Array 1 157301-155880 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANSE01000005.1 Neisseria meningitidis 2007056 NM2007056.contig.4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 157300 36 94.4 30 ........G...A....................... TTTTTGTATCCATTCCCAGCCGGAAATTAA 157234 36 100.0 30 .................................... CTTCTGCCTTTTTACAAGCTCGCTTTCTTT 157168 36 100.0 30 .................................... TTTGGTAAAGGTTTCTGTTGCGACCCGAAT 157102 36 100.0 30 .................................... CTTTAACTTTGACCGTGTGCAATCCAGTTA 157036 36 100.0 30 .................................... AACGGCAACCCACTAAATTTTGCAAATGCG 156970 36 100.0 30 .................................... AGTATTCGTCGATGATGGAAACTCGAGCAT 156904 36 100.0 30 .................................... ATGATGCAGGCTGCTCCGTCATCGTCTGCA 156838 36 100.0 30 .................................... CCAAATAGAAATACATACGCCGAGTAATTA 156772 36 100.0 30 .................................... TTTCTTTTTGTAATTGTTCTGCCTTTTTTA 156706 36 100.0 30 .................................... TACCCACGGCGGAAACCATTGCCACAAAAC 156640 36 100.0 30 .................................... TTAAAATAATAACCCAATACACGATGTTAA 156574 36 100.0 30 .................................... TCCTGCCAATTATCATACATAAGATTTTGC 156508 36 100.0 30 .................................... TTGCGTCTATGGTGTCCTTTGAGATGTCCA 156442 36 100.0 30 .................................... AAAACCAACCGGGTATTCATACACAGCCAA 156376 36 100.0 30 .................................... CCGTTGATGACGGATGTGTCGGGTTGCGGA 156310 36 100.0 29 .................................... TCGGCCGCTTTATTTCTGCCATATCGACG 156245 36 100.0 30 .................................... CCTATGCCTGTTATTGTTTTCAGCCTTTTG 156179 36 100.0 30 .................................... TTTAAAACCGCAAACCAGTTTGTATCCTAT 156113 36 100.0 30 .................................... AATAACAACCATTTTGTTATTTCGATTTTT 156047 36 100.0 30 .................................... TCCCGACATTGACGGAAAAACCCGAAAGCA 155981 36 100.0 30 .................................... TTATGCCGTTTTCATCCGGCTTGAACATTT 155915 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 22 36 99.7 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAACGGTCGATGTGTCTGGCAATCATGGCTTGGGCGGTTTGTTGAAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : ACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : NA //