Array 1 132575-132869 **** Predicted by CRISPRDetect 2.4 *** >NZ_KL205536.1 Prevotella loescheii DSM 19665 = JCM 12249 = ATCC 15930 Scaffold582, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 132575 32 100.0 33 ................................ TACAACGAATAAATCTTATTATAAGCAGCGATG 132640 32 100.0 34 ................................ TACAACTTTACGAGTATGAGCGGAATATCACCCG 132706 32 100.0 34 ................................ TACAACTTACATCCTTAATTTCTCTTGCAATAAC 132772 32 96.9 34 .T.............................. TACAACTCACATGCAGCGTGACGATGGCTGAGCG 132838 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ================================== ================== 5 32 99.4 34 CGGTTGTGGTTTGATGTAGAATGAAGATATAA # Left flank : GATGGCTTCACCATGTATCAATTTAGCGTGTACGTACGCTATTGTGGTTCATACGAGAGCATGAACGTACACATCAAACGGGTTAAATCGCTTGCTCCCACCAAAGGTATGATAAGCATCTTGGCCGTAACCGATAAACAATATTCCAGCATTATCAACGTATGGGGAGAAATTGCAGCAAAACAACACCCAAAGCCCATTCAACTAGAGTTTTTTTAGTAACTTTGTATTAAATAAGCCTCATCAAACAACTTCATATCGCCCAATATGGTTTTCAAACAGTTGAATATCAGTAATGTAAGTGGTATATGTTGTGGTTTGATGTAGAATGAAGATATAATACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGATGTAGAATGAAGATATAATACAACTACGCGTCACCGAACTTGCACGCATCCA # Right flank : ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTTTGATGTAGAATGAAGATATAATACAACAAAAGACGGGTTTCAGGGAAAGCATTGTCGGTTGTGGTTTGATGTAGAATGAAGATATAATACAACTGGTCTTATAATATTTGTTGTCGGCTTCTTTTTGTGGTTTGATGTAGAATGAAGATATAATACAACGCACGTTGGGGTTGTTCTTGTTGTAGGGCAGTTGTGGTTTGATGTAGAATGAAGATATATTACAACAGAAAAAGGCCATCGTAGCTGGACTTGACAGTTGTGGTTTGATGTAGAATGAAGATATAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATATCTTC # Questionable array : NO Score: 3.03 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGGTTGTGGTTTGATGTAGAATGAAGATATAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.62%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 2 133683-133904 **** Predicted by CRISPRDetect 2.4 *** >NZ_KL205536.1 Prevotella loescheii DSM 19665 = JCM 12249 = ATCC 15930 Scaffold582, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ========================================= ================== 133683 25 100.0 41 ......................... ACAACTGTTGGTGAGCCAATCATAGAGGTTGCACAGTTGTG 133749 25 100.0 40 ......................... ACAATGGTGAGGTCCATCTTGCCGAAGGGCGAGTGTTGTG 133814 25 100.0 41 ......................... ACAACTTCGCAGAACTTCTACTCGGCGCGCAATAAGTTGTG 133880 25 100.0 0 ......................... | ========== ====== ====== ====== ========================= ========================================= ================== 4 25 100.0 41 GTTTGATGTAGAATGAAGATATAAT # Left flank : GAAGATATATTACAACAGAAAAAGGCCATCGTAGCTGGACTTGACAGTTGTGGTTTGATGTAGAATGAAGATATAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATATCTTCATTCTACATCAAACCACAACAGGATTGCTGCTTATAATAAGATATATAATGTTGTATTATATCTTCATTCTACATCAAACCACAACTGACAAGTTTTTTGCTAATTCATTTTATGAGTTGTATTATATCTTCATTCTACATCAAACCACAACCCCTTGTTCTATATTACGAAAACTGACACGGTTGTATTATATCTTCATTCTACATCAAACCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGTTTGATGTAGAATGAAGATATAATACAACCGGCCTTATCCGTCATGTGAACGTGCAGCGGTTGTGGTTTGATGTAGAATGAAGATATAATACAACAAAGCACTGGAATAACCAACCTAGCAAATGTCCATTACTAAAACCCGAGAGGTTTTCAGCCTACAAAATGTCCATTACGCCATATGATACAACTACTGCACTTTCTATCTCAATAGTACTTGGGACAAACAACTTACGTTGTTCTGAATTCATCGAGCTCACATTAATTATGGTGTGTCCTTTTACGCCTTCTGTTTGTTGTAAGGATAGGCGCGTAGGGAAAAGTGATTGGGGATGGACAATAACGAAAAGGGGATGGCAGAAGCTAATCTGCCATCCCCTTTTGGGTTTTGCCACTTGG # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGATGTAGAATGAAGATATAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //