCTCCATGAACTCGTCAACCACCCGCTGG 669445 31 100.0 32 ............................... ACGTTCGGCCGGAGTCACTTTGACGACTCCTG 669508 31 100.0 36 ............................... AGAGCTCAAGGCTCGGCAGCAGGGCGCTGTGCCCAC 669575 31 100.0 36 ............................... CTGCGACACCAGTGGGCCGAGGGTCCGCCGCTGGCC 669642 31 100.0 33 ............................... AATCCGTGCCCGAGCGGGTTCGACTCCCGCCGC 669706 31 100.0 35 ............................... TCGTCCGCACGGATCTGTAGCGACAGTCCACCAAC 669772 31 100.0 34 ............................... GCCTTGAGACACGGGCCGCAGCCATCGGTCTCGA 669837 31 100.0 34 ............................... CCCCATTTGAAGATCACCCACGCCATCGCCGACG 669902 31 100.0 34 ............................... CGCGAGTTCTCGCCGAGAAGCTTGACGCGCCGCA 669967 31 96.8 35 ..............A................ CCAGTAATGCTGCTGGCGGAGATTGTGCCCACCCC 670033 31 100.0 33 ............................... CGCGCCCGCGTTGCGTGGGAGTCAATCAAGCTC 670097 31 100.0 33 ............................... TTCCTGGCAATCGCGGTGGTCGGCGGCATTGTG 670161 31 100.0 34 ............................... CTTGCCGCCTTGGCCTTGAGCTTGTGAATGTCGT 670226 31 100.0 34 ............................... TGCGGACGTTAGTAGCAAGTTAGTAGCAAAGCCC 670291 31 100.0 33 ............................... GCGGCCGTGAACTCGTAGCGGACCTCGTACCGA 670355 31 100.0 33 ............................... CGGGTACTCCAGTGCGATCAGGCGTTGCTCACC 670419 31 100.0 35 ............................... AGACTGGGGGTCAAAAGGTCGCAGGTTCGAATCCT 670485 31 100.0 35 ............................... TTCTTTGCCATCGCTTGTCACCTTTAGGAGGTCAG 670551 31 100.0 33 ............................... CGGGTACTCCAGTGCGATCAGGCGTTGCTCACC 670615 31 100.0 35 ............................... CGTCTGGCGTGGTGCTGAAGATCAGCCGACCGGGC 670681 31 100.0 34 ............................... AGGCTCTCGTCCGTACGGATGCCAACGAAACACG 670746 31 100.0 35 ............................... CGCGAAACGTCCAAGGGCTACATCCCGCACGCCGG 670812 31 100.0 33 ............................... AACCAGACCGTCGCGAACTGCATGCGTGTCGTC 670876 31 100.0 32 ............................... TACGCCCAGGCGGGCACGCACAAGGCGTTCAA 670939 31 100.0 35 ............................... TGGTAGGCGAGGGCAACGTCGCGGAAGGCTGCTAC 671005 31 100.0 35 ............................... TACGACCGGGTGTTTGTGCTGGAGTCAATCGGGGC 671071 31 100.0 34 ............................... CGCTCGATGATCCACTCCTTGGGCGGGCCGGTCT 671136 31 100.0 36 ............................... ATGGCACACCCAGCCGAACCGCTCGGCGTCCGTGTC 671203 31 100.0 33 ............................... TCCCCAGACTTCGACCACCGCCGGCTGCGACGG 671267 31 100.0 33 ............................... CCTGTTGGTCGCGGGATAGAAAACCGACCGGAA 671331 31 100.0 33 ............................... GGCAGCGAGTACGGCGGGGCGGGCTCGGGGCGT 671395 31 100.0 35 ............................... TTGGTGTTGTCGTAGCCGGTGTAAGTCTTGATGTC 671461 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ==================================== ================== 57 31 99.9 34 ATCGCCCCCTCACGGGGGCGCGGATTGAAAC # Left flank : GGAGAAACCTGTTGTACGTCCTGGTCACCTACGACGTCGCCACCGCTACCCCAGGCGGCGCGAAACGCCTCCGCAGCGTCGCCAAGGCCTGCTTGGATTATGGCCAACGCGTGCAGAACTCGGTGTTTGAGATGAAAGTCGATCCCGCCCAGTGGACCGAGTGCCGGGCGCGGCTCCTCAGCCTGATCAAGCCCGAGGAGGACAGCCTCCGCTTCTACCATCTCGGGGCGAACTGGCAGCGTCGCGTCGAGCACCACGGCAGCAAGCCGGGGTATGATGTCGATGGGCCGTTGATCATCTAGCCAAGAGTCCGTATCGGCGTGCAGCGAACCCGGTGCGCTCGTGCTTTTCCCGGGAGGTTCGCGGATTCCACAACCCGTGTGGCATTCGAGCCTTATGGGGCCTTGCAATCCCGGCCTGCGTCTCGGCGTGCCTCATCAGCAGCCCCTCGCGGATCGCTTGACCCAAGTCGTTACACGCAAGAGACTAGGCGGCTCGGG # Right flank : CCACATGTTCGTGACCGCTGATTTTCATCTGCCAGAGTCGCCCGTTCTGCGAGGTAGGCCAGTAGCCGCAAAGTAGTGAATACCGCCCGCAGCGTTGAGGGAGCGTTCGTGCCGACGGTTGTGGCAATCTCAGCAGGCTCCAGCCTGCTTGGGCTCAAGGAAATACTGAAGATTCTTGAGATTCCACTCTGGCGTCAGTGAGGCAACGGCGGCAGGACCGTTAGGAGTGGTAAACGGAGAACGACGCAGGCGGCGGCATGGAGTGAGAGTGTGTCTTGGAACGAGGTTCTTTGAAGGACGTTGGGCAGCTGCAGCGCTCAATTGACGGCCCACCAACGTTCTGACACGTACTCGGCGAGCTTGAACAGCATGGTGAGCGAGTTGGTGCGTCTGCCGCAGCCCTTGGTCCTTCGGTAATGCAGTTAGATGGTGGAGAAGGCACTCTTAATCAGATTCGGTGGTCTGCAGGTGGCCCCACTACTCGGGTAATTCGTAGAAGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCCCCCTCACGGGGGCGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCCCCTCGCGGGGGCGCGGATCGAAAC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-7.10,-7.30] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [35.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //