Array 1 56098-57913 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHMA01000004.1 Limosilactobacillus fermentum strain D12 ID965-D12_contig_23, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 56098 36 100.0 30 .................................... GTCTCGGTCGTAACGACGCCAGCATATCCG 56164 36 100.0 30 .................................... CATTTCTCTCACCTCTTTTGGTATGATTTA 56230 36 100.0 30 .................................... GCACGGCCTTTAAATCATCAATCGTTACCG 56296 36 100.0 31 .................................... CGAATAAACATTGTTTGAATAAGGATCGCGG 56363 36 100.0 30 .................................... ACCACCAAAGGGAAGATGGCGGTGGCGTAT 56429 36 100.0 30 .................................... TTGGCCGGGATGAATCAAGTTGGCGTTGGA 56495 36 100.0 30 .................................... TGCTGTTAGGTCGTCCCGTGCTTCATTGAT 56561 36 100.0 30 .................................... GCGTCAGCTAGTGCGTCAATCTCAAGCGCT 56627 36 100.0 30 .................................... TTGCATCGCATGATTTCAATAATAACTATC 56693 36 100.0 30 .................................... TGGAATCCGTTGATCATTAGAATCCTGGCT 56759 36 100.0 32 .................................... AGAATGGCTTCAATTTGTTCTTCAAATGACAT 56827 36 100.0 30 .................................... CGGGTGGCCAGCGGCCGCATTACTATCCCA 56893 36 100.0 30 .................................... TGTGAGTTCAGCTAGCTCATCATCAGTTAG 56959 36 100.0 30 .................................... GGTAAAAATATGACTTCTATGCACGTCAAT 57025 36 100.0 30 .................................... AATATCATTAAGATCAAGGCAACTGGTAAC 57091 36 100.0 30 .................................... AACCAAAACCGGATCCGCCCGTTCTTGACG 57157 36 100.0 30 .................................... CCAGTTATCAGTATATTTAGGTAAACTACT 57223 36 100.0 30 .................................... ATATCATTTCGAGTAAAGCCAAGCCAGTGG 57289 36 100.0 30 .................................... TGGAGAAGGATAAATTGAGCGCTGCTTATT 57355 36 100.0 30 .................................... AACGCCTTCGGGATCGCCAGTCCAGCGAGC 57421 36 100.0 30 .................................... GTGATGTGTGACCTCCTTTAAGAATACTTA 57487 36 100.0 30 .................................... AACAATCTTGCGCCAAGTTTCACCAGCCAA 57553 36 100.0 30 .................................... TGCCGGCGATGAAGTATATATATCTCTATC 57619 36 100.0 30 .................................... CAGTCGGCGAACTGACCGACCGTAGTGCCA 57685 36 100.0 30 .................................... ACGGTTGCGACCAACTATACAAGGATGATA 57751 36 100.0 26 .................................... CCTTGCTTGTCTTGCATGCTTAGCGT 57813 36 100.0 30 .................................... CATTTGAGGTCGACCTTATCCATCATCTGT 57879 35 86.1 0 ..........................-..TT..A.T | ========== ====== ====== ====== ==================================== ================================ ================== 28 36 99.5 30 GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC # Left flank : TAATCCAACCAAGCTTGATAGCTACCAAACAGCACTTGATAAGATGATTGTCAAAAATCTTAGCATTCAGAAACGAGATCGGATGAATGACCTTGCTCGTGAGGTGTTCTCAGAGATGCAAGATTCTTTGTTCGAATTCGACTTACCGTTGGAGGTGCGGTATGACGAGAGCCTCTTGAGATTATACAAATATGCGAAAATTAAATATTTGACGCAAGTAATAAGGCAACCTTATGGTATAATTGAAACCGATCTAAAATTACATCTCGAATTAAAAGACTGTCAGGTTCTTGGGTATTGTAATGTCGCTAATTACTTATTGCCTGAGCAGATACAGGAATTCGCTACTCTTGTTGAGAAAACCGAATTGGCAGTTTTATTAGTGGAATTCTCAGAAAAGAGAGAAACTCTACAACAACTCAAACAGGATATTTACCGGATTGATCGGGACTTCGTGGACTGGCACGAATAGATCGTTAGTTTTTGATGAGAAAATAACG # Right flank : TTATAGACTAAGGGCGTTGCTGTTTTTAGCAATGCCTTTTTTAGAAGTGATGAGGGAAAGGTAAATGTTTTCACGTTGGTAATCTGACGGGAACTTTAGCGGGCGATGTGCTAGGATAGGGCCAAAATGATTGGAAGTGTTTACCATGCAAATTGATCCCGAACGGATTCGCCCCGAACTGCACCGGATCGGCAAGGTGGGGTACGCGATCAACCTGATGGCCAGCCCGCACGCCTGCAACGAATGGGACGAATAACGGCGAAGGCGAAATGCCCATTCACTCGCGGCGGGTGATCAAACAAGACGTTTGGATTGAACGCCCTGACCATAGCAAGCTTCGGCTGGCTATTTTCCGGGCCAAGCAAGTTGCTACCAAGCGCCCGGCCACCGGGATCCTCTGGTTGCACGGGGGAGGCTACGCCTTGGAAACCGCCGAAAATGCCTTGGTTTATGCTGAACAGTTGGTGGCTGACGGACGGTCCGTGATGGTGGCGCCGGAT # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.60,-1.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //