Array 1 5188689-5185183 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR699009.1 Pluralibacter gergoviae isolate MGYG-HGUT-02520 chromosome 1 Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5188688 29 100.0 32 ............................. GCATATGATGGTTTGTTGTCCGGGTCCTGCCG 5188627 29 100.0 32 ............................. TTCACCAGCAATCAGGTCATCAATCTTTGACG 5188566 29 100.0 32 ............................. CAATACGGCCGGCGACTGAATCAGCCTTACCG 5188505 29 100.0 32 ............................. TCGATGCCGGCATAAAAATGCTGGAGTCCGCC 5188444 29 100.0 32 ............................. GCTGTTTGCCGCGAGGCACGTCGCCGTCAATG 5188383 29 100.0 32 ............................. TGCTCCGTGGGACAGCTGGCCCTCGTAAAAAT 5188322 29 100.0 32 ............................. ATTTCCACCTATTTATATAACCCTAATGCTAC 5188261 29 100.0 32 ............................. ACCTGGCCAAAATGGAGACGGCGGCGAAGAAG 5188200 29 100.0 32 ............................. CAGTTATCAAATAGCTCTTAGCATTATTGTTT 5188139 29 100.0 32 ............................. TGCCGGATCTGTTTCAACTGTCGGAACCTGGA 5188078 29 100.0 32 ............................. TTCAGGATCCGTAAAGTCGGGACACCTACCTG 5188017 29 100.0 32 ............................. TGCAGCAGCTGAGTTTGCGGCCCCTGCGTGTC 5187956 29 100.0 32 ............................. CGCCAGCGACTCTACCAGGAATTCGGCTACCC 5187895 29 100.0 32 ............................. TACGGTATAAATTTCAATGGTCGGGACTACGG 5187834 29 100.0 32 ............................. CATTGAAGAACCCCTTAATCAGTTGGCAAAAC 5187773 29 100.0 32 ............................. TATACATATGAGTCACAGGCATTATCCATGAT 5187712 29 100.0 32 ............................. TGATGTGATTATACAGGTTGACGGATGGTATA 5187651 29 100.0 32 ............................. GAATAGCGTCTGGTCTCGCGGCGCGGACTCCA 5187590 29 100.0 32 ............................. CGATGATCGAAAAGTTGGCGGTGAACAAACGG 5187529 29 100.0 32 ............................. TCGGTCCCGCAGCTGGCACATAGGTGAGGTAT 5187468 29 100.0 32 ............................. GCAGATAGCTGCACATATAACGAGAGAGCGAC 5187407 29 100.0 32 ............................. GGAGTTAGCTTTAGCAAGCGCCTAATGAAGTG 5187346 29 100.0 32 ............................. TACGAAGCCGAGTATGGAAAGACTCCGCCGTC 5187285 29 100.0 32 ............................. GCAGATAGCTGCACATATAACGAGAGAGCGAC 5187224 29 100.0 32 ............................. GCGGAGTTTTTTACGTGATGGCATCCGTGGGC 5187163 29 100.0 32 ............................. GGCGCGACGGCGATATTTTCCGCACGTCGGAG 5187102 29 100.0 32 ............................. CTCGTTAAAGGTATGATAGCCATCTGACACTT 5187041 29 100.0 32 ............................. CTAAGATGAGATTCCTTTAGGTGTAGCTGGAT 5186980 29 100.0 32 ............................. TGAGCTGGCAGACCATGAAGGCCGGATATCTC 5186919 29 100.0 32 ............................. GCTGAGCGTGAGGTTTTCCTGGCATGAGTAGG 5186858 29 100.0 32 ............................. CCACCTGTAAAATCCACAGTTCTCTAATCTGC 5186797 29 100.0 32 ............................. TGATCAGGGCATTCGAACGGTTGGCATTTGAT 5186736 29 100.0 32 ............................. CAGAGTTTGTTTTATGTGCGCCCACGGGAGAG 5186675 29 100.0 32 ............................. CCCGGTCGGACTCAGTCCGGCGAACTTCACCG 5186614 29 100.0 32 ............................. ATGCCGGTGATTGGCGCGGCCACGGAGCGCCG 5186553 29 100.0 32 ............................. TCCCACTTTAGCGACCAGGATTTAGGGTCTAT 5186492 29 100.0 32 ............................. GCAACAGAAGAAAAGCTGGCAGCGCTCAACCT 5186431 29 100.0 32 ............................. TGATTCTGTAGCCGGTCGAATTGCATCTTCGA 5186370 29 100.0 32 ............................. GCCCTGCACATTTGCGCGTAATAAGGCTGTTA 5186309 29 100.0 32 ............................. GCCGGAGCCAGGTGACGGGGGTCGTCCCGCCC 5186248 29 100.0 32 ............................. CCCTTGCGGAACCAGTAGGCTACCGGGGCGCC 5186187 29 100.0 32 ............................. GTCAGAGCGCAGCAGGCCCGCCACCGCGCCAG 5186126 29 100.0 32 ............................. ACTGGAGGTGATGCCCAAGGATTCTGCCGTCA 5186065 29 100.0 32 ............................. GCGAAAAACCATCTGGCCCCACTGAATAACGG 5186004 29 100.0 32 ............................. GTACGCAGCGGGCAGCGCTATCTCATCGCGGT 5185943 29 100.0 32 ............................. CCACCTGCTAGCCCTGGTTGTAAAAATCTGCC 5185882 29 100.0 32 ............................. AACGCGCGCCGTTTCGTTGAACTGATGGCCCA 5185821 29 100.0 32 ............................. GCGAGCTGACGCTGGATAAATTCGTTGATGGC 5185760 29 100.0 32 ............................. GTGTCAGATGCTGCGCAATTTGCCGATTGCAA 5185699 29 100.0 32 ............................. AGTTGTCACCTCGTTACCGTGCCCGCAAGCGA 5185638 29 100.0 32 ............................. ATTAGGCAAAGCAGCGCGCTGTACACGATCGC 5185577 29 100.0 32 ............................. CGCAATCATCAGTAAGTCGTTTGATGGCCTCC 5185516 29 100.0 32 ............................. ATTTCTCCCCGGCCAGCCAGGACGCGGTTGCA 5185455 29 100.0 32 ............................. TTTCTCGGCATGTCGCCGAAAATGGGCAGCGT 5185394 29 96.6 32 ....................A........ AAAAAACGTCATCAACGAATGACTATGCGCTC 5185333 29 100.0 32 ............................. AATGGCAGACGCAACATGCCGATATAATTGGC 5185272 29 96.6 32 ........T.................... CTGCCACGGTAGAAGCGGTGCCAGCTATACCT 5185211 29 96.6 0 ..........................T.. | ========== ====== ====== ====== ============================= ================================ ================== 58 29 99.8 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGGCGGCCGGAGAGATCTCTCCACCCGAGCCGCCCGCCGACGCGCAGCCGATTGCGATCCCCCCTCCGGTCTCGTTCGGCGATGCTGGTCACAGGAGTTCGTAAGCATGGCGATGCTGATGGTTGTTACCGAAAACGTGCCGCCCCGCCTGCGCGGCAGACTGGCTATCTGGCTGCTTGAGGTACGGGCGGGCGTCTACGTCGGCGATACCTCCGCGCGAATACGCGAGATGATCTGGCAGCAAATCACCGCCTTCGCTGAAGAGGGCAATGTCGTTATGGCGTGGGCCACCAACTCGGAGTCGGGTTTTGAGTTTCAGACCTGGGGCGAAAACAGAAGAGTGCCGGTAGATTTAGATGGACTGAGGCTGGTTTCGTTTCTTCCTGATAATAATCAGTAGGTTATTAGCTCTTTAATAATGGGGAATTGTTTGTTTTATGTTGGTAGAATTTTGTGCATTGAAAAAGCTGATTTAAAACAGTTGGTTGTATTTAGA # Right flank : ACAAATGGACGTGGGAAGAGCAAGAAGATTACGTGTTCCCCCGTACTTACGGAAACAAAACCAACCTAACCATGCCGCAATAGCTGACAATGCTCTCTCCTCCGCAGCATCAGCAATAAACAATTCCCTGTTCCCTTATTTCCCCACCTTCTTATTCCCATTGGCGCCTTTCGCCGTTCCTGCCAGCTCCCGCACCAGCGGCAGCATCACGTTGACCACTTCGCGTCCGCGCAGGTCGATGCGCCCCGGCAGCGCTTTGTCGAGGTACTGCTGATTATCAAGGCGCGGGTCGTGCCAGCTGGTGCCCTCGGGGAAGGTGCGGGACTTGGTCCGCTGCTGGTAGCCGTCTTTCTTGCCCAGCGACCAGTTGGTGGCCTCGACGGACAGCACCGGGATGCCGGCGCTGTCGAAAACGTCGGCGTCGCTGCAGCAGGCGGTGCCTTTGGGATAGGCGGCGTTAAGGCCGGGGTTGGAGGCGGCCGGTACGCCCCAGCGGTGGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 5200548-5199421 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR699009.1 Pluralibacter gergoviae isolate MGYG-HGUT-02520 chromosome 1 Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5200547 29 100.0 32 ............................. GCGACGACTGGAACGTCATGTCATTCAGCTTC 5200486 29 100.0 32 ............................. AACCTTGGCAACCAACTGGTCGCGATCGCTGA 5200425 29 100.0 32 ............................. AACCTTGGCAACCAACTGGTCGCGATCGCTGA 5200364 29 100.0 32 ............................. GGGTCCGACACCTACGAGGAATTGACCAACGG 5200303 29 100.0 32 ............................. CAGCCTGTTAGCACGGACGTCGTCCAGCGCCA 5200242 29 100.0 32 ............................. CGCCTGGACGACGTTTTCAGCCAGCTTCCCGC 5200181 29 100.0 32 ............................. CGTGGCCGTATTACTGGCCGGTCCAGATACAG 5200120 29 100.0 32 ............................. TCTCATTTAGGCGGGGATGCCGCGTATCATCG 5200059 29 100.0 32 ............................. GTTGTGGGCAGCCACAGACGCCTGCAGAGAAA 5199998 29 100.0 32 ............................. AGGTTGCTGACCTCGGCGTTGATGCATCTGCT 5199937 29 100.0 32 ............................. TAAGCCGCTGCGACGTGTGCGTTGAGGGCACC 5199876 29 100.0 32 ............................. GCAGTGGACCTGAATATAACGGGTATTACCAA 5199815 29 100.0 32 ............................. ATCCGTACCAATCAGCTAGCTACCGTCAGGGA 5199754 29 100.0 32 ............................. CTCTCTGCGGGATTTGGCATCAGCACCGAATT 5199693 29 100.0 32 ............................. CCAGTTGGCAGCGGCTCTTCCTCGCCACATGA 5199632 29 100.0 32 ............................. CAGACAACGCTTCGCCGGAAGAAACGCAGGAA 5199571 29 100.0 32 ............................. GTGCTGGCCAGACTGACGGTAATGAGCTTGCA 5199510 29 100.0 32 ............................. CGCGTAGCCCACTATCGCAACGGCCGCCCTGG 5199449 29 93.1 0 .............T....A.......... | ========== ====== ====== ====== ============================= ================================ ================== 19 29 99.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGTACCTGCAAAAGCACGGCCTTAAGTACCACCCGCTGTGGGACGAAGGCTACCTCTCCGTCGGCGATACCCACACTACCCGCAAGTGGGAGCCGGGCATGGCGGAAGAGGAGACGCGCTTCTTCGGACTCAAGCGCGAGTGCGGGTTGCACGAAGGGTAAGGGCAGAGGCTGGCTCAACCTGGCGCAAACTATCTCAATATTTTTAATCATTGAGATAGTTTGTTACGGCATCCGATCCTGGCGGTGCTATTACCGAACGTCAAATCTTCAGAACAAAGTTGTGCTAATACCTTACGCCGGGGTCTTACCTTCCTGAGCGCTCCCTCAGCGTTATCCCGGGATATTTATGGGCTACTTTCCGTAGAATGCGATCCAGGTAAAAGACTTCCTATAACGCTCTAATAAAATCAATTAGTTACTGCTCTTTACTAATCTGGAAAAGTTGGTAGATATTTTCTTTCAAAAAAAACTATTATTATTCATGCGGTTGCTTTTAGA # Right flank : ATAGCATTGGCTGTTCCATGTTTGTGCGCTATGATTATGCACATAAACTATGCGCAGGAGGTTATGATGAGAACGAATGTTGCCGAAAAAAAACGGAGTACAAACCTGTACTTAAATGCTGGACTGCTTGAAGAGGCCAAACAACTCGATCTGAACATTTCCGCGATAACTAACCATGCGCTGGAAATGGCCGTCATAGCACGTAGGCGCGAACGCTGGATCGAGGAAAACCGCGCGGGTATTGAGGCGTTAAACGGCTTTGTAGAAGAAACGGGTATTTTTTCCGATGATGAAAATTTCGGGGTAATTTAGTGAAACAGTTTGCAGTTTATAAAAATAAATTCCGAAATAAACAGGCATACCCGTATTTCATTGATGTGCAGACAGATATGCTAGCGCATCTCAATACTCGCCTGGTTATGCCGCTAACTAAGAAAGATAATTCTAATTCGCAGGTAAAAGCATTAACACCGGTGATTAAAATCGACCAGATTGAGTAT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //