Array 1 13890-9523 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABVBM010000075.1 Acinetobacter baumannii strain KCJK8620 NODE_75_length_13911_cov_8.113102, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================== ================== 13889 29 100.0 31 ............................. TGTAACAACTTTAATGGAGAAGCCTTAATCT 13829 29 100.0 31 ............................. GAACGTCAAATTTTTGCGGACATCGAAGGTC 13769 29 100.0 31 ............................. GCAACTGTTGCGGGTTATTGGGATTCATTGA 13709 29 96.6 31 ............................G TTACCCGAGTCTTTAACAAGTGTTGAAGTTG 13649 29 96.6 31 ............................A TACCGTAATTCCCAAATCCTAGAATGTAGAA 13589 29 96.6 31 ............................A TAAAATTAAGTAGGTCAGCAGATACGCTATT 13529 29 100.0 31 ............................. GAATCAGTTGTATTTGATTACGGTATTGGTC 13469 29 100.0 31 ............................. TATGAATCTGTGCCAACTCACTATACGGGTA 13409 29 96.6 31 ............................C ATCCCATACGTGGCATACCATATGTAAGCCC 13349 29 96.6 31 ............................A ACACCTCAGCACATTTCTCTATATATTCATT 13289 29 96.6 31 ............................A ACAAGCTTAAATAAATTACCCACCTTTAGCC 13229 29 96.6 31 ............................A ATGAACGTGGCGGATAATCATTAAAGTCATC 13169 29 96.6 31 ............................G ATCCGTTGCAAAAGAAAGTAGATGAATGTGT 13109 29 100.0 31 ............................. TTAATGATGAGAATTTGGATTATCAAATACT 13049 29 100.0 31 ............................. ACTTTAGAAGCAGTTGGCGAAGCTTCAGCAA 12989 29 100.0 31 ............................. TGATGATGATTCTCTAGTTGACCAATCTAAA 12929 29 100.0 31 ............................. GCTCCACCTTTACTTTGTTCAACGAATTGTA 12869 29 96.6 31 ............................C TTCAATGTGTTTAAGATCGGGTCAAAAGCTA 12809 29 96.6 31 ............................G TTATGTGGCATATACGCAACAAGGTACGATT 12749 29 96.6 31 ............................A CAGTAGTATCATTTCAATCGAGTAACGTTGA 12689 29 96.6 31 ............................A AAAAGACCCAAAGAAATTCGCTCGTTTCTTT 12629 29 100.0 31 ............................. ACACGGCGATCTTGTTTAATAGTCTGAGTTT 12569 29 96.6 31 ............................G ATAAAGGTTGTATGCGCTCTAAAGCGTTAGT 12509 29 100.0 31 ............................. GTAGGTGGCATATCACAATAAGTCGCACCAT 12449 29 96.6 31 ............................A TTAATAAGATGGGGGTAAAGGTATCCGATAC 12389 29 100.0 31 ............................. TTATGCTCAATGTTTGGAGCACGGTTACCGA 12329 29 96.6 31 ............................A TTTATGAAGCTCGTAGAAATCGACTTTTCCC 12269 29 96.6 31 ............................C AATACAAACATTTGACTGCACATCTGGAACA 12209 29 100.0 31 ............................. AGAAAGCTTGGAAAACAAAGGTGACTGTAAT 12149 29 96.6 31 ............................C CGCACAAGATTACATAGACAAAGTGCTCGAT 12089 29 96.6 31 ............................A GAAACATCTGTTATTTTTATTGATGAGGTAC 12029 29 96.6 31 ............................A CCCTTTGGATTGAAGACTCTGCTTTTGCTGC 11969 29 96.6 31 ............................A TTCACCAGCCTCGGCTAGACTTGATGCTCCT 11909 29 96.6 31 ............................A AGCAAAATTCAAAAGAATTACCCCAGCCAAG 11849 29 100.0 31 ............................. TGGTGTGCCTGCGCCCACTCAAGCCATGATT 11789 29 100.0 31 ............................. TTAACCGAGATCAAGAAGTAATTGCTTGGGC 11729 29 100.0 31 ............................. ACAATACGACGTGATAATGCAACTAAAGCCC 11669 29 96.6 31 ............................A CGGTAAAATTAAGTTACCTGCTAAACTTGTG 11609 29 96.6 31 ............................A ATCAAAGCCTTAATCGCTAAATCAACTGCTA 11549 29 100.0 31 ............................. TTTGTTTATACGGTTAATAAATCAGTACAAT 11489 29 96.6 31 ............................A TTACACAGGCATGGCAATGAAAGTGTTCTTT 11429 29 96.6 31 ............................C CTCGTGGAAAAACTTAAAAGCCATCTTCGTA 11369 29 100.0 31 ............................. TCATCTAAATGTTTTTGACGTTCAGCTTCAG 11309 29 100.0 31 ............................. AGACAGCTCATTTAATCCGGGTGAGAAACAG 11249 29 100.0 31 ............................. GCTTGGACCCATGAAATTAAAGGAACTTTCC 11189 29 100.0 31 ............................. AGATAATGTTGAATGGGTTGAAACTACCTAC 11129 29 96.6 31 ............................A GTTCAGCATTCCCCTTCGGGGTCAACGTCCA 11069 29 96.6 31 ............................A TTACCCCTCCTTACTTTCTGCTTTAACTTCT 11009 29 96.6 31 ............................A AAACACCAAGCCATAAAATTAATTACAGCAA 10949 29 100.0 31 ............................. GTTTTGCTAATTTATCAATATCGATTTTCAC 10889 29 89.7 31 ...AC.......................A CAGGGGTCAAGTTCAGAAGATTTACGTTACA 10829 29 82.8 31 ...GC.......CC..............G GTATTAGTGCGAATTGGCTTTTAGCCCACGC 10769 29 93.1 31 ....C.......G................ TAAATGCTCAACTATTTCTGTAGCTAATGGA 10709 28 86.2 31 ...GC....T...-............... TCAAATGATTTAATGAGCTTGTAGCTATTTT 10650 29 86.2 31 ...GC.......T...............A CGTCTTCTAATGATGGACTTTAATCCAATAT 10590 29 79.3 31 A..GA.......TC..............A TCTCACTGAAGATATGACCATCACTTTCTTC 10530 29 79.3 31 ..CGC.......CC..............A AGCCATTTACTTTGATAAAGCGTCACATAGC 10470 29 100.0 31 ............................. AGGAAATTCTATCGGCCCAGCATCTACAAAT 10410 29 96.6 31 ............................A AGAGACACATCGTTAATAATCTCTTGTGCGG 10350 29 96.6 31 ............................A TGAGCAAATTATCAATTGATCTATCTGCAAG 10290 29 93.1 31 ............CC............... AGACGGTGTTACCTGTAGGCGGTGTCTACTG 10230 29 86.2 31 ...TC.......C...............A TCGTTTGAATAATATGGACAATCCAGCCAAT 10170 29 86.2 31 ....G.......TC..............G CAGCATCAAACGAGATATTGGCTAACATATT 10110 29 79.3 31 ...G......A.CC...........C..C AAATAGTTTTAGCTATCTGAGCATTTAATTT 10050 29 93.1 31 ....G.......C................ TCATCACGTAGCCTTTTACACGCATCTTGCG 9990 29 96.6 50 ....................C........ GTACGCTGAGTATTGATATTGACATTCAGGGCATTCAGAATTTGGCGCTC 9911 29 89.7 30 ....G........C..............C CAGTTTGCTGAAAATCACCAATACGGTCTT G [9885] 9851 29 79.3 31 ...TC......TCC..............G ATTCTATGAGCGTGACCATGACTCTATTTAA 9791 29 86.2 31 ...GC.......C...............A TTATCCAGATAAAACCATATCTACAAAGTGG 9731 29 93.1 31 ....G.......................G ATCATCTACAGTGATTGAATAAACGGTTTTT 9671 29 82.8 31 ...GC......TG...............C AACGACGACGCCGTGTGTTTGTTATCGGAAG 9611 29 79.3 31 ...GC....T..TC..............C AAGTAGGATTTGCAGCCCCAATAGTCTTTAT 9551 29 79.3 0 ....G....T...C.A........AT... | ========== ====== ====== ====== ============================= ================================================== ================== 73 29 94.8 31 GTTCTTCATCGCATAGATGATTTAGAAAT # Left flank : AGTTTACGGCAATCAGATTGG # Right flank : TTGAATCTTAAAAAGAAAAAACCCCGAAACTTACGTTTCAGGGCTTTTTCGAATCTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTACAT # Questionable array : NO Score: 5.51 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.45, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [50-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //