Array 1 2165148-2163180 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_BLKS01000001.1 Mycolicibacterium agri strain JCM 6377 sequence1, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence                                	Insertion/Deletion
==========	======	======	======	=====================================	===============================================	==================
   2165147	    37	 100.0	    38	.....................................	GTTCGCTTCTAGGCGTGCTTGGCATCGGCGGCGTTGAG         	
   2165072	    37	 100.0	    36	.....................................	TCGCCATGGGTTTGCTCATGACGACCGAAGGCATAC           	
   2164999	    37	 100.0	    34	.....................................	GGCGTGAACCGCTTGCCGGCATCGGCGGTCGTGA             	
   2164928	    37	 100.0	    37	.....................................	GCGTTGCCGTCGGTGTACGCCTTCTGCTCAGCGGTAA          	
   2164854	    37	 100.0	    38	.....................................	AACGGCTCCACGATCGGGTTCGGCTCTGCTGTGTTCTA         	
   2164779	    37	 100.0	    40	.....................................	TTCCAGCGGCGGCGATGAGTCCGATGCCGGCTAGTGTGAA       	
   2164702	    37	 100.0	    39	.....................................	TCTCCGACAGTCACCACAGACGGCCGCGCATCGGTGCCG        	
   2164626	    37	 100.0	    38	.....................................	AGCCGGTGACGGGATTCCAGGTGTCATCCGTCCACTCG         	
   2164551	    37	 100.0	    39	.....................................	ACCTCGTATCTGAGCAATGACATCTCCGACACCCTGGGC        	
   2164475	    37	 100.0	    35	.....................................	TCGGCGGTCGGGATGGCGGGGGCACGGGTACATCC            	
   2164403	    37	 100.0	    37	.....................................	GACGGAACTCCGCGAGCTCTGCCTGCCACTGTTCGAA          	
   2164329	    37	 100.0	    38	.....................................	GTGGATTCGAGCCTTTGTGCCCATGACGCGGTCTTCCA         	
   2164254	    37	 100.0	    35	.....................................	AGCAAGGCCGCCACCTGGTCGATGCGTGATGTTGT            	
   2164182	    37	 100.0	    35	.....................................	GCGACGGCAGCGACCAGCGCGACCAGAGCGTTGCG            	
   2164110	    37	 100.0	    38	.....................................	TGCGGCACACCGGGATGCCGCGCCACACCTTCGCGGGT         	
   2164035	    37	 100.0	    37	.....................................	CCGCACCAACTGATTCGACAGTGACCGTCATCTAACT          	
   2163961	    37	 100.0	    36	.....................................	GTTCACTAGCGCGACGGCGTGCGCTGTGTCCTATGT           	
   2163888	    37	 100.0	    35	.....................................	CCTGTCGATACGGCAGCGGAGACCACTGGCCGCAC            	
   2163816	    37	 100.0	    35	.....................................	CTGCAGCGGCTGCGTGAGCTGATCGACGGCGACCG            	
   2163744	    37	 100.0	    40	.....................................	GCTCTGGAACATGCCTTGAACGGATCGCCACATCTCGGCA       	
   2163667	    37	 100.0	    37	.....................................	TTCACGTCGTTCACGCAGCGCTGGGTTGCCGGTTGGC          	
   2163593	    37	 100.0	    36	.....................................	GCGCGCACCATCACCGTGCCGTGTTTGAGTGAGTCG           	
   2163520	    37	 100.0	    47	.....................................	CAGGAGACGGTGACTTCAACGCGTTCCCGGCCAGCTACTGGCGGCGT	
   2163436	    37	 100.0	    38	.....................................	CAGGAGACGGTGACCGCGCCGATACCGTTTGCGTTCCA         	
   2163361	    37	 100.0	    35	.....................................	ATCGTGCACGCCCTGCCCGACCGCAGGGCGCTCAA            	
   2163289	    37	 100.0	    36	.....................................	TCATCCGTCGAATACGGCGGCGTTACGTACTGGTAC           	
   2163216	    37	  97.3	     0	....................A................	|                                              	
==========	======	======	======	=====================================	===============================================	==================
        27	    37	  99.9	    37	CCCGCCGCGGTCATTGCCGCGGCGCTTTCGTTGAGGC	                                               	       

# Left flank :   CGAGGCCTCCAGGTCGGCGAAGAACGGCAGACGCTCTTCGAGCGCGTGCACGGCCTGGGTGGCCAGCCGCCCCGAGTACTGGCTCAACCGGCGCAGCACCGACTCCGGCACCGACTCCAATACCTCCAGCGTGGAGGCCGGCGGGACAAACCGATTGTTCGGCATGCCTAAAAGTTACGCCATTGGCCTGTCGATTAGCTCCAAAGCTCTGTTATGGCCTCGATGCGTCTGTTGTCCTGGCATCGTTGAGTTGGGCTCGAACTCTCCTAAGTAGGTCGCTGAGTCAGCCGTGCAGGTGGGCGAAACAACCCCAGCCTTGTTCGCGGCGAGCGGTCCAGTAGCCGAGAACTTGCTGGCCACGTCTCGCAAGCCATAGCCGCAGGTCGATGCGGTCCCAGGGGGATTCAGACCACCCACGCCAGCGCGGATGTGACGTCTGGGAACAGCACTCGCCGAGCCTGGGTAACGCCGCAGATGAAAGTGATATTTTGGTGCAGGCT
# Right flank :  GACGCGACCCCGTCGACTGACGTCGCCCTGATCGCCGTCCATGGCCTCGGCAAGCAGGAAACCGCGCAGCTGCTGCTGGACGATCTCGACCTGCCCGCCGGGCGGCTGCTCGTTCGGCGAGACACCCGCCACCACACCGTCTACCTCGATGAACTCACCCACACCCTGGCAAGCGCGTGGCTGCACGAACGTCGACGGCTGTGGGGCCGAACCACCAACCCGCACCTGCTCGTCAGCCAGGTCACCGCCGCCGATGCGACGCTCCCACCCGTCTCCCACCGAGTCATGGACACCATCTTCGAGCGGCTCGGGCTCACCCCGTCGCAGCTCCGCCGCGACCGCATCCTCGACGAGGCCGCCCATACCGCCGACCCGGTCCACCTCATGCACGTGTTCGGCATCAGCGCCAAGACCGCCATGACCTATGTCCAGGCCGCCCACCCAGAACGCCGCTCGACCGGACCTCGATAACACACGTAGTCCGGCACAATCCGCTGCCA

# Questionable array : NO	 Score: 3.26
# 	Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CCCGCCGCGGTCATTGCCGCGGCGCTTTCGTTGAGGC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [8,2] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-7.90,-9.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [31.7-45.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,1.05   Confidence: MEDIUM] 

# Array family : NA
//