Array 1 56905-55825 **** Predicted by CRISPRDetect 2.4 *** >NZ_FWYE01000004.1 Picrophilus oshimae DSM 9789, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================================== ================== 56904 28 100.0 48 ............................ CCACACCAGCAATTCCAAGACCGATAATCCCCAGAAATAAGAGGAATA 56828 28 100.0 37 ............................ TTTAAAATGTACTTGCTCATTTTTTCTCACTCCTTAA 56763 28 100.0 42 ............................ TCATTTATCATTTTTGAAATAGATTTTCTATAGTCTAATAAA 56693 28 100.0 46 ............................ CCATGATATATACTGTAACTCTATGATTACATACTGGCTACCTATT 56619 28 100.0 48 ............................ CCATCGTTATTCCCATTACATCTATTACGATATCGCCGACAAATTCTT 56543 28 100.0 41 ............................ TTTGAAAAGATATAAGATTGAAATAGGAAGTCAGTATATAA 56474 28 100.0 40 ............................ CTCTATTATTTCTAATATTTTCTCTTTTTCCATTTTACCA 56406 28 100.0 42 ............................ TTTTTTTATTTCCATTTCCATTTTTTACCACCTAACCAACTA 56336 28 100.0 46 ............................ TCATGCATCCTCCAGCCCCTGAAAACTGGTAGTATCTCAATTTTAA 56262 28 100.0 35 ............................ TAGAAACCCCTCTATACTCCTGAAAATAAGGTACA 56199 28 100.0 50 ............................ TGGGAGATCATCTTTAAGCCATTTTAAATCATTCCTTTCTTTTTCGGTTG 56121 28 100.0 38 ............................ AGGAGGATACCACTCATCATCCCACGCAACAACGTCAA 56055 28 100.0 38 ............................ CTTAAAGAAAGGGTCAGAAACGACGTCTATTTTTAAGA 55989 28 100.0 43 ............................ CTGTTCCTCAAAAATTTATTTTGCCTGCTACTGTAGTTTACTC 55918 28 96.4 38 ...................T........ GAATATAATTTGTATATACCGGATATTTTCACTTTTTT 55852 28 92.9 0 ..........................GT | ========== ====== ====== ====== ============================ ================================================== ================== 16 28 99.3 42 GTTTAAGAATTACTAGATAGTATGGAAG # Left flank : ATGATGATAAAAATAAAAATTCAATTATATATGAAAATAATAAAACAGAAATAGAAAAAATTTTTTATCCTGATTTAAACGACGTTTATTTTTTAAAGGTTCCAATAGTCAGAATACCTCCAGATGAAATAAATAAATTAAAAATGGCATTAAACTCAAAATTTATAGAGGATTCAACATTAGAGGATTTTAGATTAAAGGCCTATAGGGATTCAGGATTTTTAACATATGATAAAACCAGAATATATAACACAAGGCTGGGTGATATAATAAAAGAATTTTTGCAGTAAACCTTAAATAATGTAATAATTTTTTTAACAAAATATTTAAATAACGGTGTACCTTTAAATACTCCAGGCAAAAAAACGGTTGACCGGAAATTTAAAACATATACAGTAATTTATTGAATTTTAATACAATTTTTACAGTTTTTAAGTAATTTATAAAAATTGGGAGAAGAACTTTTATATATCCATCTTACATTATTTTTTTAGTAACGG # Right flank : GTTTTTCCCTCCCTGATAGCTTTAATTTTCAATTCTGTTTAAGAATTCAAATAAACGTTAGAATTGTTTTTATGCCTTGCCATAAATTGATGGATTGATTTCCTTGGATATAGTTCCATCATCACTGAATTATCAAAGGCAATGTTCTCTAATTTTATCATAAATCTGGATTGCAATGTTTATCATACCATCGAAGTTCAATTTTTGATGCTATGCATTATTTTACTGCAGCAGCCATGGCAATGATAATTAAAGAATGACCAGTATAAAGTATTATATAAAATGCTATGTTTTCTACTTATGTCCAAAATTGATAATATTGAAAATGAAATAGAGCAATGCAGAAGAACTTCAATGGATAATAAAACTGTTACATATGATCTAAGCAACATAAATTTTTCTGACATAAAGAAAACAACCAAAGCACTTGCCAGGGTTTTATTTGATAATGATATAAATAAATGGATATCAAAAAGTGGCAAAAATTTAACTGTAACACC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAGAATTACTAGATAGTATGGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //