Array 1 2573693-2573198 **** Predicted by CRISPRDetect 2.4 *** >NZ_DF384213.1 Clostridium botulinum B str. Osaka05, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 2573692 30 100.0 37 .............................. CAAATACTATTCCATTGCTTCCAACTCCGCCAATTAT 2573625 30 100.0 37 .............................. CTTGTTTAGGTGAGTATGCCGACATTTGTATTGTTAA 2573558 30 100.0 37 .............................. CTTGTTTAGGTGAGTATGCCGACATTTGTATTGTTAA 2573491 30 100.0 35 .............................. TGGTTTATATCCTTTCCGTATATAGGGAAGTTATA 2573426 30 100.0 35 .............................. TTTTTAAAGCACCTATTCCAGCCATTACCTCAAAA G [2573425] 2573360 30 100.0 36 .............................. CCATATTGACCTGCACTAACATATCCATATAGTATT 2573294 30 100.0 37 .............................. CAAATAAAAAACACCTAAGGTTTTAATTTACCTTAAG 2573227 30 86.7 0 ......G.T...................GC | ========== ====== ====== ====== ============================== ===================================== ================== 8 30 98.3 36 GTTGAACAGTAACATAAGATGTATTTAAAT # Left flank : TTAAAAAATCTGACTTATCCATTGAACATTAACATGAGATGTATTTAAGCAGAGAACCCAAATCTACGATTTGGTGTGAGTCGCTTACTCCTTCGAGGAGAGGAGAAGGAGTTTCATTAAGTGATTAGACATTTAGTATTTTAAGTTTAGGCATGATATGAACCCAATAAAATAATAATTTTAAAAATGAAAAGTATGATTTATAAATTTATTAGCTTAAAGCAGCTATTCTTAATGGAATGGATACTTTTTTTAATTAAGTTTTATATAAATACAAATAAATCTAATCTTAGTGATTAGTCAGTCTGATCATAAGTAAAATGTTTTTCCAACCACATTTAATTTTAAAATATATCTTAACCCTTCAAATATAAGGCTTAAGGTATGCTTTATTAAAATTTTATAAAAAATGAGAAACGGTTGGGAAATTTTCTTTGAAACCTTGTAAAATCAATATTTATATGTTATTCTTAAAACTAAGGAATGGCTATTTTACTATG # Right flank : AGAGAACTTAAATTTGTGATTTGGTGTGAGTTGCTTACTTCTTGGAGGAGAGGAGTAGGAGTTTCATTAATTGAATTTTTCCAGGTACAATAAATTTGCAAATCTATTCTAGCCGTTGATATATAAGGCTTAGAATAGGTCTTTATCATGTGCTTATGAAAAAACAAAATCACTTGGGAAACTTTTTCTAGAACCTTGTAAAATCAATGGTTGTATGATAATCTTAAAAATAAGGAATGGCTATTTTATTATGATTGAACATTAACATAGGATGTATTTAAATTCTTTTATGATTAAAATAGCATTGTCACCTTTTTGTATTGAACATTAACATAGGATGTATTTAAATAAATTAAAATCCGTGATTTTTTTCCTTCAAAGTTGTTTAGTTTTTAGAGCAGCGTTGATAATATATCAACTTTTAAGAGAAGTCATTTCTGACTTCCCTTAAGTGGTATTTTATTTAATTGTATAAAGTACATTAGTTAAAACTTATTTTT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAGTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 2 2574143-2574500 **** Predicted by CRISPRDetect 2.4 *** >NZ_DF384213.1 Clostridium botulinum B str. Osaka05, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 2574143 29 89.7 36 GC...................A....... TGGATAAGTCAGATTTTTTAATGCTATGAAAGTAGG 2574208 29 100.0 38 ............................. TCTATGAAAAATAGCGCTGGGCTGACTGACAAAGCCTT 2574275 29 100.0 37 ............................. CGAGGTAAAATAATATGCCAGGTGCAGCAATAGGAAT 2574341 29 93.1 36 ............T.T.............. CGTGCAAAGAAGTTTCACTATTACTGGTGTAGACTA 2574406 29 96.6 37 ............T................ CTTAAAGCAAAAACATTTAAAAGAAAAAGCAAAGGTG 2574472 29 96.6 0 .....................C....... | ========== ====== ====== ====== ============================= ====================================== ================== 6 29 96.0 37 ATTTAAATACATCTCATGTTATTGTTCAA # Left flank : AAGCAATGGAATAGTATTTGATTTAAATACATCTTATGTTACTGTTCAACCATAGTAAAATAGCCATTCCTTAGTTTTAAGAATAACATATAAATATTGATTTTACAAGGTTTCAAAGAAAATTTCCCAACCGTTTCTCATTTTTTATAAAATTTTAATAAAGCATACCTTAAGCCTTATATTTGAAGGGTTAAGATATATTTTAAAATTAAATGTGGTTGGAAAAACATTTTACTTATGATCAGACTGACTAATCACTAAGATTAGATTTATTTGTATTTATATAAAACTTAATTAAAAAAAGTATCCATTCCATTAAGAATAGCTGCTTTAAGCTAATAAATTTATAAATCATACTTTTCATTTTTAAAATTATTATTTTATTGGGTTCATATCATGCCTAAACTTAAAATACTAAATGTCTAATCACTTAATGAAACTCCTTCTCCTCTCCTCGAAGGAGTAAGCGACTCACACCAAATCGTAGATTTGGGTTCTCT # Right flank : ACCATAGTAAAATAGCCATTCCTTATTTCTAACAATATCATACAGGCATTGATTTTACAAGGTTTTATAGAAAATTTTCCAAGTGATTACGTTTTTTTATAAATACAAAACAAAAAACTATCCTAAGCCTTATATTTCAATGACTAGAATAGGTTTTAAAATTTGTTACGCCTGGAAAAATTCAATTCAAGAAGCTCCTTCTCCTCTTCTTGAAGGAGTAAGCGACTCATGCCAAATCACAGATTTGGGCTCTCTCCTTAAATACATCCTATGTTAAGGTTCAACCATAGTAAAATGACCATTTCTTAATTTAAAGGATAGCATACAACCATTGATTTTACAAGGTTTGAAAGAAAGTCTTCCAAGTGATTTTGTTTTTTTATAAATACAAAATAAAAACCTATCCTAAGCCTTATATACCAATAGCTAGAATAGGTTTTTAAATTTATTGTGGTTGGAAAATTTAATTTATGAAACTACTTCTCCAATTCTCGAAGTAG # Questionable array : NO Score: 5.75 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATACATCTCATGTTATTGTTCAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [3-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 3 2581015-2580724 **** Predicted by CRISPRDetect 2.4 *** >NZ_DF384213.1 Clostridium botulinum B str. Osaka05, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================= ================== 2581014 28 100.0 38 ............................ TAGCTTAACATTTCCCCACAATATTTATCTGTTTCTGC 2580948 28 100.0 38 ............................ AAATTTATAACCATTCTTTTTCTATCTTCACTTAATGC 2580882 28 92.9 39 .............GA............. AGGAAATATGCTAAATTTTCCGATTGTGGATGCTTAAAT 2580815 28 92.9 36 ......T.......A............. TATTGCCAGCTATAAGGTCCTTGTGCTTCTTGTGGT 2580751 28 82.1 0 .....CT...A...............GC | ========== ====== ====== ====== ============================ ======================================= ================== 5 28 93.6 38 TGAACAATAACATAGGATGTATTTAAAT # Left flank : ACATAAGATGTATTTAAATATTATGTATTCATTCTCAGCTATATTATTATTTTCAGTTGAACATTAACATAAGATGTATTTAAATATTATTTTTTCTGTTGAATAATTAATCATTTCTTTTAGTTGAACATTAACATAAGATGTATTTAAATTCAAATAGACTTGGATTAACAACTGTTGCAAGTGCTGTTGAACAATAACATGAGATGTATTTAAGCAGTGAACCCAAATCTCTGATTTGGCGTGAGTCGCTTACTCCTTCGAGAATGGGAGAAGGAGTTTCATTAATGAGTATAGCGTATATATTATATCTAATTAAATTTTCCCAAGTAAATTCAAAATTAAAGCCTATTATAAGCATTGATATATAAGGATTAGAATAGGTTTTTATTATGTATTTATGAAAAATAAGAATCGGTTGGGAAAATTTCTTTAAAACCTTGTGAAATCAATAGTTATATGATACTCTTAGAAATAAGGAATGGCTATTTTACTATGGC # Right flank : AGGGAACCCAAATCTGTGATTTGGCGTGAGTCGTTTACTCCTTTGAGGTAACGAGAATGAGTTTCACTAAGTAAATAGAGAATCCAAGTTTAAAACCTAGCTTAATCATGTAAACCACATGATTAAACTAGGTTTTAAAATATTTATAAATATGAATTAAGGGTTATATCTGTATAACGCATTTATCTGTTTAAATATCACATTCTATGGTAATATAATAGGGTAAGGAGAGTGAAAGTTATATGAAAAAGAGATTTAATGTAACTGGAACCTGTATACCAGAAAAACATTATATGGTAGATATATCAAAAAAGCTAGATAGCATATTAGAATTAGTATATAATGAAGAGTATTTTATTATAAATAGACCAAGACAGTATGGGAAAACTACTACTTTATACTTATTAAATAGATATTTAAGAATATCTAACGAATATATTCCTATAAAAATAAGTTTTGAAGGAATTGGGGACTTAATTTTTGAAGATGAAAAAATATTT # Questionable array : NO Score: 5.66 # Score Detail : 1:0, 2:3, 3:0, 4:0.68, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGAACAATAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:78.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 4 2581657-2581297 **** Predicted by CRISPRDetect 2.4 *** >NZ_DF384213.1 Clostridium botulinum B str. Osaka05, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 2581656 30 100.0 37 .............................. GGAACTAATCCTTGCATAGTTTTACAAATCCAATAAG 2581589 30 100.0 34 .............................. TCCTCAAATCCATCATAACTAGCTTCGTTATTTG 2581525 30 100.0 36 .............................. ATTATGTATTCATTCTCAGCTATATTATTATTTTCA 2581459 30 100.0 37 .............................. ATTATTTTTTCTGTTGAATAATTAATCATTTCTTTTA 2581392 30 100.0 36 .............................. TCAAATAGACTTGGATTAACAACTGTTGCAAGTGCT 2581326 30 86.7 0 ........A......G............GC | ========== ====== ====== ====== ============================== ===================================== ================== 6 30 97.8 36 GTTGAACATTAACATAAGATGTATTTAAAT # Left flank : GGTAAAGAAGAAATGGATTTTCGTATAAAATTATATGATTTTGGAGAATTAGACAAGTTAATATTAAAGGCAGGATTTAAAGGAAGCTATGTATTCAGTGATTTCGAAAGAAACAAACCTATAGACAGAAATAGTGAAACTTTTTTATATGAATGTTATATTTAAAAATAAGGAATGGCTATTTTACTATGATTCAACATTAATATAGGATGTATTTAAGCAGAGAACCTAAATCTGTGATTTGGGGTGAATGGCTTACTCCTTCGAGAAGAGGAGAAGGAGTTTCATTAATGAGCATAAAGTATATCTTATATCTAATTAAATTTTTCCAAGTGAATTTAAAATTCAAACCTATTCTAGTCATTGATATATAAGGATTAGGGTAGGTTTTTGTTATGTCTTTATAAAAAACAAAATCACTTGGAAAATTTTCTTTAAAACCTTGTAAAATCAATGGTTGTATGATAATCTTAAAAATAAGGAATGGCTATTTTACTATA # Right flank : AGTGAACCCAAATCTCTGATTTGGCGTGAGTCGCTTACTCCTTCGAGAATGGGAGAAGGAGTTTCATTAATGAGTATAGCGTATATATTATATCTAATTAAATTTTCCCAAGTAAATTCAAAATTAAAGCCTATTATAAGCATTGATATATAAGGATTAGAATAGGTTTTTATTATGTATTTATGAAAAATAAGAATCGGTTGGGAAAATTTCTTTAAAACCTTGTGAAATCAATAGTTATATGATACTCTTAGAAATAAGGAATGGCTATTTTACTATGGCTGAACAATAACATAGGATGTATTTAAATTAGCTTAACATTTCCCCACAATATTTATCTGTTTCTGCTGAACAATAACATAGGATGTATTTAAATAAATTTATAACCATTCTTTTTCTATCTTCACTTAATGCTGAACAATAACATGAGATGTATTTAAATAGGAAATATGCTAAATTTTCCGATTGTGGATGCTTAAATTGAACATTAACATAAGATG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 5 2585025-2584669 **** Predicted by CRISPRDetect 2.4 *** >NZ_DF384213.1 Clostridium botulinum B str. Osaka05, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 2585024 30 100.0 35 .............................. AAAGTTATTTTAGCTTTTAATCGTATTACATTTTG 2584959 30 100.0 34 .............................. GAAGTATCCATACCGTAATTATTGCAAACTATAT 2584895 30 100.0 35 .............................. AATTACATCTTAATTATAAAATATTTTTTAATATT 2584830 30 100.0 36 .............................. TCTTGTTGCTCTATTCTACTTTTTATTTTTTTATTA 2584764 30 100.0 36 .............................. AGATTATACATAGTTTGTTCTTTTTTATGTTGTTCT 2584698 30 93.3 0 .......................C....G. | ========== ====== ====== ====== ============================== ==================================== ================== 6 30 98.9 35 GTTGAACATTAACATGAGATGTATTTAAAC # Left flank : AAGGAATGGCTATTTTACTATGATTGAACAATAACATAAGATGTATTTAAATGAAGGACAACCAACAAATTGAAACTCTTTAATTTCGCATTGAACAATAACATAAGATGTATTTAAATACTGTTCCATCATCTATACCTTCTCTAAAGCCTTTCATTGAACAATAACATAAGATGTATTTAAATCAAAAACCTAAAGACTTGCATTCTTCTGCAGTAAGTTGAACAATAACATAAGATGTATTTAATCAGGGAAGCCAAATCTCTGATTTACCGTCTTACTCCTTCGAAAAATAGGAGAAGGAATTTTATATCTAATTAAATTTTTCCAGGTGAATTTAATTTTAAAACCTATTCTAGTCATTGAAATATAAGGATTAGAATAGGTTTTTATTACGAACTTTTTTAAAAGCAAAATCACTTGGAAAACTTTCTACAAAACCTTGTAAAATCAATGGGTGTATGATATTCTTAGAAATAAGGAATGGCTATTTTAGTATG # Right flank : AAGAAATGCAATCATCTGATTTAGAATAATCATTTATACATGGCAATAATTTTTTGCTTTATTACTTGTTGAGTTAAATTGTGGGATTTTATTGACTAAAATATTTTTAAAATTTAGTTTTAATTTTGGCTATGCTTTAGAGTGGTGTTGGAATTTTAAACCCCATTAAAAGAAGTTAAATATCTTTTTTTATGGGGTTTATATAAATTGTAAAATACTAACTACTTAAAAATTTTTTCAATGAATCATTATTTTTAAATAAGTTTTTTAAGTTTCCATATTTTTGTTCTAAATTTTTTCTATTATATTTATAGGATTCTTTTCCTATATTGTCTACATTAAATTTAATAATTTCAGCGTTTGGTATAAGAGATAATAGTACCACCGCATTCTTTTCTAAAAGCTTGTTAGCTTTTTTGTCACTCCAAAATTTATTATAATTTTCTTCACCTAAATTTTCATTTGCTTTATAGTTAACAGTTATTTCATAGGGCTCTTTA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 6 2585502-2585276 **** Predicted by CRISPRDetect 2.4 *** >NZ_DF384213.1 Clostridium botulinum B str. Osaka05, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 2585501 29 100.0 38 ............................. GAAGGACAACCAACAAATTGAAACTCTTTAATTTCGCA 2585434 29 100.0 37 ............................. ACTGTTCCATCATCTATACCTTCTCTAAAGCCTTTCA 2585368 29 100.0 35 ............................. CAAAAACCTAAAGACTTGCATTCTTCTGCAGTAAG 2585304 29 93.1 0 ...........................TC | ========== ====== ====== ====== ============================= ====================================== ================== 4 29 98.3 37 TTGAACAATAACATAAGATGTATTTAAAT # Left flank : TTATTCAAGTCATTGATATATAAGGATTAGGATAGGGTTTTGTTATGCCTTTATAAAAAATGGGAATAGGTTAGAAAATTTTATTTAAAACATTGTAAAATCAATGGTTATATGATATTCTTGAAAATAAGGAATGGCTGTTTTGCTATAGTTGAACATTAACATAAGATGTATTTAAATGTATATATAGTAAAGCTATCTTCTTTACAATCAATAGTTGAACAATAACATAAGATGTATTTAAGCAGGGAACCCAAATTTACAATTTGGTGTGAGTCGCTTACTCCTTAGAGGCAACGATAAGGAGTTTCATAAATTTAATTTTTCCAAGTGAATTCAAATTCAAAACCTATTCTAAACATTGATATATAAGGATTAGAATAGGTTTTTATTATGTATTTTTAAAAAAGCAAAATCACTTGGAAAGATTTCTACAAAACCTTGTAAAATCAATAGTTATATGATATTCTTAGAAATAAGGAATGGCTATTTTACTATGA # Right flank : AGGGAAGCCAAATCTCTGATTTACCGTCTTACTCCTTCGAAAAATAGGAGAAGGAATTTTATATCTAATTAAATTTTTCCAGGTGAATTTAATTTTAAAACCTATTCTAGTCATTGAAATATAAGGATTAGAATAGGTTTTTATTACGAACTTTTTTAAAAGCAAAATCACTTGGAAAACTTTCTACAAAACCTTGTAAAATCAATGGGTGTATGATATTCTTAGAAATAAGGAATGGCTATTTTAGTATGGTTGAACATTAACATGAGATGTATTTAAACAAAGTTATTTTAGCTTTTAATCGTATTACATTTTGGTTGAACATTAACATGAGATGTATTTAAACGAAGTATCCATACCGTAATTATTGCAAACTATATGTTGAACATTAACATGAGATGTATTTAAACAATTACATCTTAATTATAAAATATTTTTTAATATTGTTGAACATTAACATGAGATGTATTTAAACTCTTGTTGCTCTATTCTACTTTTTA # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTGAACAATAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:82.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 7 2586530-2586105 **** Predicted by CRISPRDetect 2.4 *** >NZ_DF384213.1 Clostridium botulinum B str. Osaka05, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 2586529 30 100.0 36 .............................. AAAGTTAAGTAGTAGGATGGAAAGATTCCTGGGAGC 2586463 30 100.0 36 .............................. TATTTAAGTTCTGTTCCCCTTAGTGTTATAGTAGTA 2586397 30 96.7 34 ........A..................... TGGTAAATTAGAATGGGGAAGTCCTATTGTACCA 2586333 30 96.7 37 ........A..................... GGCACTAATTTTACACTTTTTAATCCTGCTATATTTA 2586266 30 93.3 36 ......T........G.............. TGTATTTGGTTAATCATTTCCGAGGTTTTTATAAAA 2586200 30 93.3 36 ....G...T..................... TCCGTTCTAACATTTTTATTATCACATTTATGGCCG 2586134 30 86.7 0 ...............G......GC....G. | ========== ====== ====== ====== ============================== ===================================== ================== 7 30 95.2 36 GTTGAACAGTAACATAAGATGTATTTAAAT # Left flank : GATTAGAATAGGTTTTTATTATAAATTTTTAAAAAGCAAAATCACTTGGAAAACTTTTGCGAAATCTTGTAAAATCAATGAGTATATGACATTCTTAGAAATGAGGAATGGCTATTTTACTATGGTTGAACAGTAACATAGGATGTATTTAAATCCTTTATCTGTTTCTTTTTTAAGTTGTAATGGACATGTTGAACAATAACATGAGATGTATTTAAGCAGGGAACGCAAATTTACAATTTGGTGTGAGTCGCTTACTCCTTAGAGGTAACGAGAAGGAGTTTTATTAATGAACATAGTGTATATCTTATATCTAATTAAAGTTTTCCAAGTGAATTAAAAATTAAAATTTATTCTAGTTATTGATATGCGAGGCTTAGGATAGGTTTTTGTTATGTATTTTTGAAAAATCAAAATCACCTGGAAAAATCTTTATGAAACCTTGTAAAATCAATAGGTATATGTTATTCTTGAAAATAAGGAATGGCTATTTTGCTATG # Right flank : AGAGAACCCAAAGTTGCAATTTGGAGTGATTTGTTTACTTATTGTAGGAGAGAAGTAGGAGATTTATTAATTTAATTTTTCCAGGTACAATAAATTTATAAACTTATTCAAGTCATTGATATATAAGGATTAGGATAGGGTTTTGTTATGCCTTTATAAAAAATGGGAATAGGTTAGAAAATTTTATTTAAAACATTGTAAAATCAATGGTTATATGATATTCTTGAAAATAAGGAATGGCTGTTTTGCTATAGTTGAACATTAACATAAGATGTATTTAAATGTATATATAGTAAAGCTATCTTCTTTACAATCAATAGTTGAACAATAACATAAGATGTATTTAAGCAGGGAACCCAAATTTACAATTTGGTGTGAGTCGCTTACTCCTTAGAGGCAACGATAAGGAGTTTCATAAATTTAATTTTTCCAAGTGAATTCAAATTCAAAACCTATTCTAAACATTGATATATAAGGATTAGAATAGGTTTTTATTATGT # Questionable array : NO Score: 5.58 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAGTAACATAAGATGTATTTAAAT # Alternate repeat : GTTGAACAATAACATAAGATGTATTTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 8 2588161-2587733 **** Predicted by CRISPRDetect 2.4 *** >NZ_DF384213.1 Clostridium botulinum B str. Osaka05, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 2588160 30 100.0 36 .............................. TAAGTTAAACCATTTGTAAGTGGCAGTACAACATCT 2588094 30 100.0 37 .............................. GCCTTATCAACTATGCCATTGTTATTTTTGTCATAAA 2588027 30 100.0 36 .............................. TTTAAACACTTTTCACACAATGCTATTTCATTACAA 2587961 30 100.0 36 .............................. ATAATATTAATACTTAGATTATTAACAGCTATTGCC 2587895 30 100.0 36 .............................. TTTATTTCTGCCATATACTGTGATAAACTTAATGGT 2587829 30 100.0 37 .............................. AACTAATAAATATGAAAGGATTATAGCGGATTTAGTT 2587762 30 83.3 0 A..A....T...................GC | ========== ====== ====== ====== ============================== ===================================== ================== 7 30 97.6 36 GTTGAACAATAACATAAGATGTATTTAAAT # Left flank : ATAGGATGTATTTAAATAAATCTACCTCATGTTTTTTATTATTGTGACCTTCTGTTGAACAATAACATAGGATGTATTTAAATCCTTTATATCGTGGTTTCCTGGTTGTATAGCTTTCTAGTTGAACAGTAACATAGGATGTATTTAAATGAAGTTACCACAGAGTTTAGTAATAAAAGAATAGAAAGTTAAACAATAACATGAGATATATTTAAGCATGGAACCCAAACCTTTGATTTATCGTGAGTGGCTTACTCTTTAGAGAATAAGGGAAGAAAGAGTTTCATTAATGAATATAGTTTATATCTTATATCTAATTAAATTTTTCCAAGTGAATTTAAAATTAAAATCTATTCGGGCTATTGAAATGCAAGGCTTAGAATAGATTTTTATTATGTATTTATGAAAAAACAAAATCACTTGGAAAACTTTCTACAAAACCTTGTAAAATCAATGGGTATATGATATTCTTAAAAATAAGGAATGGCTATTTTGCTATG # Right flank : AGAGAACCTAACTTTGCGATTTGGAGTAAGTTGTTTATTTCCTGTAGAGGAGAAGTATGAGTCTCATTAATGAGCATAGTACATATATTCATATCTAATTAAATTTTTCCAAGTGAATTTAAATTTAAAACCTATTCTAGCCATCGATATGTAAGGATTAGGGTAGGTTTTTATTATATATTTATGAAAAATAAGAATCGGTTGGGAAAGTTTCTGTAAAACCTTATAAAATCAATGGGTATATGATATTCTTAGAAATAAGGAATGGTTATTTTACTATGGTTGAACATTAACATGAGATGTATTTAAATTAATTAACTGTTTTAGAAGGTGTGTGTACACTTCTGTTGAACATTAACATGAGATGTATTTAAATTGTCCTAAAGTATCTACTTGTTTTTGTAATTCTATGTTGAACAATAACATAAGATGTATTTAAATTGAAGTGCTCCTCTTAACTTTGTAGCCAATACTATTTGTTGAACAGTAACATAGGATGT # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 9 2588738-2588444 **** Predicted by CRISPRDetect 2.4 *** >NZ_DF384213.1 Clostridium botulinum B str. Osaka05, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 2588737 30 100.0 34 .............................. TTAAAAATTGTTTTAGGCTTAAGCAACCAGTTAT 2588673 30 100.0 36 .............................. AAATCTACCTCATGTTTTTTATTATTGTGACCTTCT 2588607 30 100.0 37 .............................. CCTTTATATCGTGGTTTCCTGGTTGTATAGCTTTCTA 2588540 30 96.7 37 ........G..................... GAAGTTACCACAGAGTTTAGTAATAAAAGAATAGAAA 2588473 30 80.0 0 ...A...........GA...A.......GC | ========== ====== ====== ====== ============================== ===================================== ================== 5 30 95.3 36 GTTGAACAATAACATAGGATGTATTTAAAT # Left flank : TGAAGGATTTGTTTTAAATACAAATGGAGAAGAATCAATTATTAATGCTGATAGTGCTGTTGTAGCTATTGGATATTTATCTGAAAATGATCTGTATAACCAGGTTAGATTTGATATTCCAAATGCAAGACTTATTGGAGATGCTAATAAAGTTCAAAATATTATGTATGCTATTTGGAGTGCATATGAAGTAGCTAAAAATATTTAAATATACCTTTGCAAAAAACTAGAATGGGTTAATATCCATATCTAGTTTTTGCTCTTTACTGAAATTCTATAAGTATATGAGTGTTTGTTATGTACTACTTATGTATATTTAAAGTTTTCCAAGTGAATTCAAATTCAAAGCCTATTCTAAGCATTGATATATAAGGATTAGAATAGGTTTTTATTATGTATTTTTTTAAAAAGCAAAATCACTTGGAAAAATTTCTTTAAAACCTTGTAAAATCAATGGGTATATGATATTCTTGTAAATAAGGAATGGCTATTTTACTATG # Right flank : ATGGAACCCAAACCTTTGATTTATCGTGAGTGGCTTACTCTTTAGAGAATAAGGGAAGAAAGAGTTTCATTAATGAATATAGTTTATATCTTATATCTAATTAAATTTTTCCAAGTGAATTTAAAATTAAAATCTATTCGGGCTATTGAAATGCAAGGCTTAGAATAGATTTTTATTATGTATTTATGAAAAAACAAAATCACTTGGAAAACTTTCTACAAAACCTTGTAAAATCAATGGGTATATGATATTCTTAAAAATAAGGAATGGCTATTTTGCTATGGTTGAACAATAACATAAGATGTATTTAAATTAAGTTAAACCATTTGTAAGTGGCAGTACAACATCTGTTGAACAATAACATAAGATGTATTTAAATGCCTTATCAACTATGCCATTGTTATTTTTGTCATAAAGTTGAACAATAACATAAGATGTATTTAAATTTTAAACACTTTTCACACAATGCTATTTCATTACAAGTTGAACAATAACATAAG # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //