Array 1 694-51 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHWA01000013.1 Mesosutterella multiformis strain KCTC 15688 Contigs13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================== ================== 693 28 100.0 32 ............................ TTGCGATAGCGATACAATCGGGCTTCTTTTCA 633 28 92.9 32 ..........................GC ACCCCCTTCAAGGTGGTGGTCGTAATCATCTG 573 28 100.0 33 ............................ GATTCCGAGGGGGCGATTGCCCTGGTGAATCTG 512 28 100.0 32 ............................ TAATCCCGGGGGTATACAGTCAAGCCCGCAAA 452 28 100.0 33 ............................ GCGGCATAAAACCGGAGGCGAGATCTCAAGCGA 391 28 100.0 35 ............................ TTCGTGGACTACGACCCAGGATTTCGGAGGAGGAG 328 28 100.0 33 ............................ CCGCCAAGGATCAGGCAGACGAAGCAAACGCTG 267 28 92.9 38 .......................C.G.. AAAAGTCGTGGTATGAGCCAAACTTCTCGGAGAGGAAG 201 28 100.0 32 ............................ GCTGCGTCAGCGAGCGAGGGACGCGTGCAGCG 141 28 100.0 35 ............................ CCAATCGATCACCGAAACCCGAGGGGATACAAGGA 78 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ====================================== ================== 11 28 98.7 34 GAAACACCTCTGCGTAGGCAGAGAAAAG # Left flank : TTCACCTGATCAGGAACAGTCTGAAATTCGTCGGATATAAGGATTACAAGGCCGTAGCCGGCGCGCTGAAGCCCATTTACCGGGCCGTAAACGCGGCTGATGCGCGGAAGGAACTGGACGCTTTTGCACAGTCGGAACTGGGGCTCAGATACCCTTACATCGCCAAACAGTGGATCGATTCCTGGGATAAGGTGATCCCCTTCTTTGATTTTTTCCCAAATATCCGCAGACTTATTTATACAACCAATGCCATAGAGAGCCTTAATCGGGATCTAAGAAAAAAGTAATAAGACCCGAGCTGCTTTCCCTACTGAAACGGCTGCTTTGAAACTTCTCTTTCTGGCAATCCGGAAAGTAGAGAAAAGATGGGTGCGGCCTTCTCCATACTGGAGTGCCGCTATGAGAGAATTGGTTGTGCTATTTGGTGACCGAATCACCCCCTACATCGATTAACCTTGAACGAGCCGCCCACAAAAATTACACACCCTCCCAATACGTTG # Right flank : GGTCTGACGCCGCATTAAAGCGCCAAACTCGGAAACACCTCTGCGTAGGCA # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAACACCTCTGCGTAGGCAGAGAAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.00,-9.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [2-2] Score: 0/0.41 # AT richness analysis in flanks prediction: R [36.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.01 Confidence: HIGH] # Array family : NA // Array 2 2785-2078 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHWA01000013.1 Mesosutterella multiformis strain KCTC 15688 Contigs13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================== ================== 2784 28 100.0 32 ............................ TCGGTCTACGGGTTAACGAAAATCGGTTTTAG 2724 28 96.4 33 ............T............... CCCAGACGTCGCTCTGCTCGGATTGTGTCGATG 2663 28 89.3 38 ......T................C.G.. AAAAGGATCGGCTGGAGAAAAAGCTGCTTGATGTCTGG 2597 28 100.0 33 ............................ TAACAACTCGATATAATTTCTATCACTATCACG 2536 28 96.4 33 ........................C... CGAAGTATAAATGCTTGGTTGTACCTTCTAGTG 2475 28 96.4 34 ......T..................... AGCATTTGACGATATTGTAATCATTTTGCTAATG 2413 28 96.4 33 A........................... GAATTGGTGTAATGGTTGACTATATGAAGTGTG 2352 28 100.0 36 ............................ CAGGTACGGCCGTACTGAAGAATCGAAGAAGTGTCG 2288 28 100.0 33 ............................ CACTGTAAAACGTAGGTCAAAACGGTCAACCCA 2227 28 96.4 33 ........A................... ATGACGGCGGAAGCATGAAGCAGCACTATCAGA 2166 28 100.0 33 ............................ CTTCGGTCGGCGTGTCTTGGTCTGTATGGGTGG 2105 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ====================================== ================== 12 28 97.6 34 GAAACACCTCTGCGTAGGCAGAGAAAAG # Left flank : CGCTCCCCGGCTGGGGGCTTCTCGTGATCAAGAGTTCGACGCACTCGGTGCGGAACGCTCTCCAGGCTTCGGAACAGACCCCGGATTCGGAGCTGCGGCTATCGGAGCTTGAGAACCTCATTATTGAGACGCTTGAACCGGCACCGTAGAAATTTCGCGTCTCAACGGTTCTCTGCATAAAGCTCTAGAAACCGTCCGACATTTTCTACCAGCTCCGATAGAACAGTATGTCAAACCCGGTGATCAATAACTTTAATGAACTGAAGAAAGACCTGGTTTTAAAAGACTGTCGTTTTTCTGAGAGGAATGGAAGATTGTTTTAACGACGCGAACTTCGATGGTATTGCAAATCGGAATCCAACCCCTCTTTAAGTTCATTCGAAACAAAGAGGAAGGAAGGTACATTCAAGAAATACAGGAAGCTTTCAGCTGCTATCCCCTCACTGAAATCTTTTATGGCACCTGATAACTCCTCCCGTCCGTTGACATCCGGAGACCAC # Right flank : GCAGATAACTCTTACTTCGACGCCAATACGGAGGGTGAGGAAAATTTTGTGGGTGACTCTGAGATAATTGCTCTTGGAGGAGCCTCAAATGAAACGAAAGACAGACCCCTTGGATAGTGTTGCAGGACAGATTTTAGAAAACGCCAAGAAATCCGGGCTTGAGATTAATACCGCAGAGGATGCGGAAAATCTTATGGCCCATATGCTCGGTCGGCTGCTGACTCAAATGCTTGACGGTGAAATGACCAATCATCTCGGTTACGAAAGAGGCGGTAAACGTGTCACCGAAAATGAGCGTAACGGGCATAGTTCGAAAACCCTCAAATCGTCCAGCCTTGGAAATATCCGTATTGACGTACCCAGAGACCGCAAGGGAGAGTTTGAGCCGAGGGTCGTTCCTAAGCATAAACGCCAGCTGGCGGGGTTTGAGGACAAGGTTCTGGCCTTGTACGCCAGAGGGCTCTCAACCCGGGAAATTCAAGGCTTTCTCTATGATGAAT # Questionable array : NO Score: 3.02 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.88, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAACACCTCTGCGTAGGCAGAGAAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.00,-9.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.74 Confidence: LOW] # Array family : NA // Array 1 226605-225904 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHWA01000001.1 Mesosutterella multiformis strain KCTC 15688 Contigs01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 226604 28 100.0 33 ............................ TCGGTCTACGGGTTAACGAAAATCGGTTTTTAG 226543 28 96.4 33 ............T............... CCCAGACGTCGCTCTGCTCGGATTGTGTCGATG 226482 28 96.4 33 ......T..................... GATCGGCTGGAGAAAAAGCTGCTTGATGTCTGG 226421 28 100.0 33 ............................ TAACAACTCGATATAATTTCTATCACTATCACG 226360 28 96.4 33 ........................C... CGAAGTATAAATGCTTGGTTGTACCTTCTAGTG 226299 28 96.4 34 ......T..................... AGCATTTGACGATATTGTAATCATTTTGCTAATG 226237 28 96.4 33 A........................... GAATTGGTGTAATGGTTGACTATATGAAGTGTG 226176 28 100.0 33 ............................ CAGGTACGGCCGTACTGAAGAATCGAAGTGTCG 226115 28 100.0 33 ............................ CACTGTAAAACGTAGGTCAAAACGGTCAACCCA 226054 28 96.4 33 ........A................... ATGACGGCGGAAGCATGAAGCAGCACTATCAGA 225993 28 100.0 34 ............................ CTTCGGTCGGCGTGTCTTTGGTCTGTATGGGTGG 225931 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 12 28 98.2 33 GAAACACCTCTGCGTAGGCAGAGAAAAG # Left flank : CTCCCCGGCTGGGGGCTTCTCGTGATCAAGAGTTCGACGCACTCGGTGCGGAACGCTCTCCAGGCTTCGGAACAGACCCCGGATTCGGAGCTGCGGCTATCGGAGCTTGAGAACCTCATTATTGAGACGCTTGAACCGGCACCGTAGAAATTTCGCGTCTCAACGGTTCTCTGCATAAAGCTCTAGAAACCCGTCCGACCATTTTCTACCAGCTCCGATAGAACAGTATGTCAAACCCGGTGATCAATAACTTTAATGAACTGAAGAAAGACCTGGTTTTAAAAGACTGTCGTTTTTCTGAGAGGAATGGAAGATTTGTTTTAACGACGCGAACTTCGATGGTATTGCAAATCGGAATCCAACCCCTCTTTAAGTTCATTCGAAACAAGAGGAAGGAAGGTACATTCAAGAAATACAGGAAGCTTTCAGCTGCTATCCCCTCACTGAAATCTTTTATGGCACCTGATAACTCCTCCCGTCCGTTGACATCCGGAGACCAC # Right flank : GCAGATAACTCTTACTTCGACGCCAATACGGAGGGTGAGGAAAATTTTGTGGGTGACTCTGAGATAATTGCTCTTGGAGGAGCCTCAAATGAAACGAAAGACAGACCCCTTGGATAGTGTTGCAGGACAGATTTTAGAAAACGCCAAGAAATCCGGGCTTGAGATTAATACCGCAGAGGATGCGGAAAATCTTATGGCCCATATGCTCGGTCGGCTGCTGACTCAAATGCTTGACGGTGAAATGACCAATCATCTCGGTTACGAAAGAGGCGGTAAACGTGTCACCGAAAATGAGCGTAACGGGCATAGTTCGAAAACCCTCAAATCGTCCAGCCTTGGAAATATCCGTATTGACGTACCCAGAGACCGCAAGGGAGAGTTTGAGCCGAGGGTCGTTCCTAAGCATAAACGCCAGCTGGCGGGGTTTGAGGACAAGGTTCTGGCCTTGTACGCCAGAGGGCTCTCAACCCGGGAAATTCAAGGCTTTCTCTATGATGAAT # Questionable array : NO Score: 3.05 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.88, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAACACCTCTGCGTAGGCAGAGAAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.00,-9.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.74 Confidence: LOW] # Array family : NA // Array 2 263233-266310 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHWA01000001.1 Mesosutterella multiformis strain KCTC 15688 Contigs01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 263233 28 100.0 34 ............................ CCAATCCCGTCTAACTCTCCCAATCCCCCAATCG 263295 28 100.0 33 ............................ AAAAAAAGATCGAGCTCGCACGCTTTTGCGGTG 263356 28 100.0 33 ............................ TCCTTGTAATAATCGGCGGTGAAGTGGACGGAA 263417 28 100.0 33 ............................ CACCGAAAACGATTTTGGCCTGCTCGCGCGTAG 263478 28 100.0 34 ............................ TCTTTGGTGTCTACCCCAAAAGACCAGTCAGCCA 263540 28 100.0 33 ............................ TGCAGCCGAAACCGACACCGCTTCCCGAGACAG 263601 28 100.0 33 ............................ TTCCCGTCGATCTGAACCCGCACGAAGTAGTAA 263662 28 100.0 33 ............................ CTCAAAAGCGACCTGCCTACAAAGCTCTCACAG 263723 28 100.0 33 ............................ GGGCTTGCCCGGACGCTCACATGCAAGAACGAG 263784 28 100.0 34 ............................ TGCAGACGTCACCGTCAATGGCGGCGTTGCGTTA 263846 28 100.0 33 ............................ GTGAGGTCACAGCAACTGCGGCGGCTGAAAAAA 263907 28 100.0 33 ............................ GCGTCAATCTTGGAAAGAGCCTCAAGAGCGGTA 263968 28 100.0 33 ............................ CCTCTTTCGAGTTCGAACTGAAGCAGACCCCTG 264029 28 100.0 33 ............................ ACACCGAGGATGACGCCCTTATCACAGCATATA 264090 28 100.0 32 ............................ TCCTACAGACCGGGAGAATGAAGCGTGAAGGA 264150 28 100.0 34 ............................ TTTGCCCCGCATAACGGCGAAAGCAGTAGCACGA 264212 28 100.0 34 ............................ CACACCAAAGGACTGATCTCTGGGATCTAAGAGA 264274 28 100.0 31 ............................ CTCGAGCGGTCTTTGCCCGATCGAGCAGAAG C [264282] 264334 28 100.0 34 ............................ GGCAGTGAAGAAGGGCGGGAAATGAGTGATGGAA 264396 28 89.3 32 AC.C........................ TTTTCTCTTTCAATCCAGAATTATCAACAACA 264456 28 100.0 34 ............................ CCGGTCACAGTGCATACATCCGGCGCGGTCAAGA 264518 28 92.9 32 ..........................GC GGAAACAAACACAAAACTCGACAGAACAAGCG 264578 28 96.4 32 A........................... TGTGCCGTATACTCTGTGGGGTCCGAATTAAC 264638 28 92.9 33 .G..A....................... CGGTTGCAGATAACGAAGAATCGATTGCTTCTC 264699 28 96.4 33 ..........................G. CGGCGGAGAAGGCCGTTCCAACGGTAATAGCCG CA [264706] 264762 28 100.0 34 ............................ GATCCATTTCGCCAGGGTGCTCACAGAATCTGTA 264824 28 100.0 32 ............................ CAAGCACCCACGCCATGACGAGCTGATCCTGG 264884 28 100.0 33 ............................ AGTCCCCCGGATGGACATGAGACTCGAGCGAAA 264945 28 100.0 32 ............................ GAAAGTTCTGAGCGGATTCCCCGAGTATCTTG 265005 28 92.9 31 ..........................GA GCGGGCCTAAATCAGCCAAACGCTCCTGATA 265064 28 100.0 30 ............................ AGAGTGACGCTGCGGTCTCCCTCTGAGATG 265122 28 100.0 33 ............................ ATCACAGTCCCAGCTCGGTCAATCTCGGGGTCG 265183 28 100.0 33 ............................ CCAAGGAAAAGAACCGCGGCTGATTATGAGCGA 265244 28 100.0 33 ............................ GAGAGGCTTTCCTTCGAGAGAATCCGCTATGCG 265305 28 100.0 33 ............................ ACGGAAAGGACCGCATCAACCTTAATAAGCAGA 265366 28 100.0 33 ............................ GTCCGAACTCTGGTGCGGGAAGCGGATCCGAGA 265427 28 100.0 33 ............................ TTCCGGGGCGGCTTTTTCCATTTCTTCCGCTTG 265488 28 100.0 33 ............................ TCTTCAGAAGTCCGGACGCCTGGTTGTCTGTGA 265549 28 100.0 33 ............................ CACTCCCCTCGGGAAAAACGGAATCGCGGGCTG 265610 28 100.0 33 ............................ CCCTGCGCCTGCGTATTTACCGCCCCGCTGAAG 265671 28 100.0 33 ............................ CTCTGTAGCTTAGTCTACAAATTTAGATTTGTG 265732 28 100.0 33 ............................ CTTCCGGACGGCTACGTCAGAAACCCCCACGTA 265793 28 100.0 34 ............................ TCTCTGCGGAGCATCCGTCAGAATGTCAGGATTG 265855 28 100.0 34 ............................ AGTGGCAAGGCAGAAGACGGAGTCCCGGTTCTGG 265917 28 100.0 33 ............................ TCCCAACGGCTTCAATCAGTACGCACGATGATG 265978 28 100.0 33 ............................ AACTGCGTAAGAAGCGGATTGACCGTGAACTTA 266039 28 100.0 33 ............................ TTGATACCAGCACCGCGGAAAGCGGCGTCACGC 266100 28 100.0 33 ............................ GAGAGAGGAGAGAACAAAATGTGTGAAGCGAAA 266161 28 100.0 33 ............................ TCTTTGGCACCGTTTGAGAGGGCTAAGTTAAAC 266222 28 100.0 33 ............................ GGGTTGTATGCCCTAGCTTTTAACCATTCTCTG 266283 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 51 28 99.2 33 GAAACACCTCTGCGTAGGCAGAGAAAAG # Left flank : AAAGGTCAGATACATGGGATTCTTTTCAATGATCAGCGATCGAAAACTTGAGTCGAAAGAAATCCTGGAGATCTACAGAACGCGCGACTGCATCGAGAAATGCTTTGGGGTTATCAAGACTGATGTTGGTTTTACAACTACAAGGGGACACTCCGACGTTTCTGTTAATGGACGTCTCTTGTTAGCCTTCATCGCTGCCACAATTGTTTCCTGGCTCATCAAAGCCATGAGTGTTGAAGTGAAAATAGGGAAGAAATCCTATGCACCTCTGCTTGACGAATATTCTCTCATGGAGCTGCTGGAAGATGTGGGGCAGATCCGTTTCTATAGCTCATCAACAGGAAAAGTTTGGCTCGGGGAAATTTTAGGTCGCCACAGACTCGTTTTTGAGCGACTCGGACTGGAAAACTGCCTCCTGAATCCCGCTATGTATAAGTAAATCGGGAATTCAGGTAGGCAGAGAAAAGGCGAAGGGGATTCCCGATAGCCGTGTGGTGGAG # Right flank : GCAATTCGCCCCTGCTCCGGGTTGGGTAGGTGAGGGTGTGTAATTTTTTGTGGGCGGCTCGTTCAAGGTTAATCGATGTAGGGGGTGATTCGGTCACCAAATAGCACAACCAATTCTCTCATAGCGGCACTCCAGTATGGAGAAGGCCGCACCCATCTTTTCTCTACTTTCCGGATTGCCAGAAAGAGAAGTTTCAAAGCAGCCGTTTCAGTAGGGAAAGCAGCTCGGGTCTTAATTACTTTTCTTAGATCCCGATTAAGGCTCTCTATGGCATTGGTTGTATAAATAAGTCTGCGGATATTTGGGGAAAAATCAAAGAAGGGGATCACCTTATCCCAGGAATCGATCCACTGTTTGGCGATGTAAGGGTATCTGAGCCCCAGTTCCGACTGTGCAAAAGCGTCCAGTTCCTTCCGCGCATCAGCCGCGTTTACGGCCCGGTAAATGGGCTTCAGCGCGCCGGCTACGGCCTTGTAATCCTTATATCCGACGAATTTCAG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAACACCTCTGCGTAGGCAGAGAAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.60,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [43.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0 Confidence: HIGH] # Array family : NA // Array 1 270356-270506 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHWA01000004.1 Mesosutterella multiformis strain KCTC 15688 Contigs04, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 270356 28 100.0 34 ............................ TCGGTCTACGGGTTAACGAAAATCGGTTTTTTAG 270418 28 96.4 33 ............T............... CCCAGACGTCGCTCTGCTCGGATTGTGTCGATG 270479 28 96.4 0 ......T..................... | ========== ====== ====== ====== ============================ ================================== ================== 3 28 97.6 34 GAAACACCTCTGCGTAGGCAGAGAAAAG # Left flank : GGACTCGCTCCCCGGCTGGGGGCTTCTCGTGATCAAGAGTTCGACGCACTCGGTGCGGAACGCTCTCCGGCTTCGGAACAGACCCCGGATTCGGAGCTGCGGCTATCGGAGCTTGAGAACCTCATTATTGAGACGCTTGACCGGCACCGTAGAATTTCGCGTCTCAACGGTTCTCTGCATAAAGCTCTAGAAACCGTCCGACCATTTTCTACCAGCTCCGATAGAACAGTATGTCAAACCCGGTGATCAATAACTTTAATGAACTGAAGAAAGACCTGGTTTAAAAGACTGTCGTTTTTCTGAGAGGAATGGAAGATTTGTTTTAACGACGCGAACTTCGATGGTATTGCAAATCGGAATCCAACCCCTCTTAAGTTCATTCGAAACAAGAGGAAGGAAGGTACATTCAAGAAATACAGGAAGCTTTCAGCTGCTATCCCCTCACTGAAATCTTTTATGGCACCTGATAACTCCTCCCGTCCGTTGACATCCGGGACCAC # Right flank : GATCGGCTGGAG # Questionable array : NO Score: 2.55 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAACACCTCTGCGTAGGCAGAGAAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.60,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-6.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA // Array 1 767-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHWA01000006.1 Mesosutterella multiformis strain KCTC 15688 Contigs06, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================== ================== 766 28 100.0 34 ............................ CCAATCCCGTCTAACTCTCCCAATCCCCCAATCG 704 28 100.0 33 ............................ AAAAAAAGATCGAGCTCGCACGCTTTTGCGGTG 643 28 100.0 33 ............................ TCCTTGTAATAATCGGCGGTGAAGTGGACGGAA 582 28 100.0 33 ............................ CACCGAAAACGATTTTGGCCTGCTCGCGCGTAG 521 28 100.0 34 ............................ TCTTTGGTGTCTACCCCAAAAGACCAGTCAGCCA 459 28 100.0 33 ............................ TGCAGCCGAAACCGACACCGCTTCCCGAGACAG 398 28 100.0 33 ............................ TTCCCGTCGATCTGAACCCGCACGAAGTAGTAA 337 28 100.0 33 ............................ CTCAAAAGCGACCTGCCTACAAAGCTCTCACAG 276 28 100.0 33 ............................ GGGCTTGCCCGGACGCTCACATGCAAGAACGAG 215 28 100.0 34 ............................ TGCAGACGTCACCGTCAATGGCGGCGTTGCGTTA 153 28 96.4 35 ...........................A GGTGAGGTACACAGCAACTGCGGCGGCTGAAAAAA 90 27 92.9 34 .................A-......... GGCGTTCAATCTTGGAAAGAGCCTCAGAGCGGTG G [79] 28 28 96.4 0 A........................... | ========== ====== ====== ====== ============================ =================================== ================== 13 28 98.9 34 GAAACACCTCTGCGTAGGCAGAGAAAAG # Left flank : AAAGGTCAGATACATGGGATTCTTTTCAATGATCAGCGATCGAAAACTTGAGTCGAAAGAAATCCTGGAGATCTACAGAACGCGCGACTGCATCGAGAAATGCTTTGGGGTTATCAAGACTGATGTTGGTTTTACAACTACAAGGGGACACTCCGACGTTTCTGTTAATGGACGTCTCTTGTTAGCCTTCATCGCTGCCACAATTGTTTCCTGGCTCATCAAAGCCATGAGTGTTGAAGTGAAAATAGGGAAGAAATCCTATGCACCTCTGCTTGACGAATATTCTCTCATGGAGCTGCTGGAAGATGTGGGGCAGATCCGTTTCTATAGCTCATCAACAGGAAAAGTTTGGCTCGGGGAAATTTTAGGTCGCCACAGACTCGTTTTTGAGCGACTCGGACTGGAAAACTGCCTCCTGAATCCCGCTATGTATAAGTAAATCGGGAATTCAGGTAGGCAGAGAAAAGGCGAAGGGGATTCCCGATAGCCGTGTGGTGGAG # Right flank : G # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAACACCTCTGCGTAGGCAGAGAAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.00,-9.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 2 3499-2615 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHWA01000006.1 Mesosutterella multiformis strain KCTC 15688 Contigs06, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 3498 28 100.0 34 ............................ TTGCGGCGTCAACTGGCGCTGAATTCGAGCCTGA 3436 28 100.0 33 ............................ GATGCGGCACTGGCCGTTTCTGAGCTCTTGGCA 3375 28 100.0 34 ............................ CCATGCGGCTGCGAAAATAATCCGCTCGGATTCG 3313 28 100.0 33 ............................ ACGCGGGTTTCAAGCGCACCCGAGAGGTCGAGG 3252 28 100.0 33 ............................ GCGGATAACAACGGCGGTCATTCGGGGAAGGTG 3191 28 100.0 33 ............................ CTTCTAGGTGCCTTTAAACTCGATTAAAGGGCA 3130 28 100.0 32 ............................ CTCTGATGAACCCGGAATGTTTTTGTTGGTTA 3070 28 100.0 34 ............................ CGGCAGGGATTCCCACAGGGATGGTCGGCAGGGA 3008 28 100.0 33 ............................ GGCGGCGGCTATTTCCTTCTGCGTCTTCCCGTA 2947 28 96.4 33 .................T.......... GCCTGCATGCCGTCAATTCAGCCGTGCAGGTAG 2886 28 100.0 33 ............................ GGCGGCGGCTATTTCCTTCTGCGTCTTCCCGTA 2825 28 100.0 33 ............................ GCCTGCATGCCGTCAATTCAGCCGTGCAGGTAG 2764 28 100.0 33 ............................ GCGGCGAAATCCTCGTTCTTCCCGGTGTACTGA 2703 28 100.0 33 ............................ AGAACCTAACAAAACCTAACATTGGTCAGGCAA 2642 28 82.1 0 ....................CCT...TT | ========== ====== ====== ====== ============================ ================================== ================== 15 28 98.6 33 GAAACACCTCTGCGTAGGCAGAGAAAAG # Left flank : TCTGCGTAGGCAGAGAAAAGCCAAGGATCCACTGAAGAGAATTGGAACCTA # Right flank : CCCGCTCTGTTAGCTGTATTTTTTAACAAAAGTCTATTGATTTTCCAAATAGAAAATTTAAAAAAAGGGTTGATTTATAGGTAAAACATACGTATAATATAGACATATATAATCTCTTTTGCAGCCCTTGCGATATGACTGATCACAATCCGATCCTTCCCGAAGATGCGCGTATTGTCCGAATCAAAGACACAGAGTACGTTGCAATCCATAAGTATTGGTGGGATAAAGAAAAAAAGCGGGGCCAACAAAAAAGGCGATATATTGGCAAGCTTGTTGATGGAAAATTTGTTCCGAACGCAGCTTATGCGGCAGAGCTGAAGCTGACCCGTGTCAAAAAGACCACTGATAAGCGTCAGAAATTTGATCATGACAAAACGTTCGGAACAACCGCACTCCTTACTCAAGCAGCAGAAACCTCGGGTTTAACTGATGATTTGAAGAAAGTTTATGGTGAGGGGAAGGCCGCCATGATGGTAAGCCTGGCGGCATATCAAATC # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAACACCTCTGCGTAGGCAGAGAAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.00,-9.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,1.15 Confidence: MEDIUM] # Array family : NA //