Array 1 16863-17025 **** Predicted by CRISPRDetect 2.4 *** >NZ_QLOE01000013.1 Methanothermobacter tenebrarum strain MCM B 1447 NODE_114_length_23439_cov_26.2138, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 16863 30 100.0 37 .............................. TGATTACAGCGGGTCAAGCGATCTGGAATTTTGTCAC 16930 30 100.0 36 .............................. TACTCATATAATTCTCTTAGATGTGAATCAGTCTCT 16996 30 96.7 0 ...........G.................. | ========== ====== ====== ====== ============================== ===================================== ================== 3 30 98.9 37 GTTAAAATCAGACCAAAATGGGATTGAAAT # Left flank : AAAGGTTGATTCTCAGATCGAACTTGCGGAAAAGATAAGGGCCGTGGATCAGCGGAGGGTAGTGGAGGGCGTTCTACTCTCACATTTTCTACCAGATATGATGGGGAACATTCGGGCATTCACAAAACAGAAGGTACGATGTACAAGATGCAACCGGAAATATAGGCGAATACCACTCACAGGAAAATGCAAATGTGGTGGAAACCTTGTACTAACAGTGTCAAAGGGGTCAGTTATAAAATATTTGGAAATATCAAAGGAACTAGCTGGAAAATATCCCATAGACCCCTATCTCATGCAGAGAATTAACATACTGGAATTTGGTGTGAACTCCCTATTTGAGAGTGACAGATCCAAACAAAGTTCACTGGACATATTCTTGTGATATTATCAGTTATAGGGGGGTTCTTATGAGGGGATACATTCATATCGTTAAATTTTTTCAATTTTTACTTGGTGAGTAGGGTGCATTTTCGTTATATCAGGGTTAAACGAAATAA # Right flank : TGGATTTAAATATTTCTATTTTATTTCAATCTGCGACAAGCTAAGAAGTCTACTGCATATTTTTTTCAATTCTGTTAACTTGCCAAAGCGACACAATATCGTTCAAATTTTGATACGCAATCACAAAATGCTCTTTCCGCTTTCACTATTTAATCTTGGATACATTGCATGACAAAAAAGCTTTATGACGGTTAAATAATTACAAAACCTTATGAATCATCGAATATCTATAACATTAGCGATTGGAACACTTTTAACTCCCAAAGGGTGTCTACCATATGTATAGCTGAAATGTATAATTGTTATAGTTTTTTGTGGCAGAGTTTATGTTATCTGCTTCTGACATGTCAGCATTTGAGGCTATCGTAATTGACTCGAGGCCATTGTATACTATTAGATTATATTTTATTCCTGGAAATTTTGAATTTAAAAATTCATTCGCTATCATATTAGCTTCTTTTATAGCTTCTTCACGGTTTTGGTAGGAGCTGAGTTCGTGG # Questionable array : NO Score: 8.31 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATCAGACCAAAATGGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.10,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 2997-47 **** Predicted by CRISPRDetect 2.4 *** >NZ_QLOE01000002.1 Methanothermobacter tenebrarum strain MCM B 1447 NODE_5_length_213373_cov_24.4462, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 2996 30 100.0 37 .............................. CCATCGATATACTATTTGAAGACTCATACTTCCTTGA 2929 30 100.0 35 .............................. TGTAAACTCCATCCCGGACTCTCCTCAAAGTTACA 2864 30 100.0 35 .............................. GTCACACTCAGGGGTGCGTTTCAAGTGTTGCAAGT 2799 30 100.0 36 .............................. GTTCGGCCACACCTGTGGGAATGTCTTCATCCACCC 2733 30 100.0 38 .............................. CGTTGTAAGGTTCTTGTCCAGGGCCTTGGATTTCCATG 2665 30 100.0 39 .............................. CACCAACAGAATCCTTCACCATCCAGGACCTAAGCGATT 2596 30 100.0 36 .............................. ATCTGAAGATGACATCGATGAACTATTGCTTGGAGG 2530 30 100.0 37 .............................. GCTTTAGAAGCTATCTGGGATGTTTTAGCATATTTGC 2463 30 100.0 36 .............................. TCACGCACTACAAAAGAATTCAAGCCCTGATACTCA 2397 30 100.0 38 .............................. CTGGGCTAATTGGCTCCTCTAATTTGAATTCTACGAGT 2329 30 100.0 38 .............................. TTGTTTTCCAACACTATCTTCATTTTGTATTTCTCAGT 2261 30 100.0 36 .............................. CGAGTTCTTTCAAGCCTTGTATGATCTCATTGCAGA 2195 30 100.0 37 .............................. GAGATTGGATCTAATGAGTTCTTCAATATCTTTTATT 2128 30 100.0 35 .............................. CTTTTTATGAGAACATCATCCCATGAAATCAAATT 2063 30 100.0 36 .............................. TAATATAACATGGAGGTGAAGAACATGGAGATAAGA 1997 30 100.0 37 .............................. CCAGTTGTGTAAACTGTGGCAACGGCGTTTTTGAATT 1930 30 100.0 36 .............................. GAGAAACCTTGAACTGATAAAGAAGCTCAAGGATGA 1864 30 100.0 37 .............................. GGTGGATTGGAAGGGGAAAGGTGGTGGTGTGACAAGA 1797 30 100.0 36 .............................. CATCATCTTATTTTAGAAGGATAAGATAGTAAACGG 1731 30 100.0 38 .............................. ACTTGTAGAAGTGGAGTTTAGGGATGTTGATGCCTCTG 1663 30 100.0 36 .............................. CTTAGTTGGAGTTCTTTGACCATTACTGCGAGGATT 1597 30 100.0 36 .............................. TTGTTTGATCAAAACGGCCACCAGTTGTGTAAACTG 1531 30 100.0 36 .............................. GACCACCCCGAAAACCACCCCAAGGCCCTGGGTTGG 1465 30 100.0 37 .............................. TCCTCACATTCTCTGGTAGAGTGTCAATGACATTCTC 1398 30 100.0 37 .............................. GGCCGTTAAGAAAGCCTCAGAGAAATGTGGAATTAAA 1331 30 100.0 38 .............................. CCAACTTCCTCTATCTTCGATTTAACACATTCATAAAC 1263 30 100.0 36 .............................. TGGTATTCTTCTATTTTGTCCAACCGTTTGTGTAGG 1197 30 100.0 35 .............................. GATGATGCATTACTCAGAAGATTGCACATAATTAA 1132 30 100.0 35 .............................. TAAAACGTATAGAAAAGGCGTGTGGGTTTGGGGTG 1067 30 100.0 36 .............................. TTGGGATTAGCACATCAAGGTGTGGTGCGAGTTTGG 1001 30 100.0 37 .............................. TTCTGGCGGTTCCATTCCAGCATCTGAGTAAAATCGT 934 30 100.0 36 .............................. TTATCTTCATCGCATATGCAAACGGTGCCAGCATGT 868 30 100.0 35 .............................. TTGGTTGGATCCGCTATCTTCACGAGGCCATTCTT 803 30 100.0 37 .............................. CTTTTAGTTTTTTTTCCTCTTTTTTTCCAGTCATAAT 736 30 100.0 36 .............................. TACTCTGAATTGAAGAAGGATATTGACAATGCGATC 670 30 100.0 36 .............................. TATAGATTGCAGGTATCGCTGGTGTGATTGGTGCAA 604 30 100.0 35 .............................. CAACACTGCGATATGCTGGTGGTTATAGTGGAACT 539 30 100.0 37 .............................. TATGGTGTTAGTTGCTGAGTTGATCCATATGGATCCT 472 30 100.0 36 .............................. TATAGGTGGTGTTAGCGGGCCAAGCGGAACAATTCG 406 30 100.0 37 .............................. TTCAGCATAATCTAACGCCAACAAATGACATTTAAAA 339 30 100.0 35 .............................. TCTGCTATGATCCAAAAAGTTGCTGAATTATTTGT 274 30 100.0 36 .............................. TTTCTTGCAATGGCAAGGATTATCGATGAAGAAAGA 208 30 96.7 36 .............A................ CAAGGGATTTGACAAAAAAGATGACTTACTCAGGGA 142 30 100.0 36 .............................. AGTCAACTTTCTAGCAAGATGGGAAAACCCAAAAAC 76 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 45 30 99.9 36 GTTAAAATCAGACCAAAATGGGATTGAAAT # Left flank : GTCAACTAGAAAGAATAAAAAAGGACCTTAAGATTATTTGCAACGAATCAGAAGATTCAATCATAATCTATTCTTTCAGAACTAAAAGAGCAATGAAAAGAGAAGTTTTAGGCATCGAAAAATCACTAATATCTGAAATAATATGATAAACTTTTTTTATTACCACCTTAAAAACCCTTCAACCTTCTATTCTGCCTTTAACCAAACCTTATTTTGTCGTTTATCAACCTATCTTTCCAAGCCAATTTTTATAACATTTTGTTACTTTATCTCTCCTTCAGTCTTTTACAAAATATACTAACTTGTTTATCTATCTATCCCCATTTAATCTGCTTTTATGTACCTAAATTTATCCTATTATCCCTATTCCATTTTTTGACTCCGTTGACAAAGTCGTCTATCTTTATAAATGGATTGTATTATTAGGGACCGCCGACACAAACCATTAAATACAACCAACAAGAAAAAAGATAAAACAAAAAGAAAGAAAAAATCGCCCT # Right flank : TGTATTCAGAATGGCGCTCGTCATAGAATATTGGATGGATAATAGGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATCAGACCAAAATGGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.70,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA //