Array 1 89272-88450 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AIHJ01000035.1 Escherichia coli DEC13E gecDEC13E.contig.34_1, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     89271	    29	 100.0	    32	.............................	CGATCCGGGCGTGCCGTTTGTTGCTCGCGGTA	
     89210	    29	 100.0	    32	.............................	CAGATCGTTAAGGCAAAAACGCCCCAACGAAT	
     89149	    29	 100.0	    32	.............................	GCGCGCGACTACTGCCCGACCCGCCGACAACA	
     89088	    29	  96.6	    32	............................C	GACTTTGCCCGGATAAGCAATGGCGATACGTC	
     89027	    29	 100.0	    32	.............................	CTCCGACTTACCGTAGTGATGGCGCGCTGCCA	
     88966	    29	 100.0	    32	.............................	AATTTCTGGAAAAAAACAAATTCAAAAAATTG	
     88905	    29	 100.0	    32	.............................	TGACTGCGGTTCAAAATCTCCGGCACACGTCC	
     88844	    29	 100.0	    32	.............................	GCCGCGCCGCACTGGCGCTGGCACGGTATGCA	
     88783	    29	 100.0	    32	.............................	GAAGTCATGAAGACTTCGACTATTTCTTGATA	
     88722	    29	 100.0	    32	.............................	TAAACACAAGAAAAGGGCGGCACGGAGCCGCC	
     88661	    29	 100.0	    32	.............................	GATTTTTCGCGAACTATCCCGGCGTAATGCGG	
     88600	    29	 100.0	    32	.............................	AAAATTCCATTTTATTACTGTCGGCAATTTCG	
     88539	    29	 100.0	    32	.............................	GCATATTTCATGCAGCGTTCTGAATGAGTAAG	
     88478	    29	 100.0	     0	.............................	|                               	
==========	======	======	======	=============================	================================	==================
        14	    29	  99.8	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   GTCCTTGCCGCAGGTGAAATTGAACCGCCACAACCTGCGCCGGATATGTTACCGCCAGCCATCCCCGAACCTGAAACGTTGGGCGATAGCGGTCATCGAGGACGCGGCTGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCGCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTGGAAGTGCGTGCCGGTGTGTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATTACCCAACTGGCTGGTTGCGGAAATGTGGTGATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGAGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTATCCGTTCTTTAAAAATAAGGAAATGTTTTAATTTAGTTGGTAGATTGTTGATGCGGAATAAATTTGTTTAAAAACAGTTATGTATGCTTAGT
# Right flank :  GGCGCACTGGATGCGATGATGGATATCACTTAGAATTCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAGCGGTAGCATTATCCGCATAACATCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCCGGGAAGGCAGGTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCAGTGCCTTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCTATTCCGTGACTGCGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACAA

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.00,-13.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.41,5.51   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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