Array 1 23964-23532 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV808768.1 Streptococcus sp. HMSC077F03 Scaffold91, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 23963 36 100.0 30 .................................... CGAATCCTGAATTACACTCTAATAATGAGT 23897 36 100.0 30 .................................... ACTTACTTTCGAACTGGAACACGATTATGG 23831 36 100.0 30 .................................... AGCCATTAATGAAATTGTTTAAAAGAAAGG 23765 36 100.0 30 .................................... AGCTCAATCATTTCATTTGTTTTAGATGCT 23699 36 100.0 30 .................................... CAAACTTTGAGTGTGAGGAACTTAAGTATG 23633 36 100.0 30 .................................... GGGTTTTATGCCACGGGAGAAAGCAAGCCG 23567 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 7 36 100.0 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : GGATGATTTTTTATCCTATAATGATTTTGTTGAATGTTGCGAGAAAATGGAGTTTCTTACTAATCATAGTAACTCATTATATATTGTGTTGTTTCCTTCAAATGAAGGTTATCTTCATGTAACTAAAGAAGTAATCGAGGAGATTAATATCGTTTCTGATTATGCCGATCATTTTTATTCTTTAGAATTTATGTATGAACGATTTAGCAATCAATATCCAATAAATCAAATACCTGATGAACAAGACTTTTTAACTTCTTTAAGAAAGGTTGGCCCCTATTTATTTAGTTCTGACATTCTTCATATGAGTTTATCTATAGAGGATCAAGTAGCATTAAAGATTTTAAACAAATTGTATCAGTATGAAATGAAAACAAAATTCCGTATTGAAGCGGTCAATCCAATGTTATTGAAATATTTGAAAGAATAGTATTGACGAGCGAGATTTAAGGCTTTATAATGTTTTTGAGGGAACAAAAATCAAAATTGACGAATTTGCG # Right flank : CGGAAGCCGTTAGTAGTATCATACAGACGGGTTTTTGTACTCTCAAGATTTAAGTAACTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTACTCTCAAGATTTAAGTAACTGTACAACAGACTAAATTGGATCCAGGATTAGCAATTGGAACGAAAACGCTCTTTTTAATTTCTTATGGAGTAGCTCCCCAGTATGATATAATGTCATTTAGTAGCAACCAGAGAATAGAGGAGCGGAAACGATGCTAGCTATTTGTATAGATTCTATAGGTGACAAGTCAGGAACCTATAAGTTGTTAAGAAATTATTCATCCTTGCCTTTCTCTTTAATCCAATCCAAAATAAATGTTCATAACACGGTAATAGAAGTAGACATGTTAGATTTGGACGAATTGAAAAAGGTTAGAGCCCTCATCCATGAGTTGAGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : TGTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: R [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.5 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 1 294-61 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV808751.1 Streptococcus sp. HMSC077F03 Scaffold9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 293 36 100.0 30 .................................... TAAATTAGTATCATGAAGAATAGCAGAGCG 227 36 100.0 29 .................................... CAGCAGAAACGGCGTATTTTGTGCCAACT 162 36 100.0 30 .................................... ATAAAAAGAAATGTTGATGATGTGAACCAC 96 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 100.0 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : TTGTACTCTCAAGATTTAAGTAACTGTACAACTGGGGCAGATATGTTGTTTACTCGTTTAG # Right flank : CTCAATGGAATTTCAGGCTCTCGTCCAACCGGTTTTTGTACTCTCAAGATTTAAGTAACTG # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //