Array 1 147311-144581 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJNAQ010000005.1 Candidatus Nitrosotenuis uzonensis isolate Candidatus Nitrosotenuis uzonensis 5A, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 147310 37 100.0 34 ..................................... ATTGTCATATCAGACCAATTTACAACCGTTTCGG 147239 37 100.0 37 ..................................... TCCGAAAAATTAGTGGGTGTCATTTTTTTACACTCTC 147165 37 100.0 36 ..................................... ACACCTTCGTGTACAAACAAACCCGAATAGGCATAA 147092 37 100.0 36 ..................................... AGGAATTAAAACAACTGCAAAATCCAGAGCAGGTAA 147019 37 100.0 32 ..................................... AGCCCTTGAAGTTCCACGTCTCAGAGTCCTCC 146950 37 100.0 38 ..................................... CTATACACAAAACTTAAGCTGATGCCTAGAACGTAAAA 146875 37 100.0 36 ..................................... ATGATATATTGGTGCTCTCGAACAAGGATGATGCGT 146802 37 100.0 37 ..................................... ATAGATTTCTGTCTTTTCTAGTTCACGAATGTATCTG 146728 37 100.0 39 ..................................... TATTGCAAATGTGAAACCGATCAATGAGACACCGATAGA 146652 37 100.0 36 ..................................... TTCTTGGTACTGCAAGGGAGTAAAAGAGTGAACGCC 146579 37 100.0 35 ..................................... TGTAAAAGCAATGCGTGTTCTAATGCCAACCAACC 146507 37 100.0 37 ..................................... ACTGTTGCCATCCATGCCTCCTCTCCGCTCTTGTCCT 146433 37 100.0 34 ..................................... TCATTGCGTACAGTGATCTCACAGAAGCTGGGTA 146362 37 100.0 36 ..................................... TAGAACATTGTTCTTTTTTCAAAATTTCCCACCGTA 146289 37 100.0 34 ..................................... GCTTCATGCTTTTGTCGTCTCCTCCGCTGGCGCT 146218 37 100.0 35 ..................................... TGTTGTTTCTTAGTGCAATTTCCTGCAGTTTTTGA 146146 37 100.0 35 ..................................... ATTATCTCATTGGAATAGATTTTCTCAAATGACTC 146074 37 100.0 34 ..................................... ATGTTTCCAAGGCAAATCATCTCAAGGACACCGG 146003 37 100.0 34 ..................................... TACAGAGCACGGCATACTTGCACATGATAACATC 145932 37 100.0 35 ..................................... AAAGTACTGAGTCTGGAATTTCTGTGAACTGTGTA 145860 37 100.0 34 ..................................... AATACTCTAAGTGTGGAATCAGGAGTTGACAGCT 145789 37 100.0 35 ..................................... GTGCGAACACGTCCCTTTGCGGGTCCGGTGTCTGG 145717 37 100.0 38 ..................................... TAGCCAGAGAAAATGTACATCGAGCCGGAGTCCTTGAG 145642 37 100.0 35 ..................................... TGGATATCGATTTGCTGGACCGGCTTTTTGCATCT 145570 37 100.0 39 ..................................... AAGGAAACCTTTGGCGAGACGTACTGCGAATAGGAGCCA 145494 37 100.0 36 ..................................... AAACCACTACCGAAGACTAATCCAGACAAGGCATAC 145421 37 100.0 35 ..................................... ATGTCCAGGCGTTGTTTTGCACCTGCGCATACGGA 145349 37 100.0 36 ..................................... CACATTATGTGGGCAGGGACGGCAGGGTACGGCTGT 145276 37 100.0 36 ..................................... TAGAAGGCCTGCACCCGATGATCACCGACCCCTTTA 145203 37 100.0 37 ..................................... TTGCGTTTGTGACCTGCCTTGCCGTGAGCTGCTGGCC 145129 37 100.0 36 ..................................... TGGGAACCCTCTCCGCTCCGCATTCAGGACACTTGA 145056 37 100.0 37 ..................................... TCACCTGCTGCATCTGCGGCCTTACCAGATGATCTCT 144982 37 100.0 36 ..................................... AGATCGCTAGGGTTGCAAAAGAAAAGCGACCTGAAA 144909 37 100.0 35 ..................................... AAATAATTGTCAACTGAGATCTTTTTTGCTACTGT 144837 37 100.0 37 ..................................... AGTGCAAAGCTTACCTCATCTCGTTTTTTTTTAGATC 144763 37 100.0 33 ..................................... AGAGTTCCGCAATGTCCTCCTCCAGACCCTTGA 144693 37 100.0 39 ..................................... ATACAAAAGAGTACAAGATGTGACAGTCTTTGGCTAGCT 144617 37 97.3 0 A.................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 38 37 99.9 36 GTCTGAAAGACTAATCCAACAAAACAAGGATTGAAAC # Left flank : ACATGGATTACGTGGAAGAAAACTGATTGCTCTCAAGCTTTATTCAAGACAACTCCCATTGATTGGAAAAATCGATGAGGTCATAGAACTTGACGATGAAATAGTGATAATCGAACACAAGTTCGCCAATCCAGTTGTTGGCAATACAATCAAAGTGCAGCTTGGATTACTAGCAGTATTGCTGGAAGAAAATCTGAAAAAACCAGTAAGGCGGGCAATAGTCGTCTTTACAAAGGAAAATCGAGTAGAAATACAAGTTAAAATCGATGAAGAATTGAAGAAAATGTCTACAAGTATGTTTAATGATGTTCTATCTGTTATTAACTCTGGAAAAAGTCCAAAATCCAAGTTTGATGGCCGGTGCCTGAACTGTTGCTATAGAAAGGTCTGTCCTGTCGGATCCTTAAAAATAAGCGAATAAACTCGCAATACCTGTCAATCTTATCTGGAAAATCATAAATTAACTGCATTTCGAACCTAAATCTGATGAAAAAATCGCG # Right flank : CTTGGTTATGGTCTTTCCAGTAGATCTTCCCCCTCGGATTATAAAGCTCAAAATTAGGAAATTTTTTTATAAAAATTAAATTTTTATAAAAACTTTGTTCAAATTTGAGCTTTATGATTACGTCTCAAAAACCATGTTAACATCACCAGTTGTGTGATAGTATACGTCCTTGCCGGTTGATTCCTCTCTGGCTATAAGACCCAGTGAAAGGAGCTTTTTAATCAAATAATTAAAGTTCTGAGCAGAAGGCTTGCCAAAATGCTTGTAATCCTTGTTTTGAAATCTTCCTTTTTTAGCCATATTTCCCAATGTTTTTCTGTCCGAATTTGAGAGATTGGCAGCATCGATTTTTTCTTTGGCCATAATTGCTAGCATTTCGATGGCTGTTTTTTCTGGGACTGTTTTTTCAGAAGGGAATTTTGAACGAAACTTCAGGATGAGATCACCGCATCTTTTTAGTATGTACCTTGCTTCTCCCTTTGATACATCATAAAGAATAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAAAGACTAATCCAACAAAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.60,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA //