Array 1 27092-26001 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSLO01000001.1 Staphylococcus pseudintermedius strain GL001B NODE_1_length_192339_cov_83.665838, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 27091 36 100.0 30 .................................... TCTGTGCTTTCTTGTTAAACAACTCTTGCT 27025 36 100.0 29 .................................... GATAAAAATATTAAAAAGGTGGAGTTTGA 26960 36 100.0 29 .................................... CTGCGCCTAATTTTTCAATTTTAACTATC 26895 36 100.0 30 .................................... TGATAAGGAGTTTAATAATTGATTGCTTAC 26829 36 100.0 30 .................................... GATGGAAAATTGCTGAAAGAGAAATCTTTG 26763 36 100.0 30 .................................... GCAAATTTTGGTTTTAGCACGATACCATTT 26697 36 100.0 31 .................................... TTGAATTTTTAAAGCAATTAGCGTGAGAGTT 26630 36 100.0 31 .................................... ACCTAGCTATACTTAACAAGTTATCAACATC 26563 36 100.0 30 .................................... TGTTAATTGCAGTAAATAAATCGTATTTCA 26497 36 100.0 31 .................................... TTTAATTTGTTAAGAAGAGGTTAAATCACTG 26430 36 100.0 29 .................................... GTGGCCAAAACGGTCAGTCAGCCGAAGCA 26365 36 100.0 29 .................................... TAAAATCAGAAACGAAAGGGCAAGCAGTA 26300 36 100.0 30 .................................... CTCAAGTGGTGCGTTGATGGTTATCTTGAA 26234 36 100.0 31 .................................... AACAAAGAGAGAAGTCCCCCGCGCAAAATGA 26167 36 100.0 29 .................................... CACATTGCGTGAACAAATCGAGGGCGTTA 26102 36 100.0 30 .................................... GATGGGAATCCATTTGCAACTGACAGGCGC 26036 36 80.6 0 ..........................AC.TC.TC.A | ========== ====== ====== ====== ==================================== =============================== ================== 17 36 98.9 30 GTTTTAGCACTATGTTTATTTAGAAAGAAGTAAAAC # Left flank : TTTTAATTATATTATTTCCGGAATCACATCTTGGCATACACGATATTAAAAAGTTTATACACCTTATAAAGAGATATAAATTTACCACGATTATTTTCACTAATCATCCTTCTATCATTATTAACGAGGAAAACATATTTCTTTGTAAAAGTAATAAGAAGTGCCACGACATCGAAAAAATATATGAAGAATTAATGTTATTTGTTCCTGAAGAAGTAGTGAGTCATCAATTAGTTAACATGATTGCATATCACGAATTCGTTGGTGAAAACCTTTCCGAGTATGAGCGATATTTTAAGTTTATCAATCATTACAATTAGGCTATACTATATTTAACATTATATGATAGAGAAAAGTTGATCCAACGATGAAGTAATGACTATGTGACTTCATTCGTGATGAAGAGGGTTAACTTTATCATCGAGTATCATATCTGACTTCTTTTGATAGTGCTAAGCCTCAATTTTGAAAAGGATTGAGTTAATGTTTTTGGATTTGAG # Right flank : CCTTCTTTATAATCGTACATCAACCTCACTATGCTTTCAAAATAATTAAGAGGCATTGTGGGCTTTTTGTGTTTATACGAAATGTTGTATGAATCTCTCAATCGTGCCACCATGTTATAATAGGTATAAATTGTTCATAAAAGATAAATAGAAAGCAGGGGAAATCTATGGAAGCAATTATTGCAACTCAACCGTTCCAATTAGCAGAAGGTCAAAAGTTTGAAAAAGTATCGCGTGAGCTCCCAACACCAGAGGCGCATGATATTTTAATCAAAGTGTACGCAACAGGGATCAATCCGGTTGATACGAAAATGCGGCAAGCCCCGTTAAATGCTGAGGCACGTGTCCTAGGTTTTGATGCGGCAGGTGTGGTTGAAGCGGTCGGCGATGCGGTTACGGATTTCAAACCGGGTGACCGAGTATATTATTCAGGATCGAATCAACGAGATGGCTCAAATCAGACGTATCAGCTCGTGAATGAAAATTATTTAGCGCATATG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGCACTATGTTTATTTAGAAAGAAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: R [matched GTTTTAGCACTATGTTTATTTAGAAAGAAGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //