Array 1 12942-12356 **** Predicted by CRISPRDetect 2.4 *** >NZ_KL370889.1 Bacteroides sp. Ga6A1 T544DRAFT_scaffold00025.25, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================ ================== 12941 37 100.0 32 ..................................... GTATTGGATACGGCGCTTTCAGTTACTGTTCT 12872 37 97.3 32 ................A.................... CCATTGAATACCGCACTTTCATTTACTGTCCT 12803 37 100.0 32 ..................................... CCATTGGAGACAACGCTTTCTCTGGTTGCACG 12734 37 100.0 32 ..................................... CCATCGGATCCCACGCTTTCAGTTACTGTTCT 12665 37 89.2 29 .A.....................A..C........C. GCATCGAAGACGGGGTTTTCTCTGGCTGC 12599 37 89.2 32 .....A....................C.AT....... ACATCGGAGACTACGCTTTTGCTAGCTGCTCG 12530 37 94.6 32 ............G.............C.......... GAATCGGATCCGGCGCTTTCTATGGATGCACG 12461 37 97.3 32 ..........................C.......... GAATCGGAGACAAGGCTTTCTATGGATGCACG 12392 37 97.3 0 ..........................C.......... | ========== ====== ====== ====== ===================================== ================================ ================== 9 37 96.1 32 GGACTTACATCCATTACTATACCGAATAGCGTGACTA # Left flank : CTAGCATTGGAGAATACGCTTTCCAATACTGTCCTGAACTTACATCCATTACTTTACCTAACAGCGTGACTAGCATTGGAGAATACGCTTTCCAATACTGCTCTGGACTCACATCCATTACTATACCAAACAGCGTAATTAGCATTGAAAATAGTGTTTTCTCTGGCTGCACGGGACTTACATCCATCACTATACCGAATAGCGTGACTAGCATTGGACAATACGCTTTCTCTGGATGCACGGGACTTACATCCATTACTATACCGAACAGCGTGACTAACATTGGAGAAGACGCTTTCTATGACTGCTATGTAACAAAAGAAAACTTTCACAATCAAAGCAATATCACCCCTTCAGGATTAACTGTTTGTGATGTAAGAACAGAATCAGGCATTTGTATAAAAGGCAATGCTCTTGTAAGGTATCTAGGAAAAGAGACAACTTATTCTATTCCAAACAGTATTACTAACATTGGTGAAAGAGCTTTCCAAGACTGCTCT # Right flank : ACATTGGAGAAGACGCTTTCTATGACTGCAAGAACTTAAAAACTGTTTACTGTTACGCAACAAAATTACCAGAAACAAACGAAAACGCATTCGGTATTCATGGCACCATAAATTACGCCACTCTCTATGTTCCAGCCTCTGCTATTAACGAATACAAAGCAATTGCTCCATGGAGGTGGTTTGGCAAAATTCTGCCAATAGAGGATGCAACAACACAAATAGATGCAACATCAACAAACGATTATAACATAGTAGCCAACGGAAGCAATATCATAGTAAAAAGCGATGCTGATGGCGAAAAGGTAAGCATATATACCATTAACGGGCAATTGATTGGCACAACTGCTATAAGAAACGGTTCAGCCGTAATTAACACAAACTTAAAATCGGGTTCTGTTGCAATCGTAAAGATTGGGCAAAATACTTACAAAATCCGTTTAGATTGATATTTTTTAAGATAAAGACCACGCCATTACAAAAAGCGTGGTCTTATCTTTTTT # Questionable array : NO Score: 2.65 # Score Detail : 1:0, 2:0, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.59, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGACTTACATCCATTACTATACCGAATAGCGTGACTA # Alternate repeat : GGACTTACATCCATTACTATACCGAACAGCGTGACTA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.50,-0.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 1 65294-65716 **** Predicted by CRISPRDetect 2.4 *** >NZ_JNLA01000011.1 Bacteroides sp. Ga6A1 T544DRAFT_scaffold00007.7_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 65294 30 96.7 36 ..........T................... GATTCTTTCTGTGTGCTTCGAGGTTCTTAATCTTCA 65360 30 96.7 35 ..........T................... TAACATACCCACACACCGCAGCTATCTTTCAGCCG 65425 30 100.0 34 .............................. ATGATTATCTCGAACTTGATTAAGGTTGTGCGTG 65489 30 100.0 34 .............................. TCTCTTCGGCTTTGGCAAGTGCCCTTGTCTCTGC 65553 30 100.0 37 .............................. TACACATCGCCCACCTTCAGCGGTGCGCGGCAAGTCT 65620 29 96.7 38 ...................-.......... AGACTATGCGCGTCATCGAAGCAATAAAGGCAAAGACA 65687 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 7 30 98.6 36 ATTCTAATCGAACCATAGTGGAATTGAAAC # Left flank : AGGTTTGCAAACGCAAACTTTGGCTCTTTGCCAACGGAATTAATATGGAGTTATGTATGGAGAAACGAGTTGCAAAGATGCTAAAACTGTGTCGCAAATATTTAAATTGGGTTCAGAATTCTGTCTTTGAAGGAGAAATAACCGAATTTCAACTAATACAGTTAGAAGCATCTGCTAAAAAATTTATGGATCCAGACATTGACAGCATAATAGTATTCTCATCGCGCTCGCAAATGTTTATGGATAAGCGTATTATAGGCGCAGAACGAAATCCAATTGATAATTTTCTATAACCTCTTAGGTTGTCGAACTACATTTTTTAGTTATTCTTACGCCAACAAAAAACTTTAACAAGGTATATTTTTCGTTCTAATACTCTGATTAAAAAACAGTTGTCGATCTTCGGCATTTTTTTATCATTACACATTGACATTTCTTTCAGATTATTTTTGTAATTTTGCACTTGATTTCATGGGGCTTTCAGCCCTATTGTTGTCAGC # Right flank : CAAGGTCTATCTCTCCAGTCCACTTAATGCAGATTTTCATAAATAAAAAACAGATAGTACCACCATCCGCAAGGATAGCGACACTATCTGTTTTTATTAGTGAGTTCAACACCTCTACTATCTTTGTGTTATATTATATCACAACTCCCTTATTATCTTGTCAAACTCGTCGGCCTTGCCGTTGTTGCCGGTTAACTTCTGCAACAACTTTTTGCGGACTTTTGTGACGGCTGTCGGACTTCTGCCTATCAAAACCGAAATCTCTGACGGACCGAAGCCGAGGCGGATAAGCGTGCAGATATAAATATCCTGTATCGAAATCTCCGGAATGTTGGTTCGTATGTATGATGTGAACTTCGGATTCTTCTCGTCCACGGCATTCAGGAGTTGCAGAAGCATATCGTCGGCGGCAATCTGACCTCCTCGGGCAAGCGCGTGAAGTTCGTTGCACAGCGAGCCGCCAGCCATATCAGCCATGAAAGCCTGCGTTTCCTGCTCGC # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCTAATCGAACCATAGTGGAATTGAAAC # Alternate repeat : ATTCTAATCGTACCATAGTGGAATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA //