Array 1 79578-82037 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNOT010000001.1 Bifidobacterium adolescentis strain 1001262B_160229_D10 NODE_1_length_1662410_cov_65.2313, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 79578 36 100.0 36 .................................... TCATCACCCAGACCATGAGCCAAATCCAACAAATCT 79650 36 100.0 35 .................................... TGGTCAACGCAATCGCCGCGTTATAGCTTGACGTG 79721 36 100.0 35 .................................... GAGGCTGTGTCCGCCATCAACCGGATGACGATGTT 79792 36 100.0 37 .................................... GACGAAGATTCTGCTCGGCAATGTCAAAGGCCCCAAG 79865 36 100.0 34 .................................... ACGCCGCCGGACCCCCATGTGGTGCCGACGATGA 79935 36 100.0 34 .................................... ACGGCGTACAGGTCTCCGTTCGGGTCGACCTGCA 80005 36 100.0 35 .................................... TGTGGCAATCATCATTATCGGAGGCGGTCGGAATG 80076 36 100.0 37 .................................... AGTACCGGACGCCTCCCCAAGCGAATAACCGAAACGT 80149 36 100.0 36 .................................... TAGCCATATCGGGCTTCCGCCGTCAACGTCCGTATA 80221 36 100.0 35 .................................... ATGTTGCAAAACTTTTCCCTGATGTGATCCACCAC 80292 36 100.0 35 .................................... AGAATCAAGGAAGACGTTTACGCCTACCTTATCCA 80363 36 100.0 36 .................................... CTGCTCGGTCGCATTGATACTCCGTGGCCGGATCCA 80435 36 100.0 35 .................................... GCGTCTAAGCTTATGAGCGTGTTGGCAACCGACGT 80506 36 100.0 35 .................................... TCACTTGTGCGTACGCCTGAAACACCGTTGACGGA 80577 36 100.0 38 .................................... GACACAATTAGTGTCGCACGTGGTACCTGACGTGCTGG 80651 36 100.0 35 .................................... CGTTGAAAATGGAACGGCAAACCGCCGACGAAATA 80722 36 100.0 33 .................................... GGCGGAGTTCTTCGCCAAAACCCTTGGTGTTCG 80791 36 100.0 37 .................................... TATCTTGTGGCAAGAACGTATAACCCGCGATATTGTC 80864 36 100.0 36 .................................... GAAAAAAGGCGCGTTAGAATACTTGTGAGCCTTGCG 80936 36 100.0 36 .................................... GCTCACCTCGCACATGGGTACCGGTGGCAACAATGT 81008 36 100.0 35 .................................... CCAAGGGTATTCCGCGCCCGCGCCCATGACGGCAA 81079 36 100.0 36 .................................... CGGACGTACACGCGATAATCAAGCGTTCAACCAACT 81151 36 100.0 35 .................................... TTGTATTGCGACGCTTGAGCGAACGGTACTGGTAA 81222 36 100.0 33 .................................... GAGCAAACGCAACAACGCGCGTAAGGCATCCCA 81291 36 100.0 36 .................................... GCGCCCTTAGCACTGATATAGATTTGCGCGTCATTG 81363 36 100.0 34 .................................... AATCTGAAGCTTCAGGAGGAGATTCAGCTCCTGT 81433 36 100.0 35 .................................... ATATAGGAGCATCACGCGTCTTTCCAGCAGGATGG 81504 36 100.0 34 .................................... GTGCTCGGCGCCTGAGCCGATGCCGCCGACGCGG 81574 36 100.0 36 .................................... TGCGCAGACGGCAACTAGCGTGTATACGCTTGACTT 81646 36 100.0 34 .................................... GCGGCCACTTCCTACGATTCGGTCGCGGGCGCTT 81716 36 100.0 37 .................................... GACACGGGCACGCATCCAAGTGTCCTTAAGCCGCGAA 81789 36 100.0 36 .................................... CTGAGCCCCTTGTGCAGCTTCTCGGTGCGGCACCAG 81861 36 100.0 34 .................................... GCGGGCGAACGCGTATGCAGACGCGGCACCGCAG 81931 36 100.0 35 .................................... CCCGGCGACATGCCAAGCGAAGTGCCGAACCAAAG 82002 36 88.9 0 .........T......A...G...T........... | ========== ====== ====== ====== ==================================== ====================================== ================== 35 36 99.7 35 ATTCCTGAGCATTCAAGCTCAGGACTTCATTGAGGA # Left flank : ATCTGGTGGCATATGATATCAGCGATGATTGCTGCCGCTCACATGTTGCGAAAATTCTTCAACACTATGGAGAGCGATTGCAATATAGCGTCTTCTTACTGCGGGTACGTCCTTCGATGATGTTGGATGTCCGTATGCAGATAGAGAAGGAAATAGATGACTCAATCGATTCTGTTGTGTTCTGTTCTCTTGGAACCATTTCTCAAACGGAAGAGGGCTTGGATTTCTTGGGGCGCCGTGGATACGTCGATTTAGAGATACCGACAGTGATTTGAAGTTTTAGCCTAATGGCGATGTTGTTTGATAAGTAAAGAGTGTTTTGCTGTTTTTCAAGTGCGAGAGATGCATCATTGCTGCGACACACGGTGAGCGCTCGCACTTGAAAAATAGTTGTTTTGGAGCCAGTGAACTTATATTGCTTCTGTATTGCGATAGAAATGAAAGAGTCGCTCGCAAAAGCCTTTAGAATATGTGTCATTGTAAGGTCTTAGACTATGACT # Right flank : AGCTGTGGGCGAAGAAGCGCAACCGTCTCCAGTTTTTTGGATTAAAGCCAATATTCAGAGGTCTATCCAAAATCGCTGGATGATACTGTCTTCGTTCCGTCCCGTACCGTTCACGATTTCATTCTCCATCTTTCCACCATTGCTGATAATCGTCCGTCTTGATGCTTTATTGCTCTTGCGACAGGTAAGTAGAACACGTTGCTCGCCCTGCTCTTTGCAGATGGGCAGGAGTAAGGCGAGCATCGCTTTGGCATACCCTTTTTGACGTTCCGATGGCAAAATGCTATACCCAATATTTCCTCCGTATTGCAGCAGAAAAGGGGATAGCGGACGTCTGAAATCAATGATGCCGACGAGCTTGTCATCCGCCTTCCGAATAGCTAAAAATACTTCCGACGGCACATAGCCTTCGCCGTATTTCTTTTTCAATCGATTATCGAAATCGATCCATTCATCAAAAGAATCCGTGTCTTCGAGACCGGCGCATCCATCGAGACTGT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCCTGAGCATTCAAGCTCAGGACTTCATTGAGGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-6.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA //