Array 1 6611-6398 **** Predicted by CRISPRDetect 2.4 *** >NZ_PTIS01000027.1 Clostridium algidicarnis DSM 15099 Ga0131113_127, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ======================================= ================== 6610 24 95.8 39 ........C............... ACCGTAGGCGGAGATTCCTTACCCATCCAAAAAATCTAA 6547 24 100.0 39 ........................ GCTGTAAGCGGAGATTCCTTATTTCTTCCAAAAATCTTC 6484 24 100.0 38 ........................ ACCGTAGGCGGAGATTCCTTACCCATCCAAAAATCTAT 6422 24 91.7 0 ........C...........A... | G [6401] ========== ====== ====== ====== ======================== ======================================= ================== 4 24 96.9 39 GATTTGGTTGGTGGAGCTTTCTCC # Left flank : TTTTGAAAGCCCCTCTACTAAAATCGGTGAAGCATCCTTTTTACCAACAAATCCTACTATTCCACACATCTTTTTGTCTCCTTTTCTGTTTTGTTTTTTTACACAACAAATAAATCCTTTAAATATTACTTTAAAATTTCTTTGAAAATATAATGGCTCGTAAATATTTTATCCTAATATAAATATCTTAAGCATTACAAAAGACCTTACTACATCTTTAGTCCTTAATAGAAATAAAGATATAACAAAAAAGTCCTACATCAAAATTTAAAATTTAATTAAGGTAATTCATCGTGTTTTAGTTTTTTAATACTTATTAATTGATTAGCTTTAGAAACAAAAAAGAATTGAATATAGATAAGTTTTAACACCTAAATTATGTTGTGCTAGAAATCACTTTCTAGTTTTATAATTTTTTACGATAGTGCTATACCGTGAGGCACCCGCCGAAATCTCGATAATCCTCATCCTCGTCAACTAAAGCGACACCCCAAATCTAT # Right flank : TGGCGCTTATATTAAACTTTCAAACCTTATTTATTATTCTTATCTTTTATTATTCTATTTTATATCTTAAAAGCTATCACATCATTATATGCATTTTTCCATACTATCGTCAAGAGTTTTAACTATTTATTTCCATTTACAAGCTATGTATTTGCCTTACATATCATCATTCCTTATTTGAATACCAACAGAATTCTTTGCTACAAAAGGGCTAGTCATCATACAAAAAATTAAAACTTCCAAGTGCCCTGTCCCCCTTAATATGATACAATTATTTTAAACAGTATTTTAAAAAGCTTAAAATTAAGTGTTTCTATATATAGAATAAATATTGTTTTAATCTATTAAGTAAGGTAGGGTCACCAATGAGTAATATAAAAAAAGAAGCTGATGTAACTTGGTTAAATTTTAATATGAATAACCTTACAGAAGAATTTAAATGTTCTTTTGAAACAAGTGATGAAAACACAAAACAAGATAGTCACCATAAGCAATATAAT # Questionable array : NO Score: 2.51 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTTGGTTGGTGGAGCTTTCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,0.78 Confidence: LOW] # Array family : NA // Array 1 47492-33477 **** Predicted by CRISPRDetect 2.4 *** >NZ_PTIS01000010.1 Clostridium algidicarnis DSM 15099 Ga0131113_110, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 47491 30 100.0 36 .............................. CCTATAAGCATTTGTGGTGGCAACTCCTTAATATAA 47425 30 100.0 36 .............................. TTGTCTGACCTATCCTATGCACTCTATCCTCGCTCT 47359 30 100.0 35 .............................. CTATTAACACCTTTAATAATGTAATCACCAATGTT 47294 30 100.0 36 .............................. CAAGCAATTATCTAAAGAAACAATACCAACTATAGA 47228 30 100.0 34 .............................. GAAGTTAAGTATGCAGGGTTTAAGGAGTTACTAG 47164 30 100.0 37 .............................. CAACAATATATTCCTTATATAAATAAGAATAAAGAAG 47097 30 100.0 36 .............................. TTCTTTCCATTTGCATATCTCCGCCATCTACAAGTG 47031 30 100.0 36 .............................. TAGTGTTAAATTTCACTTCCTTTATTTTTTCACTAT 46965 30 100.0 36 .............................. TTACTATAGTAGATTATATAAGAGCAAAATTGAAGG 46899 30 100.0 36 .............................. TGGAGGCATTAGAAGATGTAGAAGAGATCCAGGGGT 46833 30 100.0 36 .............................. TATAAACCTAAAAATGCTAAAGCATTAAAAGCACTT 46767 30 100.0 36 .............................. TCAGCTACATAATAGTATATTTCTTGCTGTTCATCC 46701 30 100.0 36 .............................. ATATCTATAGCGAGAACGAAACAAATTTTAAACACA 46635 30 100.0 37 .............................. AACTTTCCACTAATTTTATCGTAGAAATCAATGCACC 46568 30 100.0 37 .............................. AAGAGTTGGTGGAAAATGCTTATGAAAATGCAAAAAG 46501 30 100.0 34 .............................. AAATTAGAGAAGGATAATGTAACTCCACATTTTG 46437 30 100.0 36 .............................. ATGTAAGTGGTCAAATCCTTCATAATATAGCTGTTT 46371 30 100.0 35 .............................. GAAGTTGTTAAAGTTTCATCTATGTCCTTATCCTC 46306 30 100.0 35 .............................. TGATGAAGTTGTGTTAGATGTACCTAAAGAAGTAG 46241 30 100.0 35 .............................. TTAATTTTATAATAAGGTTTATTATCCATTTATAG 46176 30 100.0 36 .............................. TAAATTTATCTAAGAGTATTTCTTCCCTTGCTATAT 46110 30 100.0 36 .............................. CCTACAACATAATCTAGATCTAAAGTAAGCATTGTC 46044 30 100.0 36 .............................. TATTCTGTCGGCACATTTACTCTGTTTTTCTTTAAT 45978 30 100.0 37 .............................. AATGGTTAAAGGACTACAAAAGCAGTTCGATGATTGG 45911 30 100.0 35 .............................. GCTGCTAAATCATAAATATTTAGAGTGGCATTATC 45846 30 100.0 35 .............................. CAATTTTTACAGCTTTATCTCTACTTTCGTTCAAG 45781 30 100.0 35 .............................. TCTGTTATAAATGTGTATATATCCTTTTGGCTGTT 45716 30 100.0 36 .............................. ACGATTGCAATATGCCTCTGTATTGTGTGCTTACTT 45650 30 100.0 36 .............................. GCTAAATTTTTATATCTAGTTTGGAATTCTAGTTTT 45584 30 100.0 36 .............................. ATAGCCATATAGCTCCCCCCAATTTTTAATTATTTT 45518 30 100.0 35 .............................. TAAAACTCTTTATCTATAAAATACATATTATTAAA 45453 30 100.0 36 .............................. TGGTGTCGCTATATATTTTTGCCTTTTTTAATGCGG 45387 30 100.0 36 .............................. CCAGCGATGATGGGCTTTATAGGCATTATGTTACTG 45321 30 100.0 36 .............................. GCCTTTACAAACTTAACTGATATAGGTACTATGGTT 45255 30 100.0 35 .............................. CCGTTTGTGGTAGTAATCGTTGTGCGGGGGTTCTT 45190 30 100.0 35 .............................. TACTTTATCTCCATGACCTAATTGCACCTCCTTAA 45125 30 100.0 35 .............................. TAAGTCTTTTCATCTGAATTATTAAAAGCTTCAAT 45060 30 100.0 37 .............................. ATGTTTCTTTTTCTCCTTCTAGGATGTAGCAGTTCCC 44993 30 100.0 35 .............................. TGTAATTCTCTTCCACTAACTATTACCTCGCCAGT 44928 30 100.0 36 .............................. TGCAATATAGTACCATTTATAACCGATAAATTATCC 44862 30 100.0 37 .............................. TTAACTTTTCTGTGCCCACCTCTTTATCAGTGCCATT 44795 30 100.0 36 .............................. GAAATGAAGAACCTTAATAATTTAACCCTAGAAGTG 44729 30 100.0 36 .............................. AATTGATGTAAAGAAGGATTAGCTTTGTGCCACATC 44663 30 100.0 36 .............................. AGTTACACATTAATAAAGAGGTAGGAAAGACACTAG 44597 30 100.0 36 .............................. TGCTTTGCTTAGCCTCTTGTAATATGTTAGCTTCAA 44531 30 100.0 35 .............................. ATGTCAAAACCCACTTCTTTTAATGCTCTTGCTAA 44466 30 100.0 36 .............................. TACGTTGCATTATTAAAGCCAAGGCCTATACTCTCT 44400 30 100.0 37 .............................. AATAAACCAACAGTACCCAATCGGGGATATTCCTTTG 44333 30 100.0 35 .............................. ATGCTTCCGTCCTGGAATAGCATACCAATATTACT 44268 30 100.0 35 .............................. ATGCTTCCGTCCTGGAATAGCATACCAATATTACT 44203 30 100.0 35 .............................. ATGCTTCCGTCCTGGAATAGCATACCAATATTACT 44138 30 100.0 35 .............................. ATGCTTCCGTCCTGGAATAGCATACCAATATTACT 44073 30 100.0 36 .............................. CAAGTCCTTATTACTATATCTGCTAGCTCCTCTTCG 44007 30 100.0 37 .............................. AAATAAGTCATTATAGCTACAGATACAATTGCAGATA 43940 30 100.0 36 .............................. ATACTTCCGTCCTGGAATAGCATACCAATATTACTA 43874 30 100.0 36 .............................. ATACTTCCGTCCTGGAATAGCATACCAATATTACTA 43808 30 100.0 36 .............................. ATACTTCCGTCCTGGAATAGCATACCAATATTACTA 43742 30 100.0 36 .............................. ATACTTCCGTCCTGGAATAGCATACCAATATTACTA 43676 30 100.0 37 .............................. ACGGCATTTGCTTTTTGACTAGAAAAAGAAAATGAAA 43609 30 100.0 36 .............................. GCGTCATTGTCTATTGTAAACTTTAATCCTGTAGCA 43543 30 100.0 36 .............................. TACATAGTATCTAAATTAATCATTTTTCAACTCTCC 43477 30 100.0 36 .............................. TATAAATTTTTACTGTATAAATATGCAACCTTATTT 43411 30 100.0 34 .............................. TCATCACTTATTAATGCTTGTACTGGATTTTTAC 43347 30 100.0 35 .............................. GCCTCTAAGATGCATAAAAGTTAAATCTTTTATAG 43282 30 100.0 36 .............................. CCGCCTTTATAGTATACTGTGTACCAATTGCTACTT 43216 30 100.0 36 .............................. CTGTTCCTATTGGTGCTAGAAATAATGAAGATAATG 43150 30 100.0 36 .............................. AACTGATTACAAGGGCGAAACTAAACTTGCTAAGAA 43084 30 100.0 35 .............................. TTTGGAAACACTAAGTAATTAAATTCATATTTTGA 43019 30 100.0 34 .............................. TGGCGTGCAATATGAAACTTGCAAAGCAGTACAC 42955 30 100.0 36 .............................. ATGACCTCTGTTGCACTTCCTTGACCTAAAACAAGG 42889 30 100.0 36 .............................. ATAAAGAGGTAAGCAAGACACTAGAGATAATAGGAC 42823 30 100.0 35 .............................. TGATGGAGAAGATGTAGTTGATGTATGGGATATAG 42758 30 100.0 36 .............................. AAGTATCTACACTTATACCTGTCTTTTGGCCTTCAT 42692 30 100.0 36 .............................. ATATAAATTTAGATAATGGTAGTTTTAGGATCGGTG 42626 30 100.0 36 .............................. TCTTTATAGTCCACATACTCTCTTTCCATAAGCATT 42560 30 100.0 36 .............................. GAAGTTTTAAGGCAAAACACAGGCTTGAGCGAATAC 42494 30 100.0 35 .............................. CTGTTTGCGCATATATCAATATGGTATTCTTTAAC 42429 30 100.0 36 .............................. ACGTTTCTAGTTCCTTCTCTTGTAAGTGGCGCCATC 42363 30 100.0 37 .............................. AAGAAAAGTATTTAAAAGAACTGGAGGAAAAATAAAA 42296 30 100.0 34 .............................. CAAGTATCGAGCAAGCTAAAACCTTTGAAGAAAG 42232 30 100.0 37 .............................. TTATTATCTATTTCTAACTGCCTACTCCTATCTAAAA 42165 30 100.0 36 .............................. ATTTAATTACACTTACCATCTATATTACAACTCTTA 42099 30 100.0 36 .............................. TTGTTGATAATTCGTTCATATTCAATACTGTAAACC 42033 30 100.0 36 .............................. TGTGGCAGCTTTCACACAATCCTATAGCGTTGTCTA 41967 30 100.0 35 .............................. TATTGTATCCATCCATCTTTATTGCCGTATTTTAA 41902 30 100.0 36 .............................. TTATCAAGCCTACATATAAAAGGCAACATACCATTA 41836 30 100.0 36 .............................. AATGCTGCTATGTATTCTTTCCTTTTTTTAGTATAT 41770 30 100.0 36 .............................. TGATTTGGAATTTTTGATTATCATTTAAATCATCTT 41704 30 100.0 35 .............................. ATACTAGGATCATACGAAATATCAATTTCCTTATC 41639 30 100.0 36 .............................. AAAAGCAAATGCAGTTGAAATTGAAACTTTAAAAGA 41573 30 100.0 39 .............................. TGTTTAATCTCTACTCTGTATATCCGCCCATTAATAAAT 41504 30 100.0 36 .............................. GGCTTAATCCCATAGGTTAGTTCTTTGTTTTTATTA 41438 30 100.0 37 .............................. CTTGTAATTAATCCACCTGTTGGTTACTCCCTTTATG 41371 30 100.0 34 .............................. AGTAAAGGATTAAAACAATCAGAACTAATAAAAA 41307 30 100.0 36 .............................. AAAAAAGTTTAAATTTAAAATAAAAAATATAAAATA 41241 30 100.0 37 .............................. CCTTTAGAATCTTTAAACCTAAGATTTGCGTCAGTAG 41174 30 100.0 36 .............................. ATTTGAAGAATTAAGAATGCTTATGGAAAGGGAGTA 41108 30 100.0 36 .............................. TTTTCAAAACATTCCTGTACATATTTAACCAACTGG 41042 30 100.0 36 .............................. CTAGCATTTCTTGCAAATTCTCCTATCTTTTCTATC 40976 30 100.0 37 .............................. TGTGCGAGGCTCTTCGCTCTTGTCTAAAATCCTCCCG 40909 30 100.0 34 .............................. AAAGAGGGTTAAAAAGCAACCTCCCAATATTATT 40845 30 100.0 36 .............................. TTATCTACTGCTATAGAAAATATAACACTTCCATAG 40779 30 100.0 37 .............................. GAATTAAAAGGAGTCAATGGAATTTTAGAACTTTATG 40712 30 100.0 36 .............................. AATAAGAAGGTGGGGAAATACTATCCGATTCACCTT 40646 30 100.0 37 .............................. CACGCTCTGCTTAATTGGCTTAATGCTATTACACATA 40579 30 100.0 36 .............................. TTATTTCTACTTTTTCCCCTCTTGCTATTTCTTCCA 40513 30 100.0 36 .............................. TTGTTGATAATTCGTTCATATTCAATACTGTAAACC 40447 30 100.0 36 .............................. TGTGGCAGCTTTCACACAATCCTATAGCGTTGTCTA 40381 30 100.0 35 .............................. TATTGTATCCATCCATCTTTATTGCCGTATTTTAA 40316 30 100.0 36 .............................. TTATCAAGCCTACATATAAAAGGCAACATACCATTA 40250 30 100.0 36 .............................. AATGCTGCTATGTATTCTTTCCTTTTTTTAGTATAT 40184 30 100.0 36 .............................. TGATTTGGAATTTTTGATTATCATTTAAATCATCTT 40118 30 100.0 36 .............................. TTCTTTTAAGTCCTGCTTGGAATAATTCTTCTTTTA 40052 30 100.0 36 .............................. TTTATATTATCAACTCTTTCATTTGTATCGTTAATT 39986 30 100.0 34 .............................. TACAGGGAAAACATATAATTTTCTAATACAAATG 39922 30 100.0 35 .............................. AAAGTAGGGTAGTAATCACCTCTAGGTTTACTATA 39857 30 100.0 36 .............................. TTCTTTTAATCTTTGCTTTTTCTCTTTCTAGTTTTT 39791 30 100.0 36 .............................. AATACCAATTTATTCCTTTTCATTTTAATCTACCAC 39725 30 100.0 35 .............................. ATACTTCATTTCCATTTTTACCCACTTATATTTAT 39660 30 100.0 37 .............................. TTATTAATCTACCACCTTATTAATTTATTAGCTTTAT 39593 30 100.0 35 .............................. ATTATTAGATACTAATTAATATACATTGTTTATAT 39528 30 100.0 36 .............................. TACGCTATGTAATCTATTTTTTCCCTACGCTTTGTA 39462 30 100.0 35 .............................. ACAAAGCTTTGAAATGGTGATTGAGCCAGTTGGAA 39397 30 100.0 35 .............................. TAAATCAAAGGAAATGCTTAAGTCATTAGACAGTG 39332 30 100.0 37 .............................. GCGAAATTGTTATGTGCTCCACTGTTTCCTTTAGCAG 39265 30 100.0 35 .............................. AACTAAAGTATCTCAATTAGGTATGCCAAGTTTTG 39200 30 100.0 37 .............................. TATGTTCCACTAATGGCATTATTTCTAATTTCTTTAT 39133 30 100.0 35 .............................. ACTTCTTTATAATGTTCTATTTTAACAACCACATA 39068 30 100.0 36 .............................. CTTCTTTGAAATTCATTTTGGGTTTTAACCAAACAA 39002 30 100.0 36 .............................. GATCCTGGTGATAGGTGTATTTTAGGCTTCACATAT 38936 30 100.0 37 .............................. GATCCTGGTGATAGGTGTATTTTAGGCTTCACATATA 38869 30 100.0 36 .............................. TTTTTATTCATTTCTATTCCACCTTTTTTTATTTTA 38803 30 100.0 36 .............................. TCTACTCCAATTATTTGTTTAAGCCTTAATAACTCG 38737 30 100.0 34 .............................. TTGATCTATATGACAATATAAAAACTAGAGTAAA 38673 30 100.0 36 .............................. CTATAGCTAATGCCCCAAGTATTTTCTCCAAAATTG 38607 30 100.0 37 .............................. TCTCCTAGTATAGCACCCACCACAGCTTTAGCATAAG 38540 30 100.0 35 .............................. TTATTAATCTACCTACCTTTATTCTTTATTAGCTT 38475 30 100.0 35 .............................. TTAATATAGCTTTGTCAAGTATTATTTAATAAATA 38410 30 100.0 35 .............................. ACAGAATCGATGCACCTTGTAACCCTTGGTATCAC 38345 30 100.0 34 .............................. TCTATCGTAGGTTCTTCCGGATCTATAATCACGG 38281 30 100.0 34 .............................. TCAATTAGAGACTAATAATATTGAAGCAATGCTA 38217 30 100.0 36 .............................. ATGTAATGGACATTATTAACTTGCCCTATACGGTGC 38151 30 100.0 34 .............................. AACTTAATGGCCATTACAGATGCTGCAGTGCCAA 38087 30 100.0 35 .............................. GAATCTTTTATGCTTACATTTAAGGTTAATCCTTT 38022 30 100.0 35 .............................. GGGCTTAAGGGAGATAAAGGCGATACTGGAGCTAA 37957 30 100.0 36 .............................. TGGATTGATGTTTTAATGATTCAATCAAAGCTATTT 37891 30 100.0 34 .............................. CCAAATACAACTGTATAGCCTTTTTTCGGTTTAC 37827 30 100.0 34 .............................. TCCAAAATGTTATTTAGTTTTTCTGTAGCATTTT 37763 30 100.0 37 .............................. TCTATTGTCCATTCTTTTTCTATGCAGCTACAACTTA 37696 30 100.0 35 .............................. GGGGTTCTTGTGGTCCGACTTAATTTTTCAACTAG 37631 30 100.0 34 .............................. TATACTGTATTTTTATTAGTCTTTAAAATTGAAG 37567 30 100.0 36 .............................. GTAGACATATAAGTTGTTGTGGGTTCAAATTGGATA 37501 30 100.0 34 .............................. TTAATTTTATAATAAGGTTTATTATCCATTTATA 37437 30 100.0 37 .............................. TTTGTTTTTTACTAAAGTTTATAAAGTACCTGCATAT 37370 30 100.0 36 .............................. TCTGTCAAAAATCAAAGTTAGATGATTGGTGTGAGC 37304 30 100.0 35 .............................. TCATCTGTTCTTATACAAGAAAAAAATCCTCCTGC 37239 30 100.0 35 .............................. GTATGAAGATTATAAAAGCATACAGGTCTTTAAAA 37174 30 100.0 35 .............................. AATAAAGCTGGTTGAGGTTATTTATGATTCTAACA 37109 30 100.0 36 .............................. AACTTGTCCACCTTATTATTACCAAACTTCTCTGGA 37043 30 100.0 35 .............................. CCTGACATTTATAAATCCTACGAATAAAAAGCTGA 36978 30 100.0 36 .............................. TAAGTACTTTAGGTGCCAGCATTCTCACTCCTAGTT 36912 30 100.0 36 .............................. CATATATGTACAATCCTTTTATTGTACATATAAACC 36846 30 100.0 35 .............................. CTTTCCAATGTTAAGCAAAAGTATGGTTACAAATG 36781 30 100.0 36 .............................. GTCCATGTGCCATTTATTTTATATTTGCATTTATAT 36715 30 100.0 36 .............................. AGCCTAATTTATTAACATGTGCTAAAACTCTGGATT 36649 30 100.0 35 .............................. CTAGCGTGCATCGGATAAGGCTGAACATTTATAAG 36584 30 100.0 36 .............................. CTTCCAATAACCTTTAACAACCCATTTTTAACAGCA 36518 30 100.0 36 .............................. TACAAGGCGAAATCATCATCCGGGTTCCCAATCTAT 36452 30 100.0 36 .............................. CAGAGTACCCTAAATTGCTTGCTCAAGCGAACAAAT 36386 30 100.0 35 .............................. CAAGTACCAGAAGGTACTATATCAAAGGATACTGC 36321 30 100.0 34 .............................. ACATCATGACCAAGTATTTTAGCAGCAGTCTTAA 36257 30 100.0 36 .............................. AAGTAAAGCTTTGGAAGATACCAAAGATTTTAATAA 36191 30 100.0 35 .............................. GCAAGTAATATCGTGGTGGGCTCGTGTGTATCAGT 36126 30 100.0 36 .............................. TTTCTATGTTAGGAAAGATGGGTCAGTATATAGAGG 36060 30 100.0 35 .............................. TAGCTGTATCTTTTCTTAATCATTTCACCTAGTAA 35995 30 100.0 36 .............................. AATCAATTTACACCTGTATAATTTACTTTTTCATAA 35929 30 100.0 35 .............................. ACAAACTCACAAGTTCCATGTATATTTTCACAAAA 35864 30 100.0 36 .............................. GCGTCCATACCTAATTGTTTGCATATTTCATAATCC 35798 30 100.0 34 .............................. TTTCTAGTAGATCCTTATATTCTTTACCTAATAA 35734 30 100.0 35 .............................. CACATCTTGAATCTATCACAACATGGATTCCCAAA 35669 30 100.0 36 .............................. TCAGGGTAAGGTGATCTATTATTAATACGTCTAAAC 35603 30 100.0 35 .............................. TTGTCTTTTCTACACTTAAGGTAATCAGTCTTTTC 35538 30 100.0 35 .............................. GCATCTAAACCCATATCAGTCACCCATGATTTAGG 35473 30 100.0 34 .............................. TAAGATATGATCCAATCCATTGAATTTATATTTA 35409 30 100.0 36 .............................. TGTAGTTTTCTTCTCCATTCCTCCATGGTAAAACCT 35343 30 100.0 35 .............................. GTGGCATTTATGGAGCAGTTTTTTAATTCTTCATC 35278 30 100.0 36 .............................. ATTTTAGAAGCTAGTGTAAAAAGATTTATAGTAACA 35212 30 100.0 35 .............................. TCCCTGGCTGTATACAGGTCTTCTTCTGTAATGTT 35147 30 100.0 35 .............................. TTGTTTACTATAAAAGTGCCTATGATCGCCTGTTC 35082 30 100.0 35 .............................. CCAAAGTTATTAGGACTTTGAGAAGCTTGACCACT 35017 30 100.0 34 .............................. TTTCTATGTTAGGAAAGATGGGTCAGTATATAGA 34953 30 100.0 37 .............................. TAAGTACATTACACTTAATACCAGGTACGTGCACCCT 34886 30 100.0 37 .............................. TAAGTACATTACACTTAATACCAGGTACGTGCACCCT 34819 30 100.0 37 .............................. TAAGTACATTACACTTAATACCAGGTACGTGCACCCT 34752 30 100.0 37 .............................. TAAGTACATTACACTTAATACCAGGTACGTGCACCCT 34685 30 100.0 34 .............................. CACCAAGGAGGTGAAAAATAGTGGATAATACTAA 34621 30 100.0 36 .............................. ATAAGAAAGGGATGGGGTAATGGAAATTAATTTTCC 34555 30 100.0 35 .............................. AACATTTATTCAATATATCCATATTTCACATCTGA 34490 30 100.0 37 .............................. ATTTCACCTCGCTTATTAATTCTTCAAGTTCATTAGT 34423 30 100.0 35 .............................. AAAGGAACGTCAACATAATTTAGATTTATTTGAAG 34358 30 100.0 35 .............................. AAATAAGGAGGTGAGTAATATAAGCGCAGATTTAG 34293 30 100.0 34 .............................. GCATCACACAGTTCAATCTTAGTTGGGGAATTAG 34229 30 100.0 34 .............................. CAAACAAGACCTATCGGCATTGGCGGTATTTTAG 34165 30 100.0 37 .............................. TATGGATTATTAATATTGCCACTATGGTCCACTTCTT 34098 30 100.0 35 .............................. AATAGATGGTGGTCCAATGACAAGTGATTCTTTTA 34033 30 100.0 35 .............................. CAATTTATTTCTCCTGCAGTACAACAATTATCCCA 33968 30 100.0 36 .............................. TGTAAGGATACTCATAAGTTTTAAGCTCGATTTCTG 33902 30 100.0 36 .............................. AATTCTAAAACTCGAACATGAAACCGAACCATTGTT 33836 30 100.0 35 .............................. CAGAAAAAGCTACTAAAAGAAAATAAGATAACAAA 33771 30 100.0 36 .............................. AGCACAGAGCAGTTCAATATAATGCTTCAGTCCAGC 33705 30 100.0 37 .............................. AGCGAGTAGAACTTATGAATAGTTAGAGGTGAACTAT 33638 30 100.0 36 .............................. CCATCATAATCTATTTTTAAAAAACTTTTAGTTTCT 33572 30 100.0 36 .............................. TTGACTTGTAAATGTCCATCACATGAGATTCCTTAA 33506 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 214 30 100.0 36 ATTGAACCTTAACATGGGATGTATTTAAAT # Left flank : AAAATATTTATCTCACTTTCAAAAATCAGTATTTCGTGGTGAAATAACAAATTCTAAGTTAATACTTTTAAAAAAGGAAATTGAAAATATAATTGATCCTTCCACAGACTTTGTATGTATTATAAAGCTTATGAATGATAACATCTTTGAAGAAGAGACATTAGGCAATGGTGAATCCACTGGTGAAGACTTAATAATTTAACATTCTTTAAATTATGATAATCATGTTGTAGTTTCAAGTTATTGTCATAGCCATTACCTTCTTTTGTACATTAAGCATAGCATCATAAATCATCATATAAAACTTTCTTATTTATATAAATAATCATCCCAGCTAATTTATACGTCCAAAGCCATAAGCCCTAATGAATCCAACCTTTCAGGGCTTATATACTTAATAAATCGATAATAGATATTTTCCCTGGGATAAATTCTTCAGAACCCTTTAATAGGAACGATTTAGTGATATAATAGAAATAAGAAATGGCTTAAATGCTGTG # Right flank : TGTTTTCTTTGGCTCCCAAATCCTTCAGTTTATTCTATTCAATCTTTTAAAGTCCACTTAAAAGTGATTCCCCTTGATAGGTAACCCCTTCCGCCGCAACAACCTATCTTGAATTTATCCGCTCTTATTACCCAGTGTAAAAGAAATTAATAAATTAATTAATTATTAGTAATAATTTTTCCTCTTATTGCACATAATATTAATCGTAAAGCTTAACTTAACTACTAAATTAAATATAGGAGGTCTACTTATATGAAAGAAAAGTCCTATGCCTTTAAAAATGAAAGGGGGGAGCTTATAAATTACATTGTTAAAGAGTATCTTTCGGTTAATAGCAGTGACTATGTAATTATGTCACCTGAAAATAAAGCTACACAGCTGGAAGTTTATAAGTTTAATCTTGAAGATGGTAATGAGTACTTAGATGCTGTTAAAAACCAAGGGGAGCTTAATTTAATAAAAGCTTCTGCAAAGACTATTTAATTTAAGCTTTACATAAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACCTTAACATGGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //