Array 1 514798-514104 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CUEO01000001.1 Staphylococcus haemolyticus strain 2263-3461, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    514797	    36	 100.0	    30	....................................	ACGAATAACACAATATATAGTATTAACAGC	
    514731	    36	 100.0	    30	....................................	GCAACTTCTTCGAGTTCATCAGATAATTCA	
    514665	    36	 100.0	    30	....................................	TGCGACTATTTGCTATGATAAAACAGGCGT	
    514599	    36	 100.0	    30	....................................	AATTTTCGTTTTGTAATACGTCCCTGTTTA	
    514533	    36	 100.0	    30	....................................	ATATAATGGTTGAATCTTATCGTGGTAATA	
    514467	    36	 100.0	    30	....................................	AATTTGCGAAACGATATTGTGACAATCAAT	
    514401	    36	 100.0	    30	....................................	ACAGAAATATTTATGAAATACTTTTTAACT	
    514335	    36	 100.0	    30	....................................	TAATGATTATTGCAGAATTACAAACGTTGT	
    514269	    36	 100.0	    29	....................................	TTAGCATCATCATTCATCTTTTTAGTTAC 	
    514204	    35	  94.4	    30	....................-.......C.......	GTTTTTTTAGGGGACATAGGGGGGTGACTG	
    514139	    36	  72.2	     0	T................C......C.C..A.ATTTA	|                             	
==========	======	======	======	====================================	==============================	==================
        11	    36	  97.0	    30	GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAGAC	                              	       

# Left flank :   TCGATACAAATATAATTGTATTAACAGGATCATTACATTTTCTATCTGAAGAGTGGAAATACAATAACTATATTAGAGATGGGAAACAAAAAAACACATCTGAATTTCTAGAAGAATTAGAGTGGAACGCGCCACTTGATTTTGATAAGAAGGATCTAGAAGAAAGTTTGAACCGATTCATTTTAACTTATCAAGATAAATTAGAATTATATCCCATAATATCAAACTATCAAATAGCACAAATTATGTTATTTAATGCCATAGATATATATGTTGGGATTTCATATATGCAACATTGTAATCATAAATTTAAATTAAAAATCAAAAGTGAATTGCTGCCTAAAAGCATCAATAAATATTTAAATCAACAATTGCTGAATTAATTACTTTGCTATAATTAACTTAATAAATTATTATTATCTTAGTGAAGGAGTTTAGCTAACTTGTTCACTAAGATACCTTTTTTGAACTAATTCTTTTAGCGAGTAATATTGCTAGAG
# Right flank :  AATTAATGATTACTAAGTGCTGTTACTTGCTTACTTTTATTATCATGATCAATCAATTGATCAAAAGTATAGAAATATTTAAATTTAATAAAAATATTAGTTGACTAAGCATCCATGATAGCAATATAATTAATTTATAGAACAAGTTTAGCTAACTTGTACTTATACCTAAAATTACAGAATCTACTAAAACAAGACTTTATGTCGTGTTTATCCCATTAATTTATTAATGGGATTTTTTCTTTTTAATTAGACAAATCGCCAACGATGATGACTATCGTTGGCGATTATTTTTGTTTAATGTCATTTAATTACACATTATCATCAGTAATTTGACCAATCCAATAACTAGCTGCAAATCCAATGATTAAAGTGATGATTGAAAGTGTCCACTCGATACCAGTTTGAGGAAGACCAGGGAATACAGCATATATGGAGCCAATTACGAATCCAGTTATTAATGCGAATGTGGTATAGAAGTGATGATGTAGGAAGTATTT

# Questionable array : NO	 Score: 6.11
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAGAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-3.60] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [12-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [75.0-70.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
//