Array 1 4039507-4039359 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGSHX010000006.1 Streptomyces asiaticus strain DSM 41761 DSM_41761_DNA2_1_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ======================================= ================== 4039506 24 95.8 37 ...................G.... GCATCCTCGAAATCCGCGAGCGGCCCATGGACCCACC 4039445 24 100.0 39 ........................ TCCGCAAGCTCAATTCTTCCTTGCCCAAGACCACCACCG 4039382 24 95.8 0 ..C..................... | ========== ====== ====== ====== ======================== ======================================= ================== 3 24 97.2 38 GATCGCCTCGCGCGCGGGTACGAC # Left flank : ATGCCCTTGACGCCCTGGCTGCTCTTGCCGAGCTCGGCGACCGTGATCGTGACCTTCTTCTCGAGCGTGGTCTGGCCGGTCTGCGGGTTCTGCCGGGCGAAGAGCGTATCGCTGTCGAAGCTGCGGTACGTCTCCTTGCTCGCCTCGGCCATGACCGGGTTGTTGGCGATCAGGCCCCAGCTGGACTTGGCGATCTCGGGGTCCACCCCGATCCGTACCTTGTCCCCGGAGGTCACCTTGATCGTCTTCTCGGGCTTGGCGGACAGGCAGTCCTTGAACTTCTTCGAGCTCAGGTCCTTGCCGTCGCCGTAGCAGCCGTTGCTCGCCTCGGTCGTCACGGTGTTCGAACCGACCGTCACCGTTGCCAGCGGGGTCGGCTTGTCGCAGGCGGAGAGGGCGACGAGCCCGAGGGACACGGCACAGGCGGCGGTGACGGCGCGGCGGCCCTTGCCCCTGGAAAACAGCGCAGCGGTCATGCGGGCAGGCTATCTGGCCGCACC # Right flank : TCGCCGTTGGCGGTCCCGCCGGGCTCGGATGCGGCCCGGGACTCACGCCACCCGCGGATACGGCGCCCCCTGCCGGGAGGCGCTCAGCAGTCCGCGGACGCTCAGCGCCGCGCCCAGCGCGATCACCGCCGCGGCGACCGCCATCCCCAGCACCCCGTGGAGCGGCAGCACGATGCCGATGGCGCCGCCGACGACCCACGCCATCTGGAGCGTCGTCTCGGACCGCGAGAACGCCGAGGTGCGGACCTCCTCCGGGACGTCCCGCTGGATCAACGCGTCCAGCGACAGCTTGCCCAGCGCCTGGGAGATCCCGGCGGTGGCGGCCACGGCGGCCACCGTCACCGAGCCGTAGAGGGCCGCCGACACGATGAGCACGCCCAGGGCGGAGCTCAGCACCACCGCGATGATCAGCTCCGGGCCGCGCGCCCGCAGCCAGGCGCCGATCGCGGTGCCCAGCGCGTTGCCGCCGCCCGCGCAGACCGCGGCCAGGCCGAGCGAGA # Questionable array : NO Score: 2.53 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATCGCCTCGCGCGCGGGTACGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.80,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [23.3-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 7351903-7352114 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGSHX010000006.1 Streptomyces asiaticus strain DSM 41761 DSM_41761_DNA2_1_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 7351903 29 100.0 32 ............................. AAGGGCGCCGCCGAGTTCGCCACGCGCGCACG 7351964 29 93.1 32 .G...............A........... GATATGGCTCCGTCCTCCGCGTTCTCTGGTGC 7352025 29 100.0 32 ............................. GAGGTGGAGATGGGGCACGCCGTGGTGAGCCT 7352086 28 86.2 0 .....................C.T.-..T | C [7352107] ========== ====== ====== ====== ============================= ================================ ================== 4 29 94.8 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : CGGACCGTTCCGCCGAGCGTGATCCCTCGCCCGAGACAGACCCTTCCACCACTTTCTCGCCCGAGGAGCTGCGCGGGGAAGACTCCGAATATGAGAACGTGACGGATGAGGACGTGTCCGATACCCCAACGGGGGGCGGAGGGTCCGACGCAGCCTATGAGGAGATGCGCGTCCGATTCATCTCAGGCGCTTCGTCCGGTCCGGCAATGTTCTCACTTGATTTCTTGGCCGGGGTGTTGCAGGTGACCGTAAACAGCCAGCATCCTCTGGGGTCGTCGATAGCTCGGGTAATGGAGCGCGGCGACGATGAGGCTTCCCGGCTCGTGAAACTCATGCTCATTTCGTGGGCACGCATGGAAGATGAAATCCCTAACGCGCGGATGCGGGCCCGAGTAGCGGATATCCGAAATGACTGGGGCCGCTATGCGCGGTGGCTGGAAGAGCCCGAAGGGTAGCACGATTGCCGGATTCCCCTCTCTCTCAAGGAGGCGAGCACGGAG # Right flank : TTGTTTGGGCAGGTATAAGGCATCTTGTAGTTCCCCATGTGCTCCGCAAGCTGCGCTGATCTCCGGGACGAGCGCACGTGATGGAGGGGTGAATCATGGCTCGAGCGCAAGCTGAACTTGACCGCAGTGGGGCTCGCAGGAGGTAGGGGCTTTCAAGGGGCAGTGTGGTGGTGCCCTCTGGTGTGCACCGCCGGTCGATAGTGCGGTTTCTGTCCGAAAGCGAATGCTTCGTCGGAACCCTTCCTGTACTTATCAGACATGGCATTTGGGGGCGAGTTGAGTCCGGGATTGAACGATCGGCTCAGTGGGCCAGCGCGGACGGTGTGGGCCAAGCATGACCGGGACGGTCACGGCTGGCTCCCGTTGTGGCGGCACATGGAGGACAGTGCCGCGGTGGCGGGGCGGTTGTGGGATGAGTGGCTGCCGGGCAACGTACGGGCCCTGATTTCGAGGGCGCTGCCGGGTGGGCTTGATGATGGGCGCCGTCTGGCGGTCTGGCT # Questionable array : NO Score: 5.60 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 7361848-7362423 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGSHX010000006.1 Streptomyces asiaticus strain DSM 41761 DSM_41761_DNA2_1_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 7361848 29 96.6 32 ............................G TCAGCGCAAGCTATCCGGACAACTGCGGAGCG 7361909 29 100.0 32 ............................. GCCCGTGGCGAAACCATCGCCACCGTCGTGAT 7361970 29 100.0 32 ............................. GGTCGAGGCCATCCGCGTGGGGGTCCGCTGGG 7362031 29 96.6 32 .............T............... TCCCGGGGCGGCCGGATCGCCTGCCAGCACAC 7362092 29 96.6 32 .............T............... TCACCGAACCGCAGCGCCTTGCCGCCCTCCTG 7362153 29 100.0 32 ............................. CACCTGGGATCGTTCCACACCGCGCAGGCGGT 7362214 29 100.0 32 ............................. GCGGCCGTGGCGCTGGCCCACAACTACGGGCT 7362275 29 96.6 32 ...........G................. GGTCTGACGACGGCGCTGGACACCGAAACCAC 7362336 28 89.7 31 ...........G.....-A.......... TGGGTGGAGTGGGTGGTTGCGTGGTCCAGGC 7362395 29 79.3 0 A.T..........TT.T........C... | ========== ====== ====== ====== ============================= ================================ ================== 10 29 95.5 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : GGTGCAGGCTGGCCGCAACTATGCCGAAAGCGACGGCCCGCACAGCGACGAGGTCTTCTGGTGACCGTCATCGTCTTGACCAACTGCCCGTCCGGCCTTCGCGGCTTCCTTACCCGCTGGCTCCTGGAAATCTCCGCCGGGGTCTTCATTGGCAACCCCTCGGCCCGCGTCCGCGACGCCCTGTGGGATGAAGTTCGCCAATACGCGGGCCAAGGCCGCTCCCTGCTCGCCCACACCACCAACAACGAGCAAGGCTTCACCTTCCGCACTCACGACCACGCTTGGCACCCCATCGATCATGAGGGTCTGACGCTCATCCGACGCCCCCACTCCAAAGCACAGCAGACCACCGGCGTGCCGAAGCCAGGCTGGAGCAAGGCATCCAAGCACCGCCGCTTCGGTAGGCGGGCCCGATAATGAGCCAAATCACCGAATTGCCGGAACCGGCGAAAGTGTGGGAAACGGGCCTCTGCCCACGCTGAACCCGCAGGTCACGCAGT # Right flank : CCGGCGGTCGTGAGCGAGGCGTCGTCGGGAAGCTGTTCCCCGCGCAAGGGATGGTTCCAGCTTTAAGGCGCAATAACTGGGGGCGGTCAGTCGCCGCACACACGGGGATGAGCGCTGCCGTTCGGCAGAAAGCAAGAAGTGGGGCGATCAGCCTGTCTGTAGCTCAGGAGGAGAGCTCACGTCCGTCGTTCAGTGACTAGAATACGGATGCTTTGGGAACGGGCTTGGTTATGACTTCGCAACTCGCAGAGTGGGCCTGGAAGACAGCGAAGGCAGAACTGGCGTCAACTTTGCCACGCCGCTGGGCGCACTCGCTAGGCGTAGCCGCAAGGGCCGTGGAACTGGCTCCTTTGCTTGGCGACTCGGCAGAGTTCCTGCGCGCGGCGGCTGTTCTGCATGACATTGGGTATTCGCCTGGGCTCGTGGCAACCGGGTTTCATCCGCTTGACGGTGCCCGGTTTCTCCGTGACGTGCATGGTGCTGATGGGCGGCTGGTGCGG # Questionable array : NO Score: 5.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : CTGCTCCCCGCACTCGCGGGGATGGTCCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 7418715-7419716 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGSHX010000006.1 Streptomyces asiaticus strain DSM 41761 DSM_41761_DNA2_1_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 7418715 29 96.6 32 ..............T.............. ACCCCGCCGAGCGAGGCGGCCGCCAGCACGTA 7418776 29 100.0 32 ............................. ATGCCCCGGTATGAAGAGGTCGCCAACGACCT 7418837 29 100.0 32 ............................. AGCGAGCCGAGCGGCGACCTCATCGTGCCCTC 7418898 29 100.0 32 ............................. CAGGCATGGGAAGTCGCCTCCATCCAGGACGG 7418959 29 100.0 32 ............................. AGCAGTACACCCAAAAGGTGCGATGACCAGGG 7419020 29 100.0 32 ............................. GCGTCCCACAGGTCCGTGGTCCGGCCGCCGTG 7419081 29 100.0 32 ............................. CACCCCGACGTCGACCCCCGCGACATCCCGTA 7419142 29 100.0 32 ............................. CCCTGCTCCATGCGGCGCTGCACCTCGCCCAG 7419203 29 100.0 32 ............................. ACCCTCATCGCCAAACTGTGGGACGACAACAA 7419264 29 100.0 32 ............................. TGCTGAAGGCAGACGTGTACGCGCCGGATCCG 7419325 29 100.0 32 ............................. ACTCGGCGAGTGGTCACGGTGTCCGACGCGTT 7419386 29 100.0 32 ............................. GGCACCAAGCCGAGGAGGTAGCCGGTGCCGGC 7419447 29 100.0 32 ............................. GCGGGGCCGATCGCGTTCCGCCACAGCCCGGT 7419508 29 100.0 32 ............................. TCGCCGGCCAGTTCCTTCAGGCCGCGGCTGAT 7419569 29 100.0 31 ............................. TGAGCGGCCGACCTCGCCCACCAGGCCACCT 7419629 29 96.6 32 .........................C... GCCATGCTGGTATGGATCGAGGAAGCGGCCGA 7419690 27 82.8 0 ..........--.G.............TA | ========== ====== ====== ====== ============================= ================================ ================== 17 29 98.6 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : ACCGGAGATCGTCCTGCTGGCACGGGTGGAGCTGTCGACAAGCAGCGTCGCTAGGGGCTGTGCTCGTGGACGGTTCAAACCCTTTACTACTCCAAGGATTTGGCCCTCTTGGTGCGGCTGATGTTGCCGGGGTCTGTAGCTCTGTTCACACGCCTGAGCGTCGTAGTGCGAGGGGTGTGGAATGTGCTTGTCTCGGCGTCGTGGCTGAGGTTCGTGAGGTAGTTGTTGGGCAGGGTTCGGTTGGTTTCTGTGTGACGTGGGCGCGCACCTGGCGGGTGCTGTGGACTCTTGAGGACTGACTGTGCCAATAACGGTCGTAGGAAGGCTGTGTTGATCGGGAAGGGGTTGGTGGCCATGGTGGCCGAGGTGTGGGCTTTGGGGAAGGGCGGGTCGACCACGCAACCATGGTCCGGATCTCAGAAGAGATGGACGCTTATGTTCGGGATGCCGGAAATCGAGAAAGTGCTCTGCACACTACCTGCTGGCAGATAGAAGGCAGC # Right flank : ACACCTCACAGCAGATCGGTGGCGCCATCCGTACGCCTTGCTGACGCGATGGTGGCGAGCGTCACCACCCCCGTCAGTATCGTCGCTAGCTTCCGCGAGGTCTGATCCGAGTCCGAGCTCTTCACCCTGCCCGAGATCAGCGCCGTGATCTCGCACTGGTACGTCGTAATGATATGAGGCCGCGTTCTCCAGTCTGCTGTCCACCTTCGCACGCAGTGCCGGGTCGGTCGTCAGGTGCAGCCGGACGGTCCGAGATTCGATTCGACAGGTTCTTGACTACTGCTCCTTGTGCCCCGCTTGCTGGGCACGACTCACAAGGTCCGCGTGATGTTTGGGCCACTCCGCCAGCGGCGTGAGAGCTGTCAGCAGCTCGTCGGCAGCTGACGTCAATTGGTAGCGGGCACGGTAGGGAAATGTGGGCTCGCGGTGGCGTTCAATGAGTTCCTCCCGCTCCAGGCGCCTCAGGGTTCGGTTCAATACACTTTCTTGAAGGTAGAGGT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //