Array 1 87540-85913 **** Predicted by CRISPRDetect 2.4 *** >NZ_JRMO01000010.1 Taylorella equigenitalis strain MCE529 MCE529_c3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 87539 32 100.0 34 ................................ GTCATACATGAGACTAGTTAAATAATCATAGCTG 87473 32 100.0 35 ................................ TGCAAGTAATTCACACGCCTTAACTTTTATGACAT 87406 32 100.0 35 ................................ AACAGAGTCCATTAGAGGATTTGCAGATGAATCAA 87339 32 100.0 34 ................................ GACGAGAGTCTAACTAAGACACCAATCGCAAGGT 87273 32 100.0 34 ................................ CAAGATTCATTAACAGAGCTATTTCAGCTTACAA 87207 32 100.0 34 ................................ TCCGCTGGAAAACAGCTTATCAAGTATGGCTCGA 87141 32 100.0 34 ................................ TTTTCTCAATCATCGCTTGTGTAACCCCAAATTC 87075 32 100.0 34 ................................ CTGAGATTAAAAACTTGTTAGTTGAAAATAATAT 87009 32 100.0 35 ................................ GGCTAATGTCGCGGAAATGCTAGCACCTGCTTGAT 86942 32 100.0 34 ................................ GGAACGTTCGAAACTACAGCATCAAGGGAACCCT 86876 32 100.0 34 ................................ CGCACGTCTTAAACGACCACGCATGCTTTCTTGC 86810 32 100.0 35 ................................ GATGTGAATTTTTCCACTGTTTCTTTTTCGTGCCC 86743 32 100.0 35 ................................ GACTTCCATACTTGCTGTGCATATCTTCAAGATAA 86676 32 100.0 35 ................................ CGCAAATAATCGAATGGGTACACCGTAAAACTTGG 86609 32 100.0 35 ................................ TTAATTAAGTAAAAGGACAAAAAAAATGAATCAAG 86542 32 100.0 35 ................................ GAAGTTTCGACTGGATACGCTTGCAAATTAACAGA 86475 32 100.0 34 ................................ GAACGTCACCAACTTTACGATTGCTTAAAGGTCG 86409 32 100.0 35 ................................ CTATGGCAATTAATGCCACTTCATTTTTTATGCAA 86342 32 100.0 34 ................................ GATTGTGTAATCTCGTCCAACAATATACTTCATT 86276 32 100.0 35 ................................ ACGTGACAATATGAGCACGGTTGCTGATTGGTTCG 86209 32 100.0 34 ................................ GTAAAAAACATCGAATAGAAAAAGCACTAATTGG 86143 32 100.0 33 ................................ TCTGCCGAAACTATACGGTCACCACCGAACCAG 86078 32 100.0 34 ................................ TAACTGGAAGGACGGGTTGAATGGCACTTACTGA 86012 32 100.0 36 ................................ TTCTAAACTACTTATTCGGAAGTAAACTTCAAAAGT 85944 32 87.5 0 ....T.....T...T..A.............. | ========== ====== ====== ====== ================================ ==================================== ================== 25 32 99.5 34 TCAGCCACGTACGCGTGGCTGTGTGTTTAAAC # Left flank : ACAAGAATATCCTCCCTTCTTAATGAGGTAAACATGTTAGTACTTATTACTTATGATGTAGATATGAAAGACAATTCAGGTGCTAAAAGATTGAGAAAAATTTCGAATGCCTGTCAAAACTTCGGACTTAGAGTTCAATACTCGGTGTTTGAATGTGATATAGACCCAGAAAAGTGGATAAAATTAAAGAGTACTTTGCTTGATTTATACGACCCTGAAAAGGATAGTTTGAGATTTTACAATTTGGGAAGTAAATGGCGGGGAAATGTTGAGCATCACGGTGCAAAACCTTCGATAGATATTTTCAAAGATCCTTTAATTCTTTAACGCTAACCACTAGTTGACATTAGACTAAGATAAGATTAGCGATACTTTTGTTCTTTAAAAATCAAATAGTTTTTGAACTTTTGCTAAAGTTCTAATTTGAATCCTTATCACTTTAATAGCTTAGCGATTATAAGCTTTAAGAATAAGTACTAAAGCCATTTATAATGATGGCT # Right flank : GACAGATTAAGAAATGAGTTATAGTTGAATCTATAACTGTCAAGTCTACTTGTTTTAAAAGCTTAACTAGTATCCCATGTATCCATTCTCACATTAAATGCAATATACTCAACTAGCTTTGTTTTTAAGTATATTTATCAATACTGTTACAACACTAACAGGCAAAAATTCAAAGTAGCTTCTAAATCCTAAATCGATTTTAAAATCGAATTTTGTTTTACATAGAAAATCCTTATTTTTAATCACTTTCTGGAAATAAAATTTCTTTATTATTTATAAGTATTTTTTTCTATCGATTACTAAATTGAAATTGGGATTAACCTTTTATTTACCTAGGCTCTGGGTAAGTATTAAAATTAACCTCTTGCTTGCAAAAAAGTAAGTGTGTTTAAACAATTTTTAATTGACTTTAATCTGAGTCGTGCAGCCTTAGGGCTGCACATCCATTTTTAGGAAATCATATAAATGTTTATAGCACATACTCGGACTCTAGACTCTGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCAGCCACGTACGCGTGGCTGTGTGTTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GCAGCCACGTTCGCGTGGCTGTGAGTTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.90,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //