Array 1 51-2091 **** Predicted by CRISPRDetect 2.4 *** >NZ_BFEL01000002.1 Klebsiella pneumoniae strain TUM14378, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 51 29 96.6 32 ................T............ ATTAAATAATTCGTTTACGTCCATGACGAGAT 112 29 100.0 32 ............................. GTAATCCTGATATTGGCGTATCAATGGTCACG 173 29 100.0 32 ............................. TAACCTCGTTTATGTGCGCGTTTTATAGTTGC 234 29 100.0 32 ............................. TGCGGGCCACCAGGGTTGCAGGGTATCAATGG 295 29 100.0 32 ............................. GCCCAGATCGGCTTTTCATCCCGAAGCCGGGC 356 29 100.0 32 ............................. GACACCCGCACGCGCCGGGCAGGCGTGGAACT 417 29 100.0 32 ............................. TCGTCGGGTTTATTGAGTATTCCGCCTGATTT 478 29 100.0 32 ............................. CAGGTCAGCGCAATGTTCCGGGATATCGAGGA 539 29 100.0 32 ............................. ATGACAAAACCAAAATTGAGTTTTGGCTGCAG 600 29 100.0 32 ............................. TTGTCCACTTCACGCCAGTAGTCTTTAGAGAT 661 29 100.0 32 ............................. AATGGAGGTCCGGTTACTGCTGGAAATGTTTA 722 29 100.0 33 ............................. ATCCCCACCACCGGCGCTGGCGAGTAGTACCGC 784 29 100.0 32 ............................. GATTGTCTGACAGATAATGCAGCGCAATGCGC 845 29 100.0 32 ............................. ATGTGAATTTCCTGGCCGGTTGGTAGTTTGAA 906 29 100.0 32 ............................. TACTGAAACGGGTAATCAGCACAAATACCAAA 967 29 100.0 32 ............................. CATCGCTTTATGCCGAAATGAGGATGATAGTG 1028 29 100.0 33 ............................. GAGCTTTCCTCCTCGTATCACTACCGCGCAGAC 1090 29 100.0 32 ............................. ATCAATTCCCTCATTTTTTTTCCTTTAGCTCG 1151 29 100.0 32 ............................. TTCATCTGGTAGCAAACCGCCATCGGGAAGAA 1212 29 100.0 32 ............................. ATTTTTTGGGGCACAATTTGGGGCATTTTTTT 1273 29 96.6 32 A............................ AGGGTTTCGATTTTATCGGGATAGAAATGAAT 1334 29 100.0 32 ............................. TGGCGGACGTTGTACCTGTGAGTTAATTCTTC 1395 29 100.0 32 ............................. ACCGCTCCTCTGACGCCAGGAGGGTGTAGGAG 1456 29 100.0 32 ............................. TCCAGGGGCAAAGAATTGCCCATTATCGTACA 1517 29 100.0 32 ............................. TTTGCAATATCTGCCTGCGCCGCCGCCAACGT 1578 29 100.0 32 ............................. CTCGGATAAAATGCCTTGCATGAGGCGAACGA 1639 29 100.0 32 ............................. GCGTCCAGTTGAACCCGGCACATTCCCGCTGG 1700 29 100.0 32 ............................. TACGCAGCCGGATCCAGGAGCGCATGGACGCT 1761 29 100.0 32 ............................. GCACGATATTCAGCATCATCAGGACGGTTCAT 1822 29 100.0 32 ............................. TCACGCCCAGGGCTTCCTTTGCGTTCCGAAAA 1883 29 96.6 32 ........T.................... CCCCGTCGTCATTCGCGCATTCTGCGCACAGA 1944 29 96.6 32 .....A....................... TGCGTCACGACGCCGGCGACAGTGACATCGTC 2005 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 2063 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 34 29 98.9 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GCCAGCGGGGATAAACCGTAGTCATTTGCCGGTGACGGGAACCCCATAGCG # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //