Array 1 735808-738478 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADVGB010000001.1 Citrobacter koseri strain CB00128 CB00128_c0001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 735808 28 100.0 32 ............................ GCTCGCGCACTCGGCCTGCGCGCCTACATCGA 735868 28 100.0 32 ............................ GTTGGTGATGACTTACTGGTCGCGCTTTTGTT 735928 28 100.0 32 ............................ GTAAATGGATGTCCAGAGGCGAGCAAATACAT 735988 28 100.0 32 ............................ GAATGGATACGATGGAATAACCCTGGACTACA 736048 28 100.0 32 ............................ GTATCCAGTTTGAATGAGTGTTGGGACAACTA 736108 28 100.0 32 ............................ ATCAGATGTGCAGCAACAACCGTATGATGATC 736168 28 100.0 32 ............................ AGGTGCCGCAGGGGTATATGTAACACTGGTGC 736228 28 100.0 32 ............................ AGTCGATGCACTCAGCAGCAGTACGCCACGGC 736288 28 100.0 32 ............................ ATGCGCGAAGGTATAGATCAATTCCTGACGCC 736348 28 96.4 32 C........................... AGTACGTATGGACTGGCTATGCTGATGCCGAC 736408 28 100.0 32 ............................ ACGACGAAAACGCCATTGCGATGCATAAGACG 736468 28 100.0 32 ............................ GTTATGACCGTCCTAAGAGTGACGGTATTATC 736528 28 100.0 32 ............................ AGTCGGCAATCCGAAATAATCACCGACAGAGC 736588 28 100.0 32 ............................ ACAATTAAAAATAAAATCCTCAAACATAAAAC 736648 28 100.0 32 ............................ GTGAGGCGTGTGAAATAAACGCGCAGGTAGAT 736708 28 100.0 32 ............................ CAAAGCCAGCAACCCCGTAGCCGCAACCTCCG 736768 28 100.0 32 ............................ ATCGGGTGAGTGAACAAGGCGCTAACCATTGC 736828 28 100.0 32 ............................ GGTTTACAAGTTGATGACGTACCGCCCGCACC 736888 28 100.0 32 ............................ TGGCGGCGAAACTGCGATTTTTGCGCCTCACG 736948 28 100.0 33 ............................ CATAGACTCAGCATTAGCATAACCAGCGACATA 737009 28 100.0 33 ............................ TCAGCGAATGGAGGCGGGACGGCGTTGCCACAT 737070 28 100.0 32 ............................ ACGTGGGGCTGATTATAACCCGCGGCATATTG 737130 28 100.0 32 ............................ AGTGGCGTGTTTCTTTACGGAACGCACGATTA 737190 28 100.0 32 ............................ ACGAACTGGAGAGCGCAATTCGATTTGAGTTC 737250 28 100.0 32 ............................ TCGAGCAGGTAGGGGCAATGCCAGGTCAGGGA 737310 28 100.0 32 ............................ CACGAAGTAGCCGCCGGTGGCGTATGAATGAC 737370 28 100.0 32 ............................ AAGTGGATGCCTCAACCGCTCTTATGGGTGCA 737430 28 100.0 32 ............................ TCTTCGTCGTCGTGGCACGCCACCCACTCACC 737490 28 100.0 32 ............................ AGTACCACGCGGTAAAAAAATCCAGTACCCCC 737550 28 100.0 32 ............................ TTAATACTTCAGAAGGAGCTGAGCGTGCACGA 737610 28 100.0 33 ............................ ATCAGCGAAACGACGGCGCAGCTTAACCGACAG 737671 28 100.0 32 ............................ CGGAAGTGTTGATGATCTCCGATACTATGAAA 737731 28 100.0 32 ............................ GCGCCGGGGTGTCTGATGCGTACAAAGCAGCA 737791 28 100.0 32 ............................ TGCTCACCGACCGAGGGAGCCCACCACGTCCG 737851 28 100.0 32 ............................ CATACCACGAGAGTGCAGGCAACGATTACCGT 737911 28 100.0 32 ............................ AGTGAGAGACGTTAACCGCATCATAAATGAAT 737971 28 100.0 32 ............................ ATTCATACAGGTATGCGACACGGTGAGCTGTG 738031 28 100.0 32 ............................ ATAAAAAAGCGCTTTCTGATTGTCGGTGTACC 738091 28 100.0 32 ............................ AATAGCAGAACCCCATCCCATAGTTTTTACTC 738151 28 100.0 32 ............................ GCAACTTTCGTAAACATGCTCGGCAGCACAAA 738211 28 100.0 32 ............................ GAACACGTCATCGTTAGGATTATCACCTACAC 738271 28 100.0 32 ............................ ATCACCTGAACCACACACGCAAATATATGAAC 738331 28 100.0 32 ............................ GAAATTAAAATCGTAGTCAAAACGCTGTGGAA 738391 28 100.0 32 ............................ ACATGGGCATTCCATTATCGCCGACTTTTCTT 738451 28 85.7 0 ......................ACC.C. | ========== ====== ====== ====== ============================ ================================= ================== 45 28 99.6 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GGATCAGAAAGGCGTCTCCCTGGAAGTGAGTCAGGAAGCGCGTGACTGGCTGGCAGAGAAAGGCTATGACCGCGCGATGGGCGCACGTCCAATGACGCGCGTCGTCCAGGACAACCTGAAAAAACCGCTGGCAAACGAGCTGCTGTTCGGTTCACTGGTTGGCGGTGGCCAGGTGACCGTTGCGCTGGATAAAGAGAAAAATGAGCTGACGTATGGCTTCCAGAGTGCGCAAAAGCACAAACCGGAAGCTGCGCATTAATCTCGTAACCGGTAAAATCTGAACGCCAGTCGCGTTCAGATAAACTCGCTAAAATCCGTAATCTCTTTTGAGGTTACGGATTTTTTTTGCCGCCATGCCCCGGATACCTGGAAACCCTTTTTTTGAGTGTTTTTTAACGCTATGATTTTTATGTGTTTATATTAGGTGGCGATAAAAGGGTATTTAATCATTTCGTTGATATTTTTCTTTATTAACACCATGATAGCGACGAACTGCTTCA # Right flank : ACCACAAATGTAATTATTTATTTTGAAAGCTCTTTTGTTGATTTTTATCATTTCATCTGCCGGAGCCTCATCAGTACTATCGATAACACATAAAATGACGGGGTTTAAATAGATATGTCTGCAAATTCAATTATGCCTTCGGATTTAAAAACCATTCTGCACTCTAAACGCGCCAATATATATTATCTTGAAAAGTGCCGTGTGCAGGTAAATGGTGGGCGAGTTGAATACATTACGAGTGCAGGTAATGAATCATATTACTGGAATATTCCTGTCGCGAATACTACGGCGGTGATGCTGGGTATGGGCACGTCAGTGTCACAGGCGGCGATGCGGGAGTTCGCAAGGGCTGGCGTGATGGTTGGCTTCTGTGGCACTGATGGTACGCCGCTTTATTCCGCAAATGAAGTTGATATTGATGTGTCATGGCTGTCACCGCAAAGTGAATATCGGCCGACTGAATATTTACAGCATTGGGTCTCTTTCTGGTTTAAAGAAGA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 749862-750249 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADVGB010000001.1 Citrobacter koseri strain CB00128 CB00128_c0001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 749862 28 100.0 32 ............................ ACCTCCGCCAATGCCATTTCTCAGCACATCCA 749922 28 100.0 32 ............................ AGTCTGAGAAAACAATGGTAGAGGCTTTTGCT 749982 28 100.0 32 ............................ AGTCAGCAAAATACCGCCAGGCTGATGTTGCA 750042 28 100.0 32 ............................ AGGACGATATCGGTAGCCGCTGAGATTCAGCG 750102 28 100.0 32 ............................ TACCATCGCAATCGCCGTTGCAAATGCCGCAT 750162 28 100.0 32 ............................ AATCAAAATCCCATCAACAACACGTTCCTGGC 750222 28 82.1 0 ...........C........T.C..T.T | ========== ====== ====== ====== ============================ ================================ ================== 7 28 97.4 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AGAACTGCATCACTGGCCCGGACTGAGCCTGGCTTCAGGTAAACATATCCACCGCTGGGAACTCTTTGGTCCGCAGGGCGCGCGCGCTGAAGTTCACTTTACACCGCGTTTGATCACTACAGACATGCTGGCGCTGCGTGAAGCGGCCGTTGCGGGCGTCGGCCTCGTTCAGTTACCTGTTTTAATGGTGAAAGACCAACTGGCTGCGGGGGAGCTGGTTGCCTTGCTGGAAGGATGGGAACCCAGAAGAGAGGTGATTCATGCGGTATTTCCGTCCCGCCGTGGATTGTTGCCGTCCGTACGCGCACTGGTGGATTTTTTGACAGAAGAGTATGCGCGGATGGTGGAAGATTAAAACAGAGCGCAATACACCCTTTTTTATTTTATGTTACTAACTTATTGATTTTATTTTATATATATAACTTGGGTGAAAAAGGGTCTGACAGGAAGACGTTGCGTTTTTCTTCAATAAATCAACGTGATTGTCTGATATTATTCCT # Right flank : TTTAATGTAGAAGGAAGGGAAGCTGCGGGGAATAAAAATAACGTTAATTCGCATCAACGGTATTCATGCAGGAAAGGGACAACAAAAAGGCCGGATAAACCGACCTTTTTTTATCTTTACGCCACCCGGGCGTGAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAGGATGCGGATGTAGTTTTTACGCATTTTACCGGAGATGTGTGCAGTAACCACGTGACCGTTTTCTAATTCTACGCGGAACATGGTATTAGGTAACGTTTCGAGAACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCGTAATTTGAACCGGCAAGATAATGCCGAAGTTCTTTAAATAAGTAAAGATTTGCGCGTTTAAAACGCAGCAAATCAGGTTTGGCGCATTACTCCGAAAAACACGGCAAAGCCGCAC # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //