Array 1 819411-819801 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAFJMJ010000001.1 Amycolatopsis sp. 195334CR 1, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	=============================	=================================	==================
    819411	    29	 100.0	    32	.............................	GCGCCGAACACGAACGCCACCGCGCCCACGAC 	
    819472	    29	  96.6	    32	............................G	TGGGGCGGCACCACGTGGGCCCAGGTCGGCGC 	
    819533	    29	 100.0	    32	.............................	GTCGCGATCACCACGCTCACCATCCGTCGTGA 	
    819594	    29	  89.7	    33	..C...T....A.................	CCGGGTGGCCGCGGAACCACCGAACCTGCGCTT	G [819611]
    819657	    29	  86.2	    25	..C......................CG.A	GGTTGATCTGTCGCTCACTCCTCAA        	CCCC [819679] Deletion [819711]
    819715	    28	  89.7	    32	..C............A.-...........	AGCACGCCCAGCTCGTCGGCCACCAGCAGGAT 	
    819775	    27	  89.7	     0	..C..................--......	|                                	
==========	======	======	======	=============================	=================================	==================
         7	    29	  93.1	    31	GTGGTCCCCGCGCGAGCGGGGGTGGTCCC	                                 	       

# Left flank :   CAACGTCGCAGGAGACACCCCGTTCCCCAGGGAATGGGGATCCTCCGGCATGAAGGCGGGACGCGACTTCTGCGTGCCGCTCTAGCGGAGGAGGGACGCCGATACCGGGCACAGCCCCCTGACCCGCGCCGGTCATCTCGATGTGCTCGCTCCAGAAGCGGGGACGACCCCGGTGCCGAGCCAGGACACGATGTTCTCGAGATGTGTGTGTGCTCCAGCCCGCGGCCCGGATGCGACTCAATGAGCAGGGCCGGGATGCCGGCATCGTCGCGCCGGTCCTCGGCCCAGCCCGGCCCCTTGCCACCGACGAATTAATCATCGATCCACACGAGCGGGCGGTCGCCGATCCACCGCTGGATCGCGCCGGTCTTGGCCGACCAGCCGAACCCGGGCCCACCACAAAGGACCTCGATCACCGGCAGCTCCGGCATACCCAGCCACGGCGTCAAGCTGGCCACCTATAACATCGTTTCGGCTTGTATCGTCGCAGGTCATGAAGT
# Right flank :  CGCGGGCGTCACTGCGCATCCACGTCAGGACCGGCCCCTCAATCGGCACCAGTGTGGCCATCGGCCTCCAGTTTCCGTTCGTTCCCGGTTCCCGGGTTGTGCGGTGGCCGGGTTGGCTGTCAGCGCTGCGCCGGCGGTCAGCATCCTGGTGGGTGGCGCCGGGCTCGGTCTCCGCATTGCTGCGCCTGTTGTCGGACGCTATCGCAGGTGGCGGTGGGCTCGGCGACGCCGTCGTGCTGGTGTCGTCACGCAGCAGGCGGCGATACATCGACAGGTCCCTGCCCATGCCCATGTGCTTCCTTATCCGGTTTGGCTGTCTCGGCCCGGCCCCCCTCGGATCCGGGCCGAGACGTCGAGTCCTGCTCCGGCTCGCCGGCCGTCGGCGGCGGAGCAGGCCCGGGGAAACGGTGGGTCGTGGCACGGACGTCGTGGTCGCCCGGCGGTCGCTCCGCGGTCTCTGGACACGATTGGTGTCGCTGTGCGACGTTCGAACGCGGCCG

# Questionable array : NO	 Score: 5.41
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:-0.05, 8:1, 9:0.56,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGGTCCCCGCGCGAGCGGGGGTGGTCCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [1,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTTCTCCCCGCGCGAGCGGGGGTGGTCCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.80,-12.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-16] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [46.7-30.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.55,0.37   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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