Array 1 68691-71502 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZDH01000012.1 Weizmannia coagulans strain Unique IS-2 contig_12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 68691 32 100.0 34 ................................ CGCCGACAAATACAAATGAATTTCACTCGTCAAC 68757 32 100.0 33 ................................ ATCAAGCGGAAAGCACGTTGGCAAATGGGCGGT 68822 32 100.0 33 ................................ TGGAACAGTTAACGTCAGACAATTTACAGGGCT 68887 32 100.0 34 ................................ CCAAACGATCAGGGATAAAGTATGGGATGAGTGG 68953 32 100.0 36 ................................ ATCTAATTCAACTAATGAACCGTCATCGTATCTGCT 69021 32 100.0 34 ................................ TTCCCGCTGCTGGTTGATCAGCTTTTTCTGTTCT 69087 32 100.0 35 ................................ AGACGACAAATACGACTTACTTTGGTACAAGTTAT 69154 32 100.0 35 ................................ TACATCTGGCACATACACGTTAAAGCTGGACGAGC 69221 32 100.0 34 ................................ CGGGTCAAAATCCAAAAGGTTTAAAGCATCGCTA 69287 32 100.0 36 ................................ TTCTAGCGTTATAACCGGGCGGTCTGGCATTTTGCC 69355 32 100.0 33 ................................ CGCGCTATGCTACTGGAATAGGGACATTGCCAC 69420 32 100.0 35 ................................ CTAAACCGTGACAAGCAAAATCCGAAACACGACAA 69487 32 100.0 34 ................................ CCAAGCTCGATATAATAATCAGCAAAAGCCTGCT 69553 32 100.0 34 ................................ GTAGACAATGCGTTGTAATTCCGAGTCAAAAAGT 69619 32 100.0 34 ................................ GAACTTAACGACGGAATCGAACTCGACAGCGACG 69685 32 100.0 33 ................................ GCACCATGCTCATCGGGCAAAGGAAAACATCCT 69750 32 100.0 34 ................................ GTTGCAGAACAAGGCTTTGATGGCATCGATTATA 69816 32 100.0 34 ................................ CCGTCATCAATTTTGCACCGGATTGTGCATCCTG 69882 32 100.0 34 ................................ AGGCAGATCACCCGGATCTTTTGGACCGGGAAAT 69948 32 100.0 33 ................................ AGTTAAAAATTGTCGGTTTTTGCCGTCCGTATC 70013 32 100.0 34 ................................ TATGCGCAGCTGGCCTGTCTCTACCGCCTGCATT 70079 32 100.0 35 ................................ ATCAAGCCACTCAGGCGGGTTCACATGCGCGGCAC 70146 32 100.0 36 ................................ GCCACTACCACCACATTCCGGGTCAATGAATGGGTC 70214 32 100.0 33 ................................ TGATCAATGGTGCTCACTCTATAAAATCACTCG 70279 32 100.0 34 ................................ GGGTCGCTACAGCTAAAAGTAAGTGTGCATTTCG 70345 32 100.0 35 ................................ TTGGATATCGTATTTTGCGATGTATGCGGCCACCG 70412 32 100.0 33 ................................ GCCTTTGCTTGCAGGTCCTGGACAATTTCCGGC 70477 32 100.0 33 ................................ TGATCAATGGTGCTCACTCTATAAAATCACTCG 70542 32 100.0 35 ................................ ACGTTGCAGCCAGTCGCCGATTGCGGTCCCCTGCG 70609 32 100.0 35 ................................ ATCAAGCCACTCAGGCGGGTTCACATGCGCGGCAC 70676 32 100.0 34 ................................ TTTCTTTGCCATTTTTTCATTCCTCCTTGTTGTT 70742 32 100.0 36 ................................ GCCACTACCACCACATTCCGGGTCAATGAATGGGTC 70810 32 100.0 33 ................................ TGATCAATGGTGCTCACTCTATAAAATCACTCG 70875 32 100.0 36 ................................ GCCAGTACATCGGTCACGTCGGTTATGACGTCTATC 70943 32 100.0 34 ................................ AAGACGCCTACCAGTTAATTGCGGTCGATACGGA 71009 32 100.0 33 ................................ CTGTTTGAATGCACGGGACTGACTGAATACTGG 71074 32 100.0 33 ................................ CGGTGCATCCTTGAGTGCTTCAATATGGTGCAC 71139 32 100.0 34 ................................ TGCCGGAGGACCTGGATACAGCTATCCAGCATTA 71205 32 100.0 34 ................................ TGCAATGGCAGGGAGCCTTAATCTTTCCCACTTT 71271 32 100.0 34 ................................ CATTCCTCCATGCTCCACCCCGTCCACGCTTGTA 71337 32 100.0 35 ................................ CTTTAAATACGCGGAAACATCCCCATAGTTTGCAG 71404 32 100.0 35 ................................ CTCCTCCAATATGTATAGATCGTCAACCTTCACCC 71471 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 43 32 100.0 34 GTCGCTCCCTACATGGGGGCGTGGATTGAAAT # Left flank : AGATGAGTATCCTCCTTTTCTGTGGAAGTAGGTGGAAAATTTTGCTTGTTGTCATTACTTATGATGTGAGTACTTTGACCGGAGCAGGGCAGAAGAGGTTAAGAAAAGTAGCGAAAGTTTGTCAAAACTATGGCCAGCGTGTCCAGAATTCCGTTTTTGAGTGTTTCGTTGATGCAACACAATTTGCCTCTTTGAAGATTGAACTGTCTAATATTATTGACCCAGATGAAGATAGCCTGAGATTTTATCAGTTGGGAAACAACTATAAAAATAAAGTAATGCATATCGGGGCAAAACCATCTTTGGATTTAGAAGACCCCTTGATCTTTTAGTGCGAAGGTGTAGTGCACACGATTTTCCCGTGTGTTCGCACCAATATGCTAACCAATATTTTACATATATTGGTTAAATGTGGAAAAATAGTCCTTTGTTTATCAGAGGAAATGGCGAAATTTGGTTGTTTTAAAAACGTACATTCGCCTTTTTGACCAAATTCCGCT # Right flank : TCGTTTGCTGTATTTGCGATCCCTAGGATCATCAAGTCGCTCCCTAATGAATACTTGCTGAGCAAACCAGACAAAGCCTTGTATCTGGTTCGCTCAGCCGCAAATCTGGTTGATGCCGCCTTCTTTGTTCCTTCCATCAACCTTAGACCCGAAAAGTGGCGCTGAACGCGCAGATACCAGTGACAAACCCTTTTTGTAAAGTAACTCTTGTTTTTATAGTTCCTGGAACCGGGACCAGGGCTTTCCTTATTCAGCAGCCCCCGATTATGTATTTCTGTCATCCTCGTCGTCCAGTTCCCTGATCAAATTCCAAGTCTGATAAATCCGGTTTGCCATTTTCTCAGGATCTTTCAGCATCATTTGGTATAAATCCGGCTCATGGCTCAACGTTTCAAGCAGTTTCTTTTCCGGATTACTGACCGCTTCATTTGTCTTCAGGCCGGCATGGTTGGTAAGGCCCAAAAGATAATCAATTGAAACTTTCAACACTTGCGAAATTC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTACATGGGGGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.00,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //