Array 1 81384-82278 **** Predicted by CRISPRDetect 2.4 *** >NZ_NDXH01000045.1 Lacticaseibacillus paracasei strain DmW_181 NODE_45_length_143215_cov_4.998170, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 81384 36 100.0 30 .................................... TGATCACCGTCTTGAACGGCCACTTGGCTT 81450 36 100.0 30 .................................... ATACCAAGGCGGTGGCATGGCGTATACTGA 81516 36 100.0 30 .................................... AGAACTGGACGCCGAACGCTTGGACACGCC 81582 36 100.0 30 .................................... CCCTTTCGCCGCCATCTTTGATCGCCCACG 81648 36 100.0 30 .................................... GCTATCTGGCTTGAATTCCTTAATCGATTT 81714 36 100.0 30 .................................... AAGCCGATGATATAAAGAAAGACGCCCCTT 81780 36 100.0 30 .................................... GAGGCTTACCCCGTCTTTACCAGTTGGTCC 81846 36 97.2 30 ..............C..................... TTGTTCATAGCAGCGTTGGCACGGGTATTG 81912 36 100.0 30 .................................... ATGAAAGCCAGCGAAGGCACATTTTTTACT 81978 36 100.0 30 .................................... AACGTTGACCGCTCTGTCTCACGAAACTGG 82044 36 100.0 30 .................................... GAACTTTGTATCGTTTCTCTTTGCGCACGG 82110 36 100.0 30 .................................... ACGTTAAACGTACACCATGCCGCACAGTCC 82176 36 100.0 30 .................................... GACGATCTCGCACATGCTCAGTGATATGCG 82242 36 91.7 0 ..........................T..A....C. | T [82274] ========== ====== ====== ====== ==================================== ============================== ================== 14 36 99.2 30 GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC # Left flank : AGCTTGATCTAGATAAACTTTTTCAACGTCTAATCTATAAGAGGATGGAGTTGCTGATTGAGAATCAGCGGCTTGTCGAACTGATCGATCAATCGCAACAAATGGCGATGGATTTAATTCAAGATCCATTCTTGAGCGACTTGCCAGTCACGGTTGAACCAGGCGGTAAGCTCGAACAAATCATGAAATACTGCAACGTTCATTTTGATGAGACTGTCACGACAGAGTCAACCTCGAAGATTGAGGCGCTTATTCAGACGTTAACTAAATTGGAGGAAATGAAACTTGTCATTCTTACAAATGTCAGTCATTATTTAAGTGCCAGAGATTTCTTTGCGGTGACTGAACAGATCGGCGATACAGAACTTCAGGTTGTTCTCATTGAGTTCTCAAAAGTGAACCGAAGGAAATACTTTGAGAAATGCCAGTATATCTATATTGACGAGGACTTCGTTGATAGTCGCGAACTAGATTGATTAGGAGATTGTGTGAAAACACCA # Right flank : CCATAATTCCGAGAAAATGAATTGGCGGATTTTAGAGTCAATCTCATGCTAGAAATAACCAATTCCGCAACTTTAACGTCTTCGGTCTGGTTAGCGTTCGCAATATTGATGGCTCTAGCAACTCAGGTAATTGCCGGTGCGGTTTTCGTGGACCGCTAACATCTTTATTATGCCGTCAGCCATGCTTCAAAGTTAGGGATGTCTTTAACGTACCTGCTGGTGTTGACTATGACATCTGCTACTCAATTAATATTGCCGATTTGCTGACTACACAACTGCCTCTGTAGTGGGAATATAGGCAGTGACGCCTGTAACAATATGATTTAACATTCAAGTTTCTTCAAGGGAAAACATATGCGAGTGCTCATGTCCTTCAAAATGTTTGATGACTGCGAACATCATCGATTATTGTGAAACAGCAGGCATACCTGTCTAAACTTTTTTCGATCAGTGCTTAATTAACGAAGTTCTTCTGTGTCAGTCGCAACCTGAGTTGAGAG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: F [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //