Array 1 95530-92937 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOPV01000013.1 Nitrosospira sp. Nsp14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================== ================== 95529 28 100.0 33 ............................ TTCTGGCGCACCGATATGCCTAGTAGCTTACGG 95468 28 100.0 33 ............................ TAAGCCCGCTCGAAGAATCGGAGGGTCTGGAAT 95407 28 100.0 33 ............................ TACATCCTTCGTTTTCTTCGTCTGATCGGGCTC 95346 28 100.0 33 ............................ TATAAAGCTCAAGGCCGAAGTGGAGGGTTATCG 95285 28 100.0 33 ............................ CACAGGTTAAGCCTGAGATGAAGGAAAGATTGA 95224 28 100.0 33 ............................ TGAATCGGTTACGGCTGGCGCGATCTTCACCGA 95163 28 100.0 33 ............................ CGAAAGTATGCTACACCGACATCTGAACAGCGA 95102 28 100.0 33 ............................ TAAGTGTTCGCACCGCTGGCCAGGGTTGCGGCA 95041 28 100.0 33 ............................ CCCTTATCGGATTGAAGCGGCAAGCGTACGGCC 94980 28 100.0 33 ............................ CGCCTCACCGCGCCTCAAGGGGCGGACAATCTG 94919 28 100.0 33 ............................ TTCGCCCTACCTTAGCTCAGCGGACATAGTTGA 94858 28 100.0 33 ............................ TGCCACAGCGTTATCCCGCCCGTAAGCTACAAG 94797 28 100.0 33 ............................ CTTCCCGACCTTGACCGTGAAGCCCAGATACGG 94736 28 100.0 33 ............................ CAGTTCTGCATCAGGTGACGCCGACGTTGATTG 94675 28 100.0 33 ............................ CAAAGTACATGGCGAGCGGTGACGCGGTAACGA 94614 28 100.0 33 ............................ CATCAGTGGAAGGCAGAGGATCGCGAGAAAGCG 94553 28 100.0 33 ............................ TATTGTCTGTGGCGGTCACGTTAACCGGCACTA 94492 28 100.0 33 ............................ TCAGATCCAGCGTGTCATACAGGCACGAGCGCA 94431 28 100.0 33 ............................ TAGGCGCCGTTCGCGGATATGGCCCCAACGCAC 94370 28 100.0 33 ............................ TCATCGAGCTTTCCGTGTCCCATGTCGGTAAAC 94309 28 100.0 33 ............................ CAGCCCGCCGCATTGCCTTCGTACTGGCATCGG 94248 28 100.0 33 ............................ TGCTCCGTGATGAGATTGGTGGTGCTGCTGTGG 94187 28 100.0 33 ............................ CTACTACAAGGACCGGAGTGTAGTTATAGAAAG 94126 28 100.0 33 ............................ TAAATATGGATGGATGCAAGGCGGCGTTTCCGG 94065 28 100.0 33 ............................ CCTATTAGCCAACGCAGCCGATTCGTTCTATGC 94004 28 100.0 33 ............................ TACGCTTGTACCAATCTTTAATCTCTTTAAGGC 93943 28 100.0 33 ............................ TCCGGTAAAGCATCACGGTGCCCATTTCACCGG 93882 28 100.0 33 ............................ TGGCTTCGCAGATATGGATGACGATATACCATT 93821 28 100.0 33 ............................ CCGATCCGGACTCTTTTTACGCAGTCGACGTTG 93760 28 100.0 33 ............................ CTAGGGTATGTCCAAAAGTATGTCCAAAAGTAT 93699 28 100.0 33 ............................ TGATGGGGTGGATAACGACCCTGAGACTGGTGT 93638 28 100.0 33 ............................ TTGGTATCAATGGGATCGTGACGAGCTGGACGG 93577 28 100.0 33 ............................ CAATGCTGGCGTGGGATCATGGATATGATGTCG 93516 28 100.0 33 ............................ CTACATCAACGCGTGGCATCTGCCGAACATTCG 93455 28 100.0 34 ............................ TTTTGTTCCAAGTGGTGGCTCCCAGTCCGCCGGG 93393 28 100.0 33 ............................ TGAAGTAACCCATCGCAAGAAGCACCGCGCTCC 93332 28 100.0 33 ............................ CCGACGAGCGACCCCGATACCACTACTTGGGAT 93271 28 100.0 33 ............................ CAAAGCCCGGTCGATACCGCCACGCTCGCTTCA 93210 28 100.0 33 ............................ TCATGCTTATTGGGATGCTTTGGGCAAGGTCTG 93149 28 100.0 33 ............................ CATAGAACAATCTGGGCTGTCTCCACGCACACT 93088 28 100.0 33 ............................ CCTATATGACAGGTCTCTGGGGTGATGACTTGA 93027 28 100.0 35 ............................ CTGAACTGCGATGAGCGAAGCGCGGATTTACCGGG 92964 28 89.3 0 ...........AC.T............. | ========== ====== ====== ====== ============================ =================================== ================== 43 28 99.8 33 GTCTTCCCCACGTCCGTGGGGGTGTTTC # Left flank : AGGAGTGAAAAATGCTCGTAGTGATTGCCAATGATCTGCCGCCTGCCGTGCGCGGGCGAATGAAGCTCTGGTTTATCGAACCGCGCCCCAATGTATTCGTTTCCGGCGTCAAGGACGCTGTTGCGAGGAAAGTAGTGGACTATCTGCACGATCACTGCCCGCGCGAAAGCGGCCTGATGATTTTCCGCCGGATTCCGGAAACGCCGGGTTATGAGATTCGCGGCATCGGCGATACCCGGCGCGATCTCATCGAGATTTCCGGCTTGCAATTGGTGATCGAGAAACAAATATTGTTCGGGCCCTTGGCCTGATCCCTTCGGGATATATTTCTCCCGCCTGTGTCGTCGTCGTAAATTGACTAAACATTATGAGAAATACCCTGCTGCTTCGCGGGCGGGGTTCCTTATTTTGTAGCGTTTAAGTCCGGGCCGTCTCGGACGGCTCGATTACTGAAACACAACCCATAGTGTTATAGTAACGTTCCTTAACAATTTGTTGGT # Right flank : TCAATGTGAGGCAATCGTCAGCTCACGAAACGGAATTTAAAGCACGTTAACGTCTTACAAGTTATTGATGGGAATAATGTTCCAAGAATTCAAAATCATCTCAAAAATCAATGCTCATGCGCTTTGGTAAGTCCTTGATTTATTAATTCACTTCACTGGGGTACAATTTTTCCGTTTTGCGAACTGACTCCTTTAGTACCCCAAGAATTAAGTGGCGGGTTTGGCAGCTGTGTGCATGTTACCCCTACTTGCAGGTGCCACTGCATGAGATTATACGTTCCGCGCAGGTGATTTCGTCAAAACGTGCGGCATCGCGGAATTCCAGGTTACCGCCAGAGAGCATTGCGGGAGCGTTGTTGCAGACTTGTGTACTGGCCACGGGCACAGGTTCCCGAAACCAGTGTACATCCGTGCAGCCAGGGTTACCGTGGCCCACTCGGAGAAGTAGGGTGTAGGTTGTACACCTCAAGCCCCGATGCTGCACAGTTCCTTCGGCATTC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGTCCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //