Array 1 246668-249542 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFRN010000003.1 Lactobacillus sp. W8174 NODE_3_length_284839_cov_320.655116, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 246668 36 100.0 30 .................................... TTAGCAGATACTTAAATTGTTCTTTAGTGA 246734 36 100.0 30 .................................... AAGGTAGGTTGTCTCGCTGGGAAAATAATA 246800 36 100.0 30 .................................... AAGTTTACATGGGAGTTATGCGCAATATTG 246866 36 100.0 30 .................................... AATAGTATTGCTCCCACAACACACATACTC 246932 36 100.0 30 .................................... TTTCCATTTCTTTTCTAAATGTTTCTTTAT 246998 36 100.0 30 .................................... TCAAAAACCCACAAACAGGCACAATGTTTA 247064 36 100.0 30 .................................... CAGCACTTAAGCTACCTCTTCTTTGTTTAG 247130 36 100.0 30 .................................... ACATCTGGGTTTGCGGATTATCACCATCAA 247196 36 100.0 30 .................................... CTAAAAAGCCGCCTAAAAAGTTCTGGTCAT 247262 36 100.0 30 .................................... GAAGCATGGTTTAGCATTAGCACACCGTCA 247328 36 100.0 30 .................................... CGATAATTAGATATTATGTTGATCGGTTAG 247394 36 100.0 30 .................................... CAGCTGAAGGAATGATTGAGAAAGCTTACC 247460 36 100.0 30 .................................... CCAAAATTAGAGCTATTGATCGATTTGATG 247526 36 100.0 30 .................................... TTGTGTTAATAATGAAAAAATATCAGAGTT 247592 36 100.0 30 .................................... TTTTCGGAGCCGTTGTCAGTTTCTTAAATA 247658 36 100.0 30 .................................... TAACTGGCCAGAAGTTTTCTTTGTGTACCT 247724 36 100.0 30 .................................... CTTTACGCTAATAAATAGAGGCAAAGCAAA 247790 36 100.0 30 .................................... TATAATAGCGCCCTACCGTACCTTTCTTGC 247856 36 100.0 30 .................................... TTAACATATTTAGGTATAACTTATCTGGCA 247922 36 100.0 30 .................................... GATCAATTAAGTTTGGAGTATGTACAATGA 247988 36 100.0 30 .................................... ACTTGTTTTAATTGATATTCTTCTTCTTCA 248054 36 100.0 30 .................................... ATAATCGTGTGAGATTGCAACAAGACGCAG 248120 36 100.0 30 .................................... CTATAATATCATGCTCGTAATGATCAATAA 248186 36 100.0 30 .................................... GCCAAACGTAAAGCTAGGTCTAAACATATA 248252 36 100.0 30 .................................... AATAATAATATTGAATGTTTTAGTGACATT 248318 36 100.0 30 .................................... ACTATAATGAAGAAGAAAATTATGACCTAA 248384 36 100.0 30 .................................... AGCTACAACCATTACCGCAACTAATTTTTT 248450 36 100.0 30 .................................... GCGCAGGTGCTATTATGGGTAAAATGACTG 248516 36 100.0 30 .................................... TGGAAGTATTAGGAAATGCTGCGATATCCT 248582 36 100.0 30 .................................... TGAAACATTAAGAGCTCGAGTAATTTACGA 248648 36 100.0 31 .................................... TTAAGAAAAACATTGCACAGACGGACATGGT 248715 36 100.0 30 .................................... AATACTTTGCACAAAGTGCGTTAGCTACTA 248781 36 100.0 30 .................................... TGCAGGCTAATCAAAACTCACCTTTTCAAA 248847 36 100.0 30 .................................... TCAGTAACTGTATATAATAAAGATTATGAA 248913 36 100.0 30 .................................... AATTCCCGGTTAGGAATAAACTTCTGCCCT 248979 36 100.0 30 .................................... TCAAAAATGAACAATTTAGAAACCATTTTA 249045 36 100.0 30 .................................... AAACCTGAAACCTGTGTTAACATTTTCCAC 249111 36 100.0 30 .................................... TTGAACTTAGTGAATAATTTAGTTTTTGTA 249177 36 100.0 30 .................................... TGAATGATTTATCGGAAACATTAGCTCACA 249243 36 100.0 30 .................................... GCGAGCGCGGCTATCATATCTATGACAACT 249309 36 100.0 30 .................................... ATATAATCCAATCGACCCAGACAACATCAC 249375 36 100.0 30 .................................... ACTTACTTATTGTTTTCAAACTCATCATCA 249441 36 100.0 30 .................................... AAACATGACTTTGAAAAATTGGTTTACCTT 249507 36 88.9 0 ....................T...AG........G. | ========== ====== ====== ====== ==================================== =============================== ================== 44 36 99.7 30 GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC # Left flank : AGTGGTGATATTACCAAAAAGTATATGCCTCATATTGTAAGTAGTTACCTAAAAAATTTAGATGAAGAGAATCGTAATAAGGTGATGAAGTCTTTTTATAATCTAGAGTCAACCTTGCAGGACTCACTTTTACTTGAAGATTTACCCTTAGCAATTAATTTTGATGAAGACTTAAAAAAACTACTTAAGTTCACGGAAATTCATTTTGATAAATCAATGTTGTTTAGTATATATGGTACAATAGAAACAGTTTTAAAAATTCACCAGATGTGTAATTTAAAATCTGTTCCTGTTATCTGTAATGTAGCTCATTACTTGGAAGAACAGGAGTGGCAAGAGTTAGCTAGTCTTGTTACGGAAATGAATTTAATTTTGATTGTAATTGAATTCACGACGAAAGAAAATTTGGCAATATCTAAAGACATACCTTTTTATTATATTGATAAAGATCTAATCGATTGGTACTAGCAACAATATTAAAATCAGATTATAAAACATCG # Right flank : CATAATTAATTGGGTTAAGGAAAGAGCAATTTAAAATGAAAAAGTCAGTCAAATTAAAGAAATAAGGCAATTCTAGGGCGGCTATTATTCCTAGAAAAGTGCTGAAAGAAATAAACCCAGATGAGCTATTTACAGAGTTTGCAATAGACTTCGATAAAGATAAGCAGTCTATTACGCTAAAAAATTGAAAGCCAAATATAATTTCTTTAATAAAGTAATTGCGCAATATATTACGTTACTATAACAAAGAAAGAATTAAGGAAAAACTGAATGACTGAGTCCGAGAGAATATCTAGCTCATGCCTTAAAGAAATGACATTGACTTTTGGTTACTCAGTACATACTACTTTTAATACTTTAAGAAATTGACACTAATAAAGAAGGGTTACTATTTGTTCAAATGCAAAACATACTAAAAAGTAACAACAACAAACTATACCTTTTGTCAGTGATCACCGATAACTTGGGCAGCTCTTTAATGTCATTTGCATTGCCGTTGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.90,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //