Array 1 55473-57306 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPKQ01000012.1 Sphaerotilus natans strain JCM 20382 sequence012, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 55473 37 100.0 35 ..................................... TCTGTCTCGGGCTCAGTCGTGACCGTTAAGGATTT 55545 37 100.0 34 ..................................... AAGGGCTACCGCAGGACATTGAAGATGGACACGC 55616 37 100.0 36 ..................................... ACGCCTATCTCCGCGTCAGCACCGACGCGCAGGACG 55689 37 100.0 36 ..................................... CAGATCGGCGCGACCGACGCGAACCCGGCCGGCGCG 55762 37 100.0 34 ..................................... CCGTGTTGGCCCGTGGCGAGGGGTGGGGATATAT 55833 37 100.0 35 ..................................... ACACTGACCGGGACCAGCGGCGGCACGACCGCCTT 55905 37 100.0 33 ..................................... TCTGGTCCGGATCGCGTCCGGATTTTCTCGGAC 55975 37 100.0 36 ..................................... ATCTACGTGCAACTGCCGACCGGCTCGACCGCCCCC 56048 37 100.0 35 ..................................... AATGAGCCGCTGCGCCATCGCGGCGTCTTCAATGG 56120 37 100.0 36 ..................................... TGCGACATGCTGGCGATGCACAACAAGATCCGCCGC 56193 37 100.0 34 ..................................... GTCTGGCCGGCGCGGCGGCCGAACTCGACCCACT 56264 37 100.0 34 ..................................... ATTACCGCCTGCGCTTGCCTTGATGTGCTGCACG 56335 37 100.0 37 ..................................... CGCATGTCCGGCAAGCTGCCTGAGTGGGGTGGCGTGG 56409 37 97.3 35 .................T................... AGGCGGATACCACAACGTTTCTTTTGCCTTTTCGA 56481 37 97.3 38 .................T................... AAGCGGGTCGCTGAGGCCGTGTCGCAAGTCGAGGACTC 56556 37 97.3 35 .................T................... TGGATGGCGTCGACGATCGACTTGAGTTCGAGCGT 56628 37 97.3 34 .................T................... ACGAACGGGCCGCTGGTCACATCGCCGTTGGCGG 56699 37 97.3 34 .................T................... CTGCCCATGCGGCGGGATGCCGTCGTGCTGCCGG 56770 37 97.3 34 .................T................... GAGGTGGCGTTGCGGGCCGCCGGGCACCTGCCGT 56841 37 94.6 34 .................T..T................ ATGCCGAGCTGCCGCACCACCTGGGGCGGGGAGG 56912 37 100.0 36 ..................................... AGCCCGGCCGTGATGTCGGGCGCAAAGCCCGATTCG 56985 37 100.0 34 ..................................... CGGGCGTCTGACGACAAAGCCAGCGTGCTGGCTG 57056 37 100.0 34 ..................................... CTGGGCATCGTCATGCCGATGCGGGCCTCAGGGG 57127 37 100.0 35 ..................................... AACCACTCCAGCGCGCCCGGCAAGGTCTGTCCCGC 57199 37 100.0 34 ..................................... TGGTTCGCAGCCGGCGGAACGGTGCATTGGGTGT 57270 37 89.2 0 .................T..T............G..T | ========== ====== ====== ====== ===================================== ====================================== ================== 26 37 98.8 35 ATCTCATTCCCGGCGGACAGCCGGGTTGGATTGAAAC # Left flank : GGTGCTGCGCCAGTGGCTGAAGCCCTCGCGCTGCTGGGCCAGCGTGCAGCCGGTGATCCTGCCTGGCTTGGACAGCGGCGAGCCGCGGCGCACACGCAAGCTGCTGCTGCGCGCGCTGGCGCACGCGGGTCTGGACGCCGGACTGGTCGAGCACCTGGAATTCGGCCGCCATGGCTTCCTGCCGCAGTCGGTGGCGCACCGCGACACCCGACTGAAGGACCGCGACAGCTGGCGCCTGCCCGCCGTCCATGTCCGTCTGCGTTTCACGCACCCGGTCAGCGGACCGCTGGTGCTCGGCCAGGGGCGCAACGCTGGCGTGGGTACACTGGTGCCTTGCGCGGACCTCGAGTGACCGGCTTCAGTGCGGGAGGTTCGCGCACGGTGGATCAACGACTTGCAATCGCATCCGGTGCGACAAGCCTTTCAGCCCACTCGCCGATCGACCGGTTCGCGCAAGACCGGCCGATTCGCGTGCAGAATCAAGCACTTGCCAGTGCGGC # Right flank : TTGAATTCGGTCTTGAACTCAGATCACCGGCGCCCTCGGCAGCGCCGCATCCAGCGCCATCAGCCGCGGGCGCAGCTGCATCCAGCTGGTGCGGGTGGGGCTGTAGACCAGGTGCATCGCCAGGCCGGGCTGGGAGAGCAGGGTGCGCACGCCCAGCGCCTCGGTGCCGCCCATGACCAGCACCTCGTCGGCCTGGCCCGGGATCTGCAGCTGGCGCCGGGTGCTGTTGCCGGCGGCCAGCAGCAGCGAGCCGCGCCGCGCCAGATCCGGCCCGCGTGCGACCGAGCCGGCATGCGCGATCACCCGGCTGGTGGCGATGTCGAACACGCAGGCCGCCTGCACGCCGCTGAGCGCATGCAGCTCCAGCGCGAAGCGCTCCATCGGCGTGGCCTGGGCGGCCAGGGCCGGGCGATCGGCGCCGGTCGGCGGCATCGGCTGCGGCGCGCTGCTGGCGCTGGCCGGCGGGAAGGGCGACAGCAGCACGCCGGTGCCGTCCGGGC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:0, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCTCATTCCCGGCGGACAGCCGGGTTGGATTGAAAC # Alternate repeat : ATCTCATTCCCGGCGGATAGCCGGGTTGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.00,-12.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 1 282455-286644 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPKQ01000001.1 Sphaerotilus natans strain JCM 20382 sequence001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 282455 29 100.0 32 ............................. ACGTGAAACCAGGTCACATCGGCCGCCAGCTC 282516 29 96.6 33 ............................A GCTGGCCGAGTCCGATCAGGAGCGGCTGCTGCT 282578 29 100.0 33 ............................. AACCGCGGCATCCGCGTGATGGGCGTCCGGGTC 282640 29 100.0 32 ............................. TAGGCCGGGCCCGGCACCGGATCGGGGTCCCA 282701 29 100.0 32 ............................. ACAGCGCGCCGGATGCCTGCATGCGCCGGATC 282762 29 100.0 33 ............................. CCACCCTGTACACCTTCGACGATGGCTCTGTGC 282824 29 100.0 32 ............................. ATGCCGGACGAACTGCGCCAGAAGCTGGCCGA 282885 29 100.0 32 ............................. ACGTGAAACCAGGTCACATCGGCCGCCAGCTC 282946 29 100.0 33 ............................. CCGTCGAAGAAGCGGCCCGCGTCGACCTGCTGG 283008 29 100.0 32 ............................. GGCGCAGCGGCAGAACGCGCGATTGCCGACGC 283069 29 100.0 32 ............................. GCGCTGAACTGGCGTTCTGTGCGTGTGCGTGC 283130 29 100.0 32 ............................. CCGTGCAGTACCTGCGCGACGAAACGCGGCTG 283191 29 100.0 32 ............................. TCCGGCCGGCTGGTGCGCTCGCTCGAGCGGGT 283252 29 100.0 32 ............................. ATCACGGCCGAGCAGGTGCGCACCACGCTGGC 283313 29 100.0 32 ............................. GCCCAGACCGGCAACACCCGCGAGGAGCGGCT 283374 29 100.0 33 ............................. CACGCCGGGCAGCGTGCCGCCAGTGAGGACCGG 283436 29 100.0 32 ............................. TGAGCTACCGATCCGGCGCGCAGTGGTACGTG 283497 29 100.0 32 ............................. ATCCACGAGATGCCGTCGACGGTGATGCGGAT 283558 29 100.0 32 ............................. GCCGCTGGCGCGTGCGGGCCGGCGCGTGGCAC 283619 29 100.0 34 ............................. GCATCGGCCAGCCCTCGCCGGCGGCGTGCGCTGC 283682 29 100.0 32 ............................. GCGCTGGATTGACTCGCCTAGGAAGGTCGTCC 283743 29 100.0 32 ............................. GCGGCGCACCGCGGGCCGGGCCGGCGCGCGGA 283804 29 100.0 32 ............................. TACCAGGCCCCCGACTTGTCGACCAGCTTGGC 283865 29 100.0 32 ............................. ACCTGAACGACCTCGCCGAGCTGACGACTGAG 283926 29 100.0 32 ............................. ACGGGCCAGTACAGCGAGTGCGCCAGACCCAG 283987 29 100.0 32 ............................. CGCACGGCGCAGGCACCGATTCGCCGGCCAGC 284048 29 100.0 32 ............................. CCGGTAGAGCTTGGTCTGGCTGCGCATCACCT 284109 29 100.0 33 ............................. CAGGGCCAGGGCGCACAGGACCGTGATCGGTCG 284171 29 100.0 32 ............................. CGATCTCGGATTATCCGTGCAGCGACGCCGAC 284232 29 100.0 32 ............................. ACCCCTCGGTCGCGACACGATCAGACCCTGGT 284293 29 100.0 32 ............................. CCGAGCCGGGCGTAGCTGACCGTGACCCGATC 284354 29 100.0 32 ............................. GCGGGCGAGATCCCGGCGATCCTGCAGGAGGG 284415 29 100.0 32 ............................. AAGGCACGCGCGGCGTTGTCGAGTGCGCTGGT 284476 29 100.0 32 ............................. TCCAGTTCCTGGTCCGGGGTGAGCATGACGTC 284537 29 100.0 32 ............................. TCCGCACGACAATCGAGACGCTCACGGCGCAG 284598 29 100.0 33 ............................. GAGTCCACGACCATGAACCGTGAAGAACTGGAG 284660 29 100.0 32 ............................. GAGAAGGTCTCGGCCGTCGTGGTCACCAACTC 284721 29 100.0 32 ............................. GGCGCGACGTCCATCCCCGTCAGCGGTACCGG 284782 29 100.0 32 ............................. GGGACCAAGGGCCTCGGCCTGTCGGTGCGCGC 284843 29 100.0 32 ............................. GGGTGGGTGACGGCGTCAGGGCTGGCGTCAGA 284904 29 100.0 32 ............................. GGCGTGGTCACGATCAGCGCCAGCCGGTACAT 284965 29 100.0 33 ............................. GACGGCGCGAGCTATCCGGCCGTCCATCAGTTC 285027 29 100.0 32 ............................. ACGGAGAGGTCCACCAGTCGCCGCCGACAACC 285088 29 100.0 32 ............................. TCCTACGCGGGCGAGTCCGGCCCGGTGGAATG 285149 29 100.0 32 ............................. AAGCGAGTCTTCTCGCGCACCGCCAGATCCAG 285210 29 100.0 32 ............................. GTGGAGCTGATGGGCAAGGACGGCGGGCCAGT 285271 29 100.0 32 ............................. ACCTGGGACGCCTACGTCGATGACCTGCAGAC 285332 29 100.0 33 ............................. GACACCAGCAAGACCGGCGCCGGCATCAGCCAG 285394 29 100.0 32 ............................. ACGACGCTGGCAGACGACGGGCGCGTCAAGGT 285455 29 100.0 32 ............................. TTGATTGAGATGAGGAGATGAATCCTGGTGTC 285516 29 100.0 32 ............................. CCCACATGGCCTTTGGCGGCGGCCGCCTTCAG 285577 29 100.0 32 ............................. GGCGGATGGGAGGCGCTGCAGGAGCAGATGAC 285638 29 100.0 32 ............................. ACCGGATGGCGGGCCTCGCAGCGCTTCGCCCA 285699 29 100.0 33 ............................. AACGAGCGCATCAACGAGCTCGAGCGCCAGCTC 285761 29 100.0 32 ............................. TTCAGCGCATGGGTGGTTGTCACGGGTGCCGG 285822 29 100.0 32 ............................. CCCGACACGCCGCTCGGCTGGGCCAGCTTGCC 285883 29 100.0 32 ............................. GCCTGTTTGCGTTCCTGATGGGTCGGATGCAG 285944 29 100.0 32 ............................. TGCCTTGAGATCCTGGCGTCCGTGCTCGATCA 286005 29 100.0 32 ............................. GCCGCCCTGCAGTACGAAAACGACTTCCAGCG 286066 29 100.0 32 ............................. GCCAGTGTGCTGGCCGATCTGTGCGAGCAGAT 286127 29 100.0 32 ............................. TCGCGCCCGGCCCTCGGGTGTTGCCTCGAGTC 286188 29 100.0 32 ............................. GCGGCCAGCGTGAGCCACGACGTGAGGTGATG 286249 29 96.6 33 ............................A GAACCCGGAAGGTGCCCCGTGATGTCCGATGAA 286311 29 100.0 32 ............................. GCGTCGCCGCTGGTCCAGCGCGCGGCGTAAGC 286372 29 100.0 32 ............................. ATCAGGTCCAGAAGACCGAACAGCCGACCGCC 286433 29 100.0 32 ............................. ACCCCCGGCCAGCACCAGGCCGGCCTGGGAGA 286494 29 100.0 32 ............................. CTGCACAACCTGGCGCACAGCGTGCTGATCCT 286555 29 100.0 32 ............................. GTCCACGACGTGGCCGGCTGCCCGCCGACCAG 286616 29 86.2 0 ...........CTC.............A. | ========== ====== ====== ====== ============================= ================================== ================== 69 29 99.7 32 GCGTTCCCCACGGGCGTGGGGATGAACCG # Left flank : CCGGCAGACCAAGCTGCTGGACCGGATCATTCCGGACATTGAGGAGATCCTGGCCGCCGGCGAGGTGCCCCGGCCCGAGGCACCGGCGGATGCCGTCGGCCCGGCCTTGCCCAATCCTGAAGGTTTCGGTGATGCTGGTCATCGTGCTTGAGAACGCGCCGCCGCGTCTGCGCGGGCGGCTGGCGGTCTGGCTGCTCGAAGTCCGGGCAGGCGTCTACGTCGGCAACTACTCGAAGCGGGTCCGCGAGCAGATCTGGTCGCAGGTCGAGGAAGGCATCGAGGACGGCAACGCGGTGATGGTCTGGCGCAGCAGCGCCGAAGCCGGCTTCGAGTTCAAGACCCTTGGAACGAACCGCCGCATGCCCGCCGACTTCGACGGCGTGCAGCTGGTGAGCTTCCATCCCGACACCGCTCTTTAACAACTCGACTCGAACCGGCCTTTCCTCGGTAGATTTTTGAGAGGCTGAAAACTCTTTCCGAATCAATGAGATAGGATTAGA # Right flank : GGCCACATTTGAAAGTGCGCCTGCTGAACCGGGGACGTGTTCAATAGCCTGGCCGTGGCAGGCTTCACCTCACCAGCGGCCTGACCGTGCTGAACCCCCCATCCACCGCGATCACCTGGCCGGTCAGCCGCGAGGCCTCGTCGCTCAGCAGCCAGGCGGTGGTGGCGGCCACGGTGTCGGCGCCCTGCACGCCGCCGAGCGGGTACTGGCGCGCGGCGGCCTCGCGCATGGCTTCGACCTTGAGCATCGGGGCGGTCATCGGCGTCTCGGTCATGCCGGGCGCGACCACGTTGATGCGCAGGCCGGCCGGCGCGTAGGTGGCCGCCGCGCTGCGCGCCAGGGCCTCGATGCCGCCCTTGGCCGCGGCGATCGCCTCATGGTTGGCCACGCCGATGCGCGCCACCACCGAGCTGCACAGCACCGCCGCGCCGGGCTGGCCGGCCGCGCGCAGCGCCTCGATCCAGGCGCCGAGCATGAAGACCGCGCTGTCGAGGTTGACG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTTCCCCACGGGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCGTTCCCCACGGGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 724-128 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPKQ01000027.1 Sphaerotilus natans strain JCM 20382 sequence027, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================== ================== 723 37 100.0 31 ..................................... GCGGCGAAGGGTGCGGATGGTCTTAAGCACG 655 37 100.0 32 ..................................... AATTTGGTGAGCTTGCGCTTTTGTTCTTCGCT 586 37 100.0 35 ..................................... GCATGAGGTGGTGGCAGGATTTGCCGAAGTGCAAC 514 37 100.0 34 ..................................... GTTCGCCTCCACCCAGTACCGGAGACCGTCCGGC 443 37 100.0 30 ..................................... CGGCGAGGATGGCGCCGATTTTGTCGGCGC 376 37 100.0 34 ..................................... GCTCAGCGCTTTCGAGGCTGTAGACCGTGCCGGG 305 37 100.0 33 ..................................... ACCCTTCAGGGTTTCGACTTCATTCCCGTCGTG 235 37 100.0 34 ..................................... GCGCGCACCTTGCGTGCCGGCTTGCGTGCCGGCT 164 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== =================================== ================== 9 37 100.0 33 GTCTGACTGGCTTCCCTGATTTCGAAGGGATTGAGAC # Left flank : CGGGGCCTCGCCCGTGCCGAGCACCAGGGTGCGCTGGCGAGGGTCGAGCCGCAGCAGGAAGAAGCGGTCGGTGGCCTCGTCGATGAGCCAGACGATCTGCTCGAGCACGCGGCGCTTCTCGGCCTCGGTCAGCCAGATCTCGTGCACCGACTTCTGCCCGCCGGTGGCGAAGCCCCGCAGCAGCTTGAGCGCACCGGCGCGGCAGCGGTTGTCGCGGATGTCGTAGGCGGCCAGGTAGAGGTGGCGCAGCGGGGTGCTCATTGGGAACAGGCTCCGGTCTTCGCAGGCCTTCATAGTCGCCGCGAACCGGTCTGCCGACTTCCGGCGGCAAGGTTGCCGCGCCCGAAGTGAACACGCCCGCCATGCCGCTACAATGCGCCCTGCCGGTTCAGACCAGCCTGTGGACGAGCCCCATGCCAAGAGTCAGCTTTTCGCTCCGTCTTTTTGTCTCCAAGCACCCTTGCAAGTGCTTGTCAGCATTGAACAATTTCGAGCGCGGG # Right flank : CCGTCGGCGCGGTCCAGGTAGAGGCCGAAGGTCTGTCTGACTGGCTTCCAGGGCTGTTCACTTCTCCCGGACGCCCGCATAGCCCAGGATCCGCTCAAGGCACAGGGCATTGCGATAGAGGGCTTGAG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGACTGGCTTCCCTGATTTCGAAGGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.00,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [35.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA // Array 1 81-320 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPKQ01000043.1 Sphaerotilus natans strain JCM 20382 sequence043, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 81 33 93.9 35 ....G..........T................. GGGTCTTTTCCGCCTTTTCCTCGGCGATCTTGTCT 149 33 93.9 36 ....G..........T................. GCGACTTGATCGCGTCGCTGTAGGCGTTGGCGGTCT 218 33 100.0 37 ................................. AACTCATCATCACTCATGTCCGTGCAGTCCACGGTCT 288 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ===================================== ================== 4 33 97.0 36 GACTTGCTTCCCTGACTTCGAAGGGATTGAGAC # Left flank : TCGTCATCCCGCTCTCGCTCCTTCTGCTTCGTTCCGCCCTGTAGTTTGGGGCATCAGCGAATCAGAAGTGAACAGCCCTGG # Right flank : CCAGAAACAGGTCTGCTGCCCGGCACATCGACCAGCCTCGGCCTGGATAAAAAACTGGGGGCTTTTCCCGTCTGAGAGGACTCTGAGCGAATGAACTATTCCATCAACCACAGGAGTCACTGGCCACAGCAGGCCACGGCATGCGAACCTCGCCCATGACACGCAGTCGAGGCCGTCCCAGCATCGACGTGCATCGGCACCGCACCTTCCCCCACAAAAAAAGAACCGCCCTGCCCTGCCCGCCCTGCCCAGGAGGCAGCGCGGGTGGGGTGGTCTGGTCCTGAACGGGGTGGATCACGCGGTGGCCGGTGCGCTCTGGCGTGCTCGCGCTTCCAGACGATCGCCCAGCCGATCCGACAGCGAACGGCGCGGTGGCGGCCGGTCCTGGTGCTCCGCTGGCGGATGTTCCGGCTCGGCACCCTCCGGGTAGAACTCCTCCACCACACCCAGCCCCTCTTCTTCCGACTCCTCGAACGCACCCTGGGCGTAGCCCTGGCGGG # Questionable array : NO Score: 2.71 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GACTTGCTTCCCTGACTTCGAAGGGATTGAGAC # Alternate repeat : GACTGGCTTCCCTGATTTCGAAGGGATTGAGAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.40,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [45.0-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA //