Array 1 5124-5481 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NMPP01000003.1 Xanthomonas sp. LMG 12462 strain LMG12462 LMG12462_contig_3, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	===============================	====================================	==================
      5124	    31	 100.0	    36	...............................	ATCGATCAGGCTGACGTCCATCATGGGCGCTTTGCC	
      5191	    31	 100.0	    36	...............................	CCGGTGTCCCTGGCGTGCCCGGCAATCAGGCCAACC	
      5258	    31	 100.0	    34	...............................	GTTCACTGAGGACTACACAATGAAAAGAACTATC  	
      5323	    31	 100.0	    33	...............................	CATCAAAAGCGCTTCGTCATTGTTCATCGGGTT   	
      5387	    31	 100.0	    33	...............................	TCCTTGCCGGCAGGGACTCGCTCATGCATGCCT   	
      5451	    31	  67.7	     0	...C....A..CAA.....C...G.G.G.C.	|                                   	
==========	======	======	======	===============================	====================================	==================
         6	    31	  94.6	    35	GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	                                    	       

# Left flank :   CGAAGATTGCGCCGAACTGCACACCGCAGCACCGGCGATCCTGCACCGCCGCGCGCCGACGCTGGTGGCGGCGTTCGCGCAACGCGGCTGGGCACTGCCGGAACGGATCGATCGCATCTATTCGCCGCAACGGGCGCTGGACGCACTGGGCTGGCAACCGCGCCATGGTTTCGCGGAAGTGCTGCACCAATACGACACGCACGTGCCCGAGGTGCTGCCGCCCAACGACGGGCGCGCCGTCAGCGACTGAGCGCCTGGCTCTGATCGGCACACCGGGTTCGGATGGCGGAGCAAGGACGTGCGCCGTCGGCGCGAACCGGAAGCGCCCAGGGTTTTACCGGCCGGTTCGTGAATCCCGATAAGCACTTGATCGAAAAAGCGAAATGCCTGGGCAGCGTGAAACCTGGCAAGGCAGCCCCGCCCCCTGCACGTCGCCGCACGCCCGTTTCGCGAAATCGGCACTTTTTCCTTAGTCCCGGCCGGCAGTTATGCTGAGGGCT
# Right flank :  CGTGCCAGGCCCTTGGTCGCGCGGAGGCGCGATTCACGCCATCACCGCACCATGGACCTCAGCGCAGCAGCACCGAAATGCCGAGGCCGCCCTGCCAGTCCGGGGTCTGCGACGACAGGCCGCGCAACACCGACAGATCCAGTTGCGCGCGGTTGGCGAACAGCCAGGTGACGCCGCTGCCGAGCGCGCGCATCTCGTCCTCGCCGCCGCCGATGCCGGCCTCGACGTAGGCGCTCAGCGAGTCGCCCGCGTAGAAGGTGTAGCTCGGCGAGACGCTCCAGCCGGAGCCGTCCTCGCTGTCGCTGACATTGCCGTACAGCGCCAGGCTGCGCCCCTCCGGCAGGTCCCAGCTGGCGCTTACGCCCAGGTCGTAGCGGTGGCCGGCATCGCCGTACGGCGCGCGACCGACCGGCAGGCTGGCGCTGCCGAGCAAGGCCCAACTGACGCGGTCGCTGGCGCTGGGCAATGCCTGCTTCAAGCCGATGCTGGCGTCGCCGCCA

# Questionable array : NO	 Score: 8.99
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.73, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCGCCCTCACGGGCGCGTGGATTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [5,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTCGCGCCCTCACGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.20,-7.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-10] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [41.7-31.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [9.68,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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