Array 1 37-364 **** Predicted by CRISPRDetect 2.4 *** >NZ_LFLL01000032.1 Campylobacter fetus subsp. testudinum strain 12S02263-3 contig00032, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 37 29 100.0 37 ............................. CTTTGAGGATATCGAACTTATGCAATACACCGGGCAT 103 29 100.0 37 ............................. CACGAAATTTCCGTTGATATAAAAAATAAGTTTAATG 169 29 82.8 5 ..................A..ATA.C... TTTAA Deletion [203] 203 29 100.0 37 ............................. TATATTATAAATAGGCAGAAACAAGAATTAGAGAGCT 269 29 93.1 38 ......................A..A... TAGCTTTTTTGAAAGCTGTTTCTACTGCTAAAGTAACA 336 29 75.9 0 .......G..A....AGC....A..A... | ========== ====== ====== ====== ============================= ====================================== ================== 6 29 92.0 31 GTTTGCTAATGACAATATTTGTGTTGAAA # Left flank : CTCTATATATACTTTGACATTTCTACTTTTAGCTGGG # Right flank : ATCATATAGAGCTCCAAAGTAGCAACATTCAAAACGCTAAAAATGTAAATGAGAAAAAAGCAGCTTCTGCGTGGAGAAGTGAGCCTTTTTATGGTAAAATACTTCCAGCAAACTTTGGGCTTCCGCCGTATCATTTTCGTTGCAGAACTGAGCTAGTACCAGTATGGATAGATGAAGAAGAGATCGACGGTGTAAAGATGAAAAATACAAGCCCATTAAGCAAAGATGAAGCAGTTAAGCACATAGACAAAACTGGAGTGGAGAGAGTTTGGAAAAAGAGCAATACACATATTTATGAAAAGCACGACACCGAGCCAAAGGATGTTGTAAAGGCTTTAAACTCTATAAATACAATGGCTAAAAATAAGGATAACAAATATATAAACGCCTTTAGTGATAATGGGTATTTTATAGTTTTTAATGGCAATGAGATAGTGACTTGTTATAAGCCTAGCCAAAATAAAAAAGAGGCATTTGGTTACTTTAAAAATGCTTCAATA # Questionable array : NO Score: 5.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.60, 5:0, 6:0.25, 7:-0.57, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGCTAATGACAATATTTGTGTTGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.41%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 247544-246848 **** Predicted by CRISPRDetect 2.4 *** >NZ_LFLL01000001.1 Campylobacter fetus subsp. testudinum strain 12S02263-3 contig00001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 247543 30 100.0 36 .............................. TATTACTAGTTATATGGCTTGTATATCTGCTTCCTA 247477 30 100.0 37 .............................. TAGCGTCTAAATTCGAAGCAAACATTATTTATCCTTT 247410 30 100.0 35 .............................. ATATCTTGATATGAATTTGGTAGTGGAACTCCGCA 247345 30 100.0 37 .............................. ATTTTATCGATATTCCGAATGGCACATACCGTGGCGC 247278 30 100.0 35 .............................. ACTACAGGTACATTAGATATTTTTAAATCTAATGT 247213 30 100.0 36 .............................. ATTTCTGGGGTCATACTCTCTCCGTCTGCGATAACT 247147 30 100.0 36 .............................. TTTGTAAGCTTGTTTAACTCTGTAGATGCAAATCCA 247081 30 100.0 41 .............................. TTTGCGTTTTCGACCATGGCGATTAGTCTATCTGTATCTCG 247010 30 96.7 35 ...............G.............. TAACTTCGTCTCTTGCATATCCTGCAAAAAACATA 246945 30 90.0 38 ......................A..A...T AGCTTTTTTTGAAAGCTGTTTCTACTGCTAAAGTAACA 246877 30 76.7 0 ..........C....AGC....A..A...T | ========== ====== ====== ====== ============================== ========================================= ================== 11 30 96.7 37 GTTTGCTAATGACAATATTTGTGTTGAAAC # Left flank : GAAACTTAGTTAAGGAAGGCGCGAATGGCAAAAGTGTAA # Right flank : CACATAGAGCTCCAAAGTAGCAACATTCAAAACGCTAAAAATGTAAATGAGAAAAAAGCAGCTTCTGCGTGGAGAAGTGAGCCTTTTTATGGTAAAATACTTCCAGCAAACTTTGGGCTTCCGCCGTATCATTTTCGTTGCAGAACTGAGCTAGTACCAGTATGGATAGATGAAGAAGAGATCGACGGTGTAAAGATGAAAAATACAAGCCCATTAAGCAAAGATGAAGCAGTTAAGCACATAGACAAAACTGGAGTGGAAAGAGTGCTTAGTAAGCAAAACTATTTTGGTGAGAATAACCACTCTAAACCATTGTACAAAAGAGTTCCTAAAAGCGATGTTGTAAAGGCTTTAAACTCTATAAATACAATGGCTAAAAATAAGGATAATAAATATATAAACGCCTTTAGTGACAATGGGTATTTTATAGTTTTTAATGGCAATGAGATAGTGACTTGTTATAAACATAAAGATGGTAATAAAGCTACTTTTAATTATTT # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGCTAATGACAATATTTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 592-36 **** Predicted by CRISPRDetect 2.4 *** >NZ_LFLL01000035.1 Campylobacter fetus subsp. testudinum strain 12S02263-3 contig00035, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 591 30 100.0 35 .............................. TCTGCTATGGGCAAAAATATAGAAGACAATTTGTT 526 30 96.7 35 A............................. GTTTATCTAAATTTGACTTGTACTCATTTACTTTT 461 30 96.7 36 ........................T..... TTTGCAAATTCTCTATTTTTGGCATTATTCTAAAGT 395 30 100.0 36 .............................. TTCTCATACGACATCTGTTCCACAGCCTTTGTTTAT 329 30 100.0 36 .............................. ATAAAAAATGTTAGAAATAACAAATATACCTAGTTT 263 30 100.0 36 .............................. GTCTGTTACAACCTTAGCATCAGCAAGCGTTTCTGC 197 30 96.7 36 ..............C............... TAAAATTTATAAATTTCTGTTATCTCTTTTTGGCTT 131 30 93.3 36 ..............C....T.......... TGTGTGTAATGTTGCGGATAAATCTCGCATTCGTCG 65 30 96.7 0 ..............C............... | ========== ====== ====== ====== ============================== ==================================== ================== 9 30 97.8 36 GTTTCAACACAAATATTGTCATTAGCAAAC # Left flank : AAAAACTTTATAGAAACTTTGGTATAGTTGATTTCTAGCTTCATAAGTTTATGGTTTCTTTTTTGGCTATCTTTAACTCGTCGTCGTTTAGATGTTTTAGACTATCTAGTATCTCGTCGCTCTCTTTTTTATCGCAGTAACTAAGCGTAGTTAGCCTGTATGATAGCGAACCTTTGGTTTCTTTTAATTTTTGATCTAATGCATTTCTGATAAATTCAGCCATAGTTGTTTTGCTATTTTTTACGATTTGATTTAATTGTGCAAATGTGTCATCATCTAACTTCAAGCAGTAACTTTTCATAGTTTATCCTTTTTATTTTATTATATACTATATATACTTATATATATCTTATATAAATAACCTCTTGCCTAAGTTTTCAAAATTATATTTTTTACTATTTTAATTTACCATTTGAAAAATAGTTTAATAAATTTCAGCTTTTTTATAAAGTGTATTTTCAAGTTGGTTATTTAGAAGTGGTAGAATAGGCGTTCGACAA # Right flank : CGCGTACAATGGAACAAAGCTCAAGCCCCCTCATTG # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.81, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAACACAAATATTGTCATTAGCAAAC # Alternate repeat : GTTTCAACACAAATCTTGTCATTAGCAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 1 1749-144 **** Predicted by CRISPRDetect 2.4 *** >NZ_LFLL01000045.1 Campylobacter fetus subsp. testudinum strain 12S02263-3 contig00046, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1748 30 96.7 36 A............................. AAATGTCCCTTTTAACAAACTCGCGGTCATCCCAGA 1682 30 100.0 36 .............................. AGATATAAATCAAGCGAACAAAGTTCAAGAATTTAA 1616 30 100.0 36 .............................. AGAAAGCGATAGAGTGGAGATAGCTAAGCTAAAAGC 1550 30 100.0 34 .............................. AAGTAGTTTTATCTACTGCAAGTGCCTCATTTAA 1486 30 100.0 34 .............................. AAAGCCACTGCGCAGAGCTTGTAAGCCTTGCGGA 1422 30 100.0 37 .............................. TAAACAGGTTGGTTGATGAGCTTGGTGGGCTTGAGAG 1355 30 100.0 35 .............................. TGTGACTGGGCTTATAAAACGCTAAATAAAATAAA 1290 30 100.0 36 .............................. TCAAAGCTATCACCTTCGTGAAATAAAGAACACTGG 1224 30 100.0 36 .............................. AATAAGTTCGGAATAATTAGATTTAAAGCTATCTAA 1158 30 100.0 35 .............................. ATTTGAAAACGATATGCGAAAAAGAACTAGATTTA 1093 30 100.0 36 .............................. CATTGACGGTTCATTGGTGGTTATATTTAATAGGGG 1027 30 100.0 37 .............................. AAGCACAAGTAAAGCTTAAGACGGAGGAGTTTTCCAA 960 30 100.0 36 .............................. AGAGTGTTATTAGGGGTAATTGGTGGTGTAGTGTTT 894 30 96.7 35 ..............C............... TTATTTGATGTTATAAATGTACCTGTAGTTCAAAT 829 30 96.7 36 ..............C............... TTCCAATTTCAAATTTGCTTGTTTTAAATCTATACT 763 30 96.7 35 ..............C............... CAGAAAAGCGAGCGATAGGCTATTTTACGAGGCTA 698 30 96.7 36 ..............C............... GTTGCAATGGGGCTATTATAAACCCAGCCGATATTA 632 30 96.7 35 ..............C............... GATAATACTCATCTGCTACTGCATTTTGATTATTT 567 30 96.7 36 ..............C............... TGGTAAAGCCGTCCCTGCAAAATTTGCAAATAACAA 501 30 96.7 36 ..............C............... GTTCGATTTTAAAAAGCGTTTTACAAATAGAAGCAA 435 30 96.7 36 ..............C............... TATAGACAAGTTTGAGCAGATTATTAATGCTAAATT 369 30 96.7 35 ..............C............... GATAATACTCATCTGCTACTGCATTTTGATTATTT 304 30 96.7 36 ..............C............... TTATAGCGTCTCCAGCCTTTAAAAGTGCGTTTGCCA 238 30 96.7 35 ..............C............... TCATAATACTTCGCCCTAAACTCATCAGCTTCGAT 173 30 73.3 0 ..............C..TAT..A.T...TT | ========== ====== ====== ====== ============================== ===================================== ================== 25 30 97.3 36 GTTTCAACACAAATATTGTCATTAGCAAAC # Left flank : TCTCTTTGATAAATAAGGCTCTAGCTACTCCAA # Right flank : TCTGTACAAAAATGTTAAATAAGTTGCTAAAATCCCTTGCAAGGTCTGTACAAATCTATAGTCTTTAAAAAGATTTCTTGACAGTTTAGACCATAAAGGGGTTATTGGCTTGTTTGGGCTATTTTGGTTAAAAACTTAGTCTTT # Questionable array : NO Score: 5.85 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.73, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAACACAAATATTGTCATTAGCAAAC # Alternate repeat : GTTTCAACACAAATCTTGTCATTAGCAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 42-863 **** Predicted by CRISPRDetect 2.4 *** >NZ_LFLL01000049.1 Campylobacter fetus subsp. testudinum strain 12S02263-3 contig00050, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 42 30 100.0 36 .............................. TCGATAAGTCTGATTTTTTAAGCAAGGTAACTTTGG 108 30 100.0 36 .............................. AGCTGTAAATGAGCAATATAAGCAAGTAACCGCACT 174 30 100.0 37 .............................. GTTTGCTAAGTTTGCAATGGTTGTAACGCTGCTTCCA 241 30 100.0 36 .............................. AAGCGACTACCTAGCTTTGTAAAGGAGTAAAAAAAT 307 30 100.0 36 .............................. ATCACATTTTTAGATATATCAGAACTAGCAGTAATG 373 30 100.0 36 .............................. GCATTGATATTAAAAAAATGTGGAGATAAATATAGC 439 30 100.0 36 .............................. TAGAATTTTATTTTATACTCTCTTCCTTGCAAATCC 505 30 96.7 35 ...............G.............. TGATAAATTCCCTTGCTAATATCCCCTTCGTACTG 570 30 96.7 35 ...............G.............. TTTTTTTTCTCCTCTGGCAATCTTGCGCCGAGTTG 635 30 96.7 36 ...............G.............. TTTGCTGCAAGGTCGCTTCTGATCTCATTGTGCACT 701 30 96.7 37 ...............G.............. CAAGCAGCAGCGAGCTTTAAACAAGATCAAATAGATA 768 30 96.7 36 ...............G.............. CTCATATCTATGTATGTAAGTGGGTTGTACCGATGA 834 30 80.0 0 ..............G.T...AA...A...G | ========== ====== ====== ====== ============================== ===================================== ================== 13 30 97.2 36 GTTTGCTAATGACAATATTTGTGTTGAAAC # Left flank : GAAACCCGTCATCCACAAACACAGCTCCTGCGCTTGTATTTG # Right flank : TCAAGACTTTTTTAAGAAAAATAACAAATATAAGCAAAATTATTGTATATTTTTTAATAAAATATCAATC # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.96, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGCTAATGACAATATTTGTGTTGAAAC # Alternate repeat : GTTTGCTAATGACAAGATTTGTGTTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-86.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 1-358 **** Predicted by CRISPRDetect 2.4 *** >NZ_LFLL01000067.1 Campylobacter fetus subsp. testudinum strain 12S02263-3 contig00068, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1 28 93.3 34 --............................ CGAAAACGGCGAGAGACTTTTAACAAAGGCGGCG 63 30 100.0 36 .............................. TCCTGGCTTCCATTCCAAAAGACAACATTAGCCATT 129 30 100.0 36 .............................. AAAAAAGCTTTTCCAGCCTTTGGGCTCGTTCCGTTT 195 30 96.7 36 ...............G.............. AATAGTAATTTATCTAAGCCATAGTTATTTGCTATA 261 30 100.0 38 .............................. AGTCTGTTTATCTCGTTGACTTCTTCTATCTCTTTAGA 329 30 80.0 0 ..............G.T...AA...A...G | ========== ====== ====== ====== ============================== ====================================== ================== 6 30 95.0 36 GTTTGCTAATGACAATATTTGTGTTGAAAC # Left flank : | # Right flank : TCAAGACTTTTTTAAGAAAAATAACAAATATAAGCAAAATTATTGTATATTTTTTAATAAAATATCAATTTTACCTTTAATTTCTCTTAATAGCCTAAAACTTTCAGCAGCGTTTTTTTCGAAATCCTCCAAACGGTCAATGCGATTTTCAAGAATTCTTATCTTTTGATTTATTAACCAGTTTAAAGCTGTTAAAGCCAAGACCACTATAGTAGTCACAGGCTCTAAATAATTTAATATATCCATTACGGAGCTACAAC # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGCTAATGACAATATTTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 494-71 **** Predicted by CRISPRDetect 2.4 *** >NZ_LFLL01000072.1 Campylobacter fetus subsp. testudinum strain 12S02263-3 contig00073, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 493 30 100.0 36 .............................. AAATCGACGCTCCAAAAGGAATGCACGCTAAGCTAA 427 30 100.0 35 .............................. CCATTTAGCGCATCTTCGTTTATTTTTTTTATTTC 362 30 100.0 35 .............................. GGCTTTTAAAAGCCATTCCGTTATCGCCTATTATT 297 30 100.0 36 .............................. TCAAAAATATCAGAGAACGCTAACACTGGGCTTATA 231 30 100.0 35 .............................. TCAACAAGCCCTCTTATACCGCCATTTTCATAACG 166 30 100.0 36 .............................. TCTACGCAACCTTTCTTTTCGTTTTTCCCAGTCTCT 100 30 76.7 0 ..............GTT...AA...A...G | ========== ====== ====== ====== ============================== ==================================== ================== 7 30 96.7 36 GTTTGCTAATGACAAGATTTGTGTTGAAAC # Left flank : GATTTGTGTTGAAACGTTGCGAGGTCTAAGTTTATCTTTTTAGCAAAGAT # Right flank : GTCAAGACTTTTTTAAGAAAAATAACAAATATAAGCAAAATTACTGTATATTTTTTAATAAAATATCAATT # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGCTAATGACAAGATTTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [85.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //