Array 1 42146-45626 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWQY01000019.1 Marispirochaeta aestuarii strain JC444 Contig19, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 42146 32 100.0 34 ................................ ATGAGCTCCGGGACAAATTCCACGAAACCCGCAA 42212 32 100.0 35 ................................ TTTCTTATTCGTATAAGGCAATCCAGCATTTCCGG 42279 32 100.0 35 ................................ ATATCCCATATCATATTCTGTTTTGGGATATATGT 42346 32 100.0 34 ................................ TATTTGGTTTGATATCTTTTCGTACTCCTCAATC 42412 32 100.0 34 ................................ TCTGCACCATCCCACTTGAATACCCATTCGCTGT 42478 32 100.0 34 ................................ AGGATCAATCCGCATAGCCTGCCATGACCTCGGA 42544 32 100.0 35 ................................ TATACAGCGCCGTCAGCTACTTTTCCCGCGCTGTG 42611 32 100.0 34 ................................ CATTGATTAGCTCCTTGTATCGCTTGCGTAAGGT 42677 32 100.0 34 ................................ CGACCTTATGTCGATGGAATCCATCTATAACCTG 42743 32 100.0 35 ................................ AAAACATCTTAGACAGGATAGCACCGCTGACACAC 42810 32 100.0 34 ................................ GATAAAACTGATTTATCTTTGCTCCTGTCCATTG 42876 32 100.0 35 ................................ CTGCCTATCTCCTGCGCCTGTGTGCCGTATATCGG 42943 32 100.0 35 ................................ TTTCTTGTTTTTGATCGGCCAGTACTTGAGAATTG 43010 32 100.0 35 ................................ ATCAGTCTCCCCCGGGACACGGGGGAGGGTCAGGG 43077 32 100.0 34 ................................ GGATGATACTCCAGCGAGACTCCAGGTTGTTACC 43143 32 100.0 35 ................................ ATCTATCACACACCTGAGTGGGGGTGTTAACTCCG 43210 32 100.0 35 ................................ TTGACTCAAGTTCATTAACTGACTCTTGAGTTCCG 43277 32 100.0 34 ................................ ATGATGCTGGCAAAATCAGACATACTAAGAATAG 43343 32 100.0 34 ................................ TCAGGACCGCACACGCTGTCAAGACGGTCCTGAA 43409 32 100.0 34 ................................ TTGATAATCGGTGTTTGTTATACTGCGGAATTCT 43475 32 100.0 34 ................................ TGTCTGTGTCAAACTGGCGAGGAGATAGGAGGCA 43541 32 100.0 34 ................................ CGATATTGTTGAGCAGGGGCTTGTCTGGTTCCTT 43607 32 100.0 34 ................................ TTGAAAGGGCTGGGAGGATTTACGGCTAATCACT 43673 32 100.0 35 ................................ AGATATATAAAGTCCGATTTTCTCCTTGTCTGTTT 43740 32 100.0 34 ................................ CTTGAGTGTACGGGGTATTGCCCCGGGGGGAATG 43806 32 100.0 34 ................................ CAAAAATCTGTGGGCGGTATAAACGATACCGCGC 43872 32 100.0 34 ................................ TACGAAGACAAGGTTATTAAGGCCGCGTTAAAGC 43938 32 100.0 35 ................................ AAAGGAACCGGCTGTACTACATCGGCGCTCACCCA 44005 32 100.0 34 ................................ CCTGCAACTGTTGGAGATATTGCCGCAGATCCAC 44071 32 100.0 33 ................................ TCGATGATGTGCTATGACCAGTTATCGCATAAT 44136 32 100.0 34 ................................ CATCTAATGGAGCATTAGAGCCATAGGTGAGCGT 44202 32 100.0 34 ................................ GTTTCCTCTGCGACCGTTAAGCATTCCAGAGATT 44268 32 100.0 35 ................................ CACCTGAGTCACCTACAAGCCCACGCGATAAACGG 44335 32 100.0 35 ................................ GAGCAAGGGCTTGATTCGGCAAGCAAGAAGGCCGG 44402 32 100.0 34 ................................ CGCAAAGTCTGGGAAAACACGTATGCCATCGGAA 44468 32 100.0 35 ................................ ACGATAAAACTCTTATTCTTCCCCGAATTGATCGG 44535 32 100.0 35 ................................ GCGTTTTTGCCCTGTCGCGTTCCCGCGTGTAGCCT 44602 32 100.0 34 ................................ GGTTTTTGCCGATTATGAGCATGTCTACACCCTG 44668 32 100.0 34 ................................ GTACCGCTCGCCGGTTGTGTTGATAAAAACCGTG 44734 32 100.0 34 ................................ GTTAAAATGCTCATGTGCTCCATTGCTCAGCCTC 44800 32 100.0 34 ................................ CTGACCACGTCCACGAGAAACTTAAAGAGTACAA 44866 32 100.0 34 ................................ TTATCTAAGTCTGACCAGTAGACAGGCTTCCGGG 44932 32 100.0 35 ................................ ACGTTCTGCTGTATGCGCCGAATGCCGGGAATCTT 44999 32 100.0 33 ................................ TTCTTTAACATGTAGCTTGCTTCGCCTGGTGAA 45064 32 100.0 34 ................................ AGTGATAAATCTCGGGTTCGTATGCGGGATACTC 45130 32 100.0 33 ................................ CTGAATACAGCAATGTTCAGGATTTGTCCTTTT 45195 32 100.0 35 ................................ TTCTATCGACTCCCCGCAGGCGTGAGGCTTTCCTT 45262 32 100.0 34 ................................ ACCGCGGCTAATGCCTACGCGGTTGTGATCTGGG 45328 32 100.0 35 ................................ AACCAGCTCACCTGTTGCAATATCCGCAACGGCTG 45395 32 96.9 35 ......A......................... ATGAATCCCTCGTCATAGAGGTACTTCACCTCCTG 45462 32 100.0 35 ................................ AACTCCCGGGCGGCTGCAACCCCCTTCTGAGGCGG 45529 32 100.0 34 ................................ TTTAAACTCCGGTTGTAGAATTTCCTTGTCGTAG 45595 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 53 32 99.9 34 GTCGCGCCCCTCGCGGGCGCGTGGATTGAAAC # Left flank : ATGGATATCCCCCATTCTTCTGGAGGTAAAAATCATGATGGTATTGGTAAGTTATGATGTGGCAGTCACAACGCAAGGGGGTCAACGTCGACTACGAAAGATCGCTAAAGCTTGTCAGAATTACGGACAACGGGTCCAGTTCTCCGTATTTGAATGCATCGTCGATCCTGCCCAATGGACTAAATTAAAAAATACCCTTGAGAAGATAATCGATACAGATACTGATAGCTTACGGTATTATTATCTTGGAGCGAATTATAAAAACCGTGTGGAACATGTCGGAGCTAAACAATCTATGGATGTTGATGCCCCGATAATTGTATGACGCGAACCTTGATGAAACAGAAAAATCCGGGACAATCGCAGATAAAATAATTCTTTATATTGTAAGGATCTTTGAAAAATCAGAGAAGGATATCATGTAAAATGTAGTCTTGAACCTGAGGTTCGCGAAATTGACCTTCTAATTTATTTTATGATATATATTTAACTGTACTTAT # Right flank : CACGGGTGGGTTTGTTAGATTGTACGGGTTACTTTTATAAGCTGTTGCAGGAATTATGACTAATTAGATGTCTGCAGGCTGTACTGTTTCCATCAGGGATCCGGTTTGTTCTTGCCAGATGCCTTATACTCAGTCATCTATAATCTATTGCATTTATCGCCTCCCACGCCACATTTTTAATAATGCCAATCCGCTCTTCTCACCACTAAGTCTTTCTGTCCTTAATGCCAGTACCAGCAACAGAGCAAGTATTCCCAGCACAAGCCTGAAAAAGACCCGGTAGACATCAAGGCCCTCCACACCGACGGCCCGAATCAGGCTTAAGGCGGTTCCTCCCCCCAGGGCACTGGCTATACCTGCCACCAGTCCGCCGGTCATGCGGGCAAAGAGTGAAAGCCCAACCCGGTCGGTCGGCTGAACGGCCTGCAGAAAATAGTGGTTCGTTGCAATAATAAGTCCTGTCTTGCAGTACCCCTGCAGAAGAAAAATCAGGGCTGTGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCTCGCGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCCTCGCGGGCGCGTGGATCGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.80,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //