Array 1 52745-54133 **** Predicted by CRISPRDetect 2.4 *** >NZ_VZOH01000005.1 Aliarcobacter skirrowii CCUG 10374 contig_0000005, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================================================================================== ================== 52745 36 91.7 33 ....................TAT............. ATAGCTTTTTCGTTATTTATTACTATCATTTAA 52814 36 91.7 33 ....................TAT............. GTATTCTCGACATTGGAATCCTCCTTGATTATA 52883 36 91.7 33 ....................TAT............. TTTCCTCCCTTTTTGAATAGGGCACATTTTTAA 52952 36 91.7 33 ....................TAT............. TTCACAACTTGACCACTTCTTCTAGCTAAATCA 53021 36 97.2 36 ......................T............. AACTTGTCCTAAACCCCTTTTGGGTATGGTTAGCCT 53093 36 97.2 33 ......................T............. TAGTATCTGCTACTCCACCTACAGGGCTTTCAC 53162 36 97.2 34 ......................T............. AATATTCTTTAAAGGCTCTACTGATAAGAACTTT 53232 36 80.6 106 ......................TTTT.CC......T TCAGTCATCACTAAAAATTACGAAATCGCCAAGGCTCATTTCTATTTTTAGGATTCAGAAGAGGGGATTGAAACTAAAGTTGCGTATCCATATTTTGTTTTTCTAA TG,C [53263,53266] 53377 36 80.6 107 ......................TTTT.CC......T TCAGTCATCACTAAAAATCACGAAATCGCCAAGGCTCATTTCTATTTTTAGGATTCAGAAGAGGGGATTGAAACCAAATTGTGCTAAAGCATTTCCTTGCCCAGTAT TG,C [53408,53411] 53523 36 80.6 105 ......................TTTT.CC......T TCAGTCATCACTAAAAATTACGAAAAGCTAAAGCTTATTCTATTTTTAGGACTCAGAAGAGGGGATTGAAACTACAACCCAAGCTCTAGGAACTGTCATATCTAA TG,C [53554,53557] 53667 36 97.2 36 ......................T............. GTAAAAGAAGTATCAGAATGAAATAATTTTTCATTT 53739 36 97.2 36 ......................T............. AATAACTCTTCTTCATCACAATCATCTTTATCATAG 53811 36 97.2 35 ......................T............. AAGATGGAAAAATTCTATCGTGTTGATTTCCTTAA 53882 36 100.0 35 .................................... TGAACATCGGCAAATATAGTGATATTAAAAGTGTT 53953 36 100.0 36 .................................... CATCTTTTCAAAGATGTCTTTGTTTGTTATTATAAG 54025 36 100.0 37 .................................... ATCTGAACCAGTCTCTAAAGCTCTTTGAAAGTCTAGG 54098 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =========================================================================================================== ================== 17 36 93.6 48 ATTACAACATTGACCCGATTATAAGGGGATTGAAAC # Left flank : CTCAAAGGATATTTTAGATGAAGTTGCATGATTATATTATTTGTTATGATATTTCAGATAAAAAAAGATTGGTAAAAATATCAAAACTACTTGAAAAAACAGCAGCTAGAATACAATACTCTATATACTTTTATCCAAAAGTAGCAAAAGAGTGTATAGATGATTTAGTAGAAAAATTGAATAAACTAATAAATCAAGAAGAGGATGATATAAGAATTTATAAAATTGATATTAAAAATAGTATCCATCTAAAAAGTGGAATAGATTTGCAAAATCCATTTGTGATTTGATAAGAATTTAAAGGGATTTTAAATGCTTTTAAGCTACTGTTTTGTTTTGTTATTTAAAAATCTATTGTTAACTTTATATAAGATTTTTTTAAGAGTAACAAAAAACTTCTATCTAGCTATTTTTGGGCTAGAGTTTTTTAAAACTACTATCTTTTTTATATTTAAGCAAAATATAAGATATAGAAGTAGTGATTTTATGGTATGTAGAAG # Right flank : CTCTTGTATCCTTTTTTTTGGTTTTTTCTATTCTATATTACAACATTGACCCGATTATTTTTGCCTTTGGCAAATTCAGTCATCACTAAAAATTACGAAATCGTCAAGGCTCATTTCTATTTTTAGGATTCAGAAGAGGGGATTGAAACAAAAAGTCGTATAATTTCCACCATGCGTAAGAGTAATTACAACATTGACCCGATTATTTTTGCCTTTGGCAAATTCAGTCATCACTAAAAATCACGAAATCGCCAAGGCTCATTTCTATTTTTAGGATTCAGAAGAGGGGATTGAAACATAGTGTTGCATAACTTTAATCATTTCTTTTAATTACAACATTGACCCGATTATTTTTGCCTTTGGCAAATTCAGTCATCACTAAAAATTACGAAATCGCCAAGGCTCATTTCTATTTTTAGGACTCAGAAAAAGGGGATTTTGATTTACAATTTTAAAAAGTATAAAGTATTAATAATCTAAAACGACAAATTGTGTCAAAA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:0, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTACAACATTGACCCGATTATAAGGGGATTGAAAC # Alternate repeat : ATTACAACATTGACCCGATTATTAGGGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.00,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [0-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.68 Confidence: HIGH] # Array family : NA //