Array 1 262930-262542 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NHOG01000009.1 Yersinia kristensenii strain CFSAN060538 CFSAN060538_contig_9, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
    262929	    28	 100.0	    32	............................	ACGGAACCATCCAGCTCTTTCCCGCTGGTGAA	
    262869	    28	 100.0	    32	............................	ATCCGAAACGTTTATAACAATCCGAATAACAT	
    262809	    28	 100.0	    32	............................	ATCCAATACCAATCGATATCCCCCTCTTCGTT	
    262749	    28	 100.0	    32	............................	AATACGAATAATGGCGTTAAATTGCCCTAACA	
    262689	    28	 100.0	    32	............................	AGATAGAAACCCAGCGCCAAGCTGTAGCAGCT	
    262629	    28	 100.0	    32	............................	CTCCGCACTGCTGGCATTCGAATCAAGGGAGA	
    262569	    28	 100.0	     0	............................	|                               	
==========	======	======	======	============================	================================	==================
         7	    28	 100.0	    32	GTTCACTGCCGCACAGGCAGCTTAGAAA	                                	       

# Left flank :   GGCTTTTTGGGCGATTAAACACAAACAAGCTTTACAAGCGGCGGAGCTCTGTTTATAGTTCGGCTCGTTGCGGAGGGGTGGCCGAGTGGCTGAAGGCAACGGTCTTGAAAACCGTCGACGGGTAACCGTTCGAGAGTTCGAATCTCTCCTCCTCCGCCATCATTTCTCCGTTTCTCCTGCGTATTATCCCTGTTTAATCTCCTGAAATACCTTAATTTTTATCCTGTGATATTTATTCTTTCCGATATAACAAAACGAGCAAAACCCACCCCAAAATAGTGAACTATAACTTTTTCAAACTCCCCTTTTGTTTGTCACATCATCCTCAGCAGAAAAGGCTTCATGACATTTTACCTTAATCTCAACTTGAACCCTTTTTTTAGAGTGTTTTTTAACTCGTTGATTTTATATGAAAATCACCAAGGTTTTAAAAAAATCATTTTTTATCACTGCGCTTCAATGCACTTTTATTATCAGTAAGTTATCTGTATTGTTCTACT
# Right flank :  TCTATCCGACGTCTTATTTCTCCTTTTTTGTTGAATACCTCTAAAGAGGTATATATTTGATTTTATGTAAAAATTGTTTGGTGCTGAGTTTTTTTTGAGCTGGTTCATAAAATCATATACCCACACAAAGAATGTTTGATCTAAAACAAGCATTGTTACTACAACAAATCATTTACTGAAAATCCTCCTTACTATCTCCATAACCCCACTGGGCGAAATCTGTCATGGGTATCTCTGGGTGAGTGTTTGACATCCTGGTGCGGGTTTAAAAATAAAAAATGACTGCCTGGTGCCAGCACCGGCGGCGTCCGGTATGGAAAAACACACTGGAGTATCTATTGTGAGCAAATTTATAAGACAAATGTCGGTAGGGATATTGGCGCTTTTGGTCATCGGAGGGGTGTTTTCTGTGTCGGCAGCACCTACGCCGCCGATTGAGGCCCGCAATGATAAGTTCGCGCAGCAGCATGTGGATCAATTCACCTCTTGGTTGAAAACCC

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGCACAGGCAGCTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [5,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.70,-8.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.24   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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