Array 1 206449-207210 **** Predicted by CRISPRDetect 2.4 *** >NZ_MNPS01000003.1 Saccharibacter sp. M18 scaffold_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 206449 29 96.6 32 ..............T.............. GCGTCATCCGTAGATAGGGAGTTTTCAAAATC 206510 29 96.6 32 ..............T.............. ATCGAGACCGAAGGGGAGCCAACCCCGGGGAA 206571 29 96.6 32 ..............T.............. TCTGACTTCATTGATGGGGCAAATTTGCTTGG 206632 29 96.6 32 ..............T.............. CGATGCCTGGCCCAGTTCTTGAGGAAAAATTG 206693 29 96.6 32 ..............T.............. TCTGGAAAACCAAAGGTAAAAGAATTTGGTGC 206754 29 100.0 32 ............................. GGATAAACATGACTGTAAAATACGCTCTCGCT 206815 29 100.0 32 ............................. TGCTAAACAAGAATGTTGTAGAGCTTCTACAG 206876 29 100.0 32 ............................. GGCCATGCTCACGACAGCGCAGGCGGTATCCT 206937 29 100.0 32 ............................. GGGCGGTAACGGGCGTTGGTGGGGATGAAACG 206998 29 100.0 32 ............................. TTACTTGGATGTAGCTCACCATTGCCTTTCTC 207059 29 100.0 32 ............................. GACGCAGGGCAATGGGTCCGGCCTGCACGACA 207120 29 100.0 32 ............................. CCTGTTTGAGAGGGGGTGCCGCCCTCTCTTTT 207181 29 100.0 0 ............................. | T [207208] ========== ====== ====== ====== ============================= ================================ ================== 13 29 98.7 32 CTGTTCCCCGCCTACGCGGGGATGAACCG # Left flank : GACCCGTATCGTGTACTGCATGGCCCTCCTGCTGGAGCTGCTGCGGGGCAGGAATGAAAAAGGCGAGAAAATTGCGCTTCAGGAGCCGTTCCTGACGGCAGAACAGTTGAACATTGCTGCCTCTGACGATTTTGAGGCTTCCATCGGTCTGCCTGCTTTCGACAGCTGGCGTGATCTTCTGACCCCAGAGATTAAGCAGGAGATTGTGCGTGATCGGGAGCTGATCCGTCAGAAGGGTGTTCTGGCCAGCCTGCCCGTGTGATGAGGCGTTGAAAATTGATTGTGTGTAGAGAAAGGGAGGCTCCAGCCTCCCTTTTTCATGTTTGCTGTCAATCTTGTGGATAAAATTTTCTGGAGTGGTTTTTGGCTGTTCAGCGTCTCAACTTCCTTCTGTAAGGGCCGGAGGGGACTTGCCTCGGCGAGGTCATTAAAATTATATTTAATTCGGTAAGTTCTTTGACAATTAAAAAAGACTTATAATACAAATGGTTACAGGAAGT # Right flank : GGTGCCAGACCGCCATTACTGGCCTGTGCCGAACTGTTCGCCGGTGGGTCATGGGGTGGTTGGTGGCATATGTGGTCGCCAGAGCCATTCCAGAGCTTCGGGAAGGGTCTGTTCGATGGTGGGGCCATCCACATGCTGGGCATTGCGGGCAAAGACAAATTGGTAATCATAGCCCTTGTCGGCCAGCACGCGGGCCATGTTTTCCCCAGCCAGCACCCAGTCGTGCATGCCATCAGGCATGGACGGAACGGGGTAGAACAGGTCCTGGTCGCCTACTTCGTACCAGATATGCAGCGGGGCCAGTGGTGCCGCCGGGATGAGCGCCGCACCGGGATGGGGAGGTACGGCTTCCGGTGTTCCGGCCCATGGGGAGTGAAGCTGCCATCCCCCGCCGGGCAGGGCGGGGTCGTGCGGCCATTGCTGGTTGACAAGCGAAGGAGAGTAGGCCAGCACCCGGTGATAGAGGTTGGGCCGGAACCAGGCCATGGCAAAGGCCGCTG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCCTACGCGGGGATGAACCG # Alternate repeat : CTGTTCCCCGCCTATGCGGGGATGAACCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGTTCCCCGCCTACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 791992-791169 **** Predicted by CRISPRDetect 2.4 *** >NZ_MNPS01000001.1 Saccharibacter sp. M18 scaffold_0, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 791991 29 100.0 32 ............................. GCGTGGCCTCACCTGCATGTGGGGTTCGTGAG 791930 29 100.0 32 ............................. TCGTCATTCAGGCTGTGGCCCGGAGCCATCTC 791869 29 100.0 32 ............................. ACACAACAATTTTTGATTCTTTGTTCATAACA 791808 29 100.0 32 ............................. TCACAGGACAATTCAGGCGCACAGTACAGCGG 791747 29 100.0 32 ............................. GCGTTATAGAACGGGTGGTATGCATCACCCGC 791686 29 100.0 32 ............................. CAGGTAGACACCTATGGCCAGGGCGGGGCTGA 791625 29 100.0 32 ............................. TCTACACGGGGGACCATCAGGGGCTTTCTGTC 791564 29 100.0 32 ............................. TGCCGGGCTGGGTGAAAACAGCCGCATATACA 791503 29 100.0 32 ............................. CAGCGAGCAGACGCCGCAGCAGTCCCGTTCCG 791442 29 100.0 32 ............................. ATGAATCGTCCGCACCAACATCATAGTGCCGA 791381 29 100.0 33 ............................. GATACAATTTCACGTGTCCCCGGTATTATACCG 791319 29 100.0 32 ............................. TGTTGCGAATGATGAAAAAATTAGCTCTAAAT 791258 29 96.6 32 ..A.......................... TGTTTCAGTTTCTTTTGACTTAAAACGCGGTG 791197 28 86.2 0 .....................G.C.-..A | C [791175] ========== ====== ====== ====== ============================= ================================= ================== 14 29 98.8 32 CTGTTCCCCGCCCATGCGGGGATGAACCG # Left flank : TTGGAGAGAATCATTCCGACCATTGAGCAGGTTCTTTCGGCTGGCGGTCTGCCTCGCCCCGAGCCCCCACCGGAGGCCGTGCCCGTCGCTTTTGAAGATGAAACCTTTGGCGATCCGGGGCAACGTTGATGCTGGTTGTGGTGGTCACCAATGCGCCACCCCGCCTGCGTGGCCGTCTGGCAGCATGGCTGGTGGAAATACGGGCTGGGGTCTATGTGGGCAGCTACTCCAGACGGACAAGGGAGATGATCTGGGAGCAGGTACTGCTTGGCCTTGGGCCTGAGGGTGATGCTGTCATGGTTTGGCATGTTCCCAACGATCAGGGATATGAGTTCCGTACGGCTGGTCACAATCGCCGGATGCCGGTTGATTTCGATGGATTGAAACTGGTTGCTTTTCGACCGGAATAAAGCGAAGGAGTGAGGTATTAAATTCTGGTTTAAGTTGGTACGGTCTTTGACAATAAAAAAAGTCATGTCTTACAGTATGTTGCAGGAAGT # Right flank : TTATTGAATGTCTTGATGAAGGCTGTGGCTTTACCTATTATCGGTGGTGCAGCGTATGGTGATCAGGCGATATTCTGCCGGCCTGGGCCGCCCGTTAGGGTAGTTGTGTTATTGTGGGGTTTGCGGCAGGCCCCACCCATACGCTGTCTTGGTTTTTTGTATTCGGGAAGCTTCGCCCGGTGATGCGGTGGCGGGGCCTGCAATGAACCCCGCAAAGCGCCACGTGGCGGGTTGCCACAGCTACGGCCTGCAGATTGTCACCGTGTCGCACCGCATCGGCAGCAGTTGATGTTAATGGGAACGTGACGTCAAGAGCTGTTATCCTGTACGGCAAGACAGATTTCCTGTAGTTTTTCTGCTTTGTTTCACCATCGATATGAGAGATCACCAAACAGGGCACGGCCAGGAGCGTAGGAGCAGTTGGTCGTGCTGGTACATACGGAAACATATTTCGAGTTGGCAATGTTTGTGCCATTCAGCTGGAGGTGCCATCTCCGGTA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCCCATGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGTTCCCCGCCCATGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-12.00,-12.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 170518-171346 **** Predicted by CRISPRDetect 2.4 *** >NZ_MNPS01000005.1 Saccharibacter sp. M18 scaffold_4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 170518 36 100.0 30 .................................... GGATGTCCCTGCATGTCCATGACGGTATTG 170584 36 100.0 30 .................................... CCAGCAGCTCTATGCCGATGCGGGCCGCTC 170650 36 100.0 30 .................................... CTGATCGGGTTGCTCATGAAGCCCCCAGTG 170716 36 100.0 30 .................................... CGCCCAGACCCGTGAACGTGTCGCTGCCAG 170782 36 100.0 30 .................................... GAAAAGAGCATCTGGGATGCTTTGACCGGG 170848 36 100.0 30 .................................... ACATCAAACGGTGTCACCCCCTTGATATTG 170914 36 97.2 30 ......................C............. GTCTTTGGGGATGTGATTCAGATTCGTTCT 170980 36 100.0 30 .................................... GTTGAGGTCGGATGTGACCAGCGAGCCGGA 171046 36 100.0 30 .................................... ATCATGAATGAACTGGTGAAGTTCGGCGCG 171112 36 100.0 30 .................................... GCCAGCCTGTAGATCTAAAGCCATTCTGGA 171178 36 100.0 31 .................................... GCAGCAGGGCGAGTTGTTTCTGCCATGTCTA 171245 36 100.0 30 .................................... TTCCGCATCAGCCGCAACCCACTCATAAAA 171311 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 13 36 99.8 30 AACCTACCATAGGCAAATCGGTAGGGAAACCACGGC # Left flank : ACCATGACTATTCTTGCAGCGACTGAAATTGTTGCCTCTAACCTGGTTAAAGCCCTTGAACATAACAGTGCTGCCTTACTGCGCCTGCCTGTCTGCATCGCTGGGGGTAGCTCATGAAAGCAGAGGAGACCCGATTCTTGTGGCTAATAATCTTTTTCGACCTCCCCGTCCGCACCAAAATTCAAAGACGGCAGGCAGCGCAGTTTCGTAATTTCCTACGTGATGATGGATTCATCATGCTACAATATTCCGTCTATGTTCGTGTCGGACGGGGACAAGACAGTCTCGATAAACATTTACGCCGGGTTCGGACCGCCCTCCCTAAAGAGGGAAGCGTCCGAGCTTTGCAAGTAACGGACAAACAGTATGGAAGGATGGAGATTATGCTCGGCCTTGCCAAAAAAACCGAAGGAATAGGCACGAAACAGATGGTGTTGCTATGATTTTCGATTGTAAAAACAATGAAAAATCATGCAACATCAATCTGTTACGCAAGAGCT # Right flank : GCGATACGGCCTGGGTCGGCCTACATGTCAAACCTACCATAGGCGAGTGGCTAGAGATCCAGGCGAGCTTAATCCAAGCGATTTGGAGTAATGTATTTTGTTTGGGGAGGGTACTTTTGGATGCGGGGGTAGGATTTGAACCTACGACCTTCAGGTTATGAGCCTGACGAGCTACCGGGCTGCTCCACCCCGCGTTGGTGGGTGGTTTTTATGGTGGTGGGTGAGCGAGGGGACCTGGCGGCGACCGACTTTTCCGCTCCTTAAGGAGCAGTATCATAGGCGCTGGAGGCTTTAACGGCCGAGTTCGGGATGGGATCGGGTATGGATCCTCCGCCATGGCCACCAGGTCTTCCCGCTCACCCATGTGGGTGTTTGGGGGTGTTTTGGTTGGTGTTTTCTGGAGTGTGACTGACTAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AACCTACCATAGGCAAATCGGTAGGGAAACCACGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [13,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.90,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA //