Array 1 2510-642 **** Predicted by CRISPRDetect 2.4 *** >NZ_LXQC01000147.1 Methylacidiphilum sp. Phi contig_33, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 2509 37 100.0 36 ..................................... TCTGCAAGATGATAACCGGCAGCAAGACCTTCCTGG 2436 37 100.0 37 ..................................... TGTTCCTTATCATTTCGGTGATCCCCTTGACGGCCCC 2362 37 100.0 37 ..................................... ATACCCCGTCAAATCTTTAATGGTAATAGCCCCAGTG 2288 37 100.0 35 ..................................... TAATAAACCTTGGATTTCCCGAAATCAATTTTGGA 2216 37 100.0 37 ..................................... ATACCCCGTCAAATCTTTAATGGTGATAGCCCCAGTG 2142 37 100.0 35 ..................................... TAATAAACCTTGGATTTCCCGACATCAATTTTGGA 2070 37 100.0 37 ..................................... TGTTGCGAGATTTGACCAGGACGTCATTTATTTTATG 1996 37 100.0 36 ..................................... CTTTTATTTCATCTCTTATTTGTGAGCATAGGCTCT 1923 37 100.0 37 ..................................... TTCGATCGTGCCACCATCATAGCAAATCGTATGTCGG 1849 37 100.0 35 ..................................... ATATTAACAATACTCCTTCATATATAAATGATTCT 1777 37 100.0 37 ..................................... GAATTTATTGACATACTGGGCAGCGACCAATGAACTG 1703 37 100.0 37 ..................................... TTCGTATGGGGGTTTGATATAGAAAAACTTCCAGATC 1629 37 100.0 37 ..................................... CGAACCAGGGTGTAGCCAGAGGCCATGGTTCTCCTTC 1555 37 100.0 36 ..................................... GTCATTATCCCCCACAAATGATGATGAAGGCCCCCC 1482 37 100.0 37 ..................................... CTGTCTAAATGGAGGCCTAACTTGCTCAAGCCATCTT 1408 37 100.0 34 ..................................... TTGCCTGATTGAGCTGGAAATGTCCTCCCTTATT 1337 37 100.0 36 ..................................... ATTGAAATAATATTTAATTCTATTGGGATCAAACTG 1264 37 100.0 36 ..................................... GGAAAGATAAATGGGTACATCTGCGATCAATATAGC 1191 37 97.3 36 ..................T.................. TAATGACAATCCTATCACCTCCTTTGGCTATATTTA 1118 37 100.0 37 ..................................... ATTGCGTAGGAGTTATCTCCGAACTGTCCTGGAGTCA 1044 37 100.0 37 ..................................... ATACTCCACGTGTTCCCATAGAACACCCGGAGTATGA 970 37 100.0 36 ..................................... CTATAGAGACACCATTAGAGAGGTCGGCTACGATTT 897 37 100.0 35 ..................................... TCACGTTTACATTTGACAGAACTTCCACCTGGTTC 825 37 100.0 37 ..................................... TGGTAATTACACGGATGAATTCTGGGCGGAGCCAAAT 751 37 100.0 35 ..................................... AGGTCCTCCTCAAGTGGAGGAGAAATGAAAATTAT 679 37 89.2 0 ...............................C..GGG | A [644] ========== ====== ====== ====== ===================================== ===================================== ================== 26 37 99.5 36 GTAGAAACTAATATAACTCCCTGAAAGGGATTGAAAT # Left flank : GTCGTATCATATGACATAAAAGAAGACCGTCGCAGAGGAAGAATTTTTAGAACTCTAAAAAACTTTGGACAGTGGGTTCAGTTTAGCGTGTTTGAGTGCGATATTGAAAAAGGTGATTACCTGAGGATGAGGGACATGCTAGAGAAGCATATAAATCTTCAGGAAGGTGACAGTATTAGATTTTATTTTCTATGTGAAGAAGACATTCAGAAGATAGAAAGAATAGGCGGTATTCAACCTTTATCCGAAGACGCGATTATATTATAGTGAATGATTGTAAGCAACATTATTTGATAAATCGAGTATTTGGTCCCGATGATCGAAGCTTACATGAAAATCTTTGGTGATGCTCGAAAATCGAAAAAGGTTGATTTTATCTTGATTGTATGAAAAACTTACAAAAAAGATTATTGTTCTTTGAAAATTTAAATCCTAATAAAAATGAGATACTCGGAAGATTATTGTAAAAGCATTGATTATCAAAGGATTAGGAAGAGTGA # Right flank : AAGTTTTAAAAATAATCAAAAAACTTTTTTTTCTTCTTTAAAAAAAAATTAACATGGCTATGATGAAAATATGCCCATTATGGCTTTGATAATTATTCTGTTTTTCTCCCTCTCCTTTTTTCTTTCACCTAGTTATGCCTTAGAAAGAGGTTCATCACCTTCTAAGCCTGCTGATACTACAAGCAAAAAGCCGACGGAAATTAAGTATGTTGTAAAAAGGGGAGATAGTCTTTGGAAAATTTCCAGAAAGTACAAGGTAACCGTTGAAGCCTTGATGGCTATCAATGAGTTGAAAGATGATAGATTGAAACCTGGCCAAGAATTAATCATTCCTCCCAAAGGCTATAGACCACCTCCTAAAGAGCTTTTGCCACTTCCTTCTCAAGAAGAAAAAAAGGATACATCAAAAACACCCGAGCCACCCCCATTACAAAACCCCTGATTTTTCTGTCTAGGTTATAGAGTGTTTCAAGGGATTGGTTGATGAATCCTTTTATTTT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGAAACTAATATAACTCCCTGAAAGGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.50,-5.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [85.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA // Array 1 802-159 **** Predicted by CRISPRDetect 2.4 *** >NZ_LXQC01000198.1 Methylacidiphilum sp. Phi contig_8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 801 37 100.0 41 ..................................... TTGCTGCTTCTCTCCGGGTCACTGGGGTCAATCATCCGACC 723 37 100.0 38 ..................................... CGCCCTGGGTATTATTTCCCCATGGAGGTCTTTTGAAA 648 37 100.0 39 ..................................... CATCATCCTCCAATCATCGATTGGAGGTTCCTCCACCAC 572 37 100.0 39 ..................................... ATCCCCAAGTCGATTTCGACTTGGGGGGGCCAATATTCA 496 37 100.0 38 ..................................... CCACGCCCGGGATTTTTATTTTCCCTTCCCCGGCCCGG 421 37 100.0 38 ..................................... CAATTGCTAACCCAGCTTCACCTGGCAGCCGGTTGTTA 346 37 100.0 39 ..................................... TTGAGGCCTTCTCCTCCTTATCACTTGGAATGAGGCCCA 270 37 100.0 38 ..................................... GGGGTAATTTTCTACCCCCAGGAGTACGCTCAAATCTG 195 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 9 37 100.0 39 GAGAAACTTAGAGATGAAGCCGAAAGGCAATTGAGAC # Left flank : ATTTGTGAAGACTATGGAGTCAGAGTCCAATTTAGCGTCTTTGAATGTTTTTTAGAAGAACTTGAACTAGAAGAGCTCTGGGAAAAATTACTTGCAGAGATAAACCCTAAGGAAGATCGGATTGTAGCCTATAAAATTGATGCCCGGCTAGCAAAGGAAATAAAAACAGCAGGAACAATGGTTTGCTCCGAAAAAGTAATCTGTTTTCTGGTATAAATCCCATTTTAATTGAGATTAAAAAAAGATTTATTAAAATACTTAAAATTGATAAAACCGGGCAAAATTTAAAAGGACGGTAGTTTTGTCTCATTTTATCAATATTTAGGTATTGAGCCTTTTGAGACAAAGATAGTGAGATTAATATTACAGTATGTGCTTTTCATTATCAATGAATTATGAAATATAAGCTGTTTTTAAGCATAAACTATGCCAACTAAAAAATAGGGTCAATACCTTTTGCTTTATTTTCACGTTGGTAATTAAAGATTTAAAAAGACGCA # Right flank : CCCTCATACTGGATAACTGAACTTCCGAAACTCTAAAATATAAGTTATTGCAGCAGAACGAGATAACATTTTTATTCTGCCTACAGGGCCCATTTGGGCGGATGAGCAAACAGCGGTAGTAGGTCGAGTTTTTGCACCAATGCGCCTGAGCTCTGTAGG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGAAACTTAGAGATGAAGCCGAAAGGCAATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.70,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //