Array 1 2310941-2307002 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP065887.1 Acinetobacter baumannii strain FDAARGOS_917 chromosome 1 Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================== ================== 2310940 29 96.6 31 ............................G TAACGCTGGTACTCTGTACGTTCTACGTTAA 2310880 29 100.0 31 ............................. TCAAGAGAAGTTTTATAGTGTTCGTGTATCT 2310820 29 100.0 31 ............................. TTCACTGGATTACGTTCTAAGCCTTCCTGAA 2310760 29 100.0 31 ............................. ATAAGCCTTATGAGGTAGATACTTCAAAAAT 2310700 29 100.0 31 ............................. ACTCGGTCACAAGGCGTAGTCTACGGTTTTT 2310640 29 96.6 31 ............................G TATCGATACGCCAATGAAGCTATCAGAGTTC 2310580 29 96.6 31 ............................T CAATTGGAACGATATCAGGCTAATAACTACG 2310520 29 96.6 31 ............................G GTACAAGCCATCACATGTATCTGCTAGTTCA 2310460 29 100.0 23 ............................. ACACATGCCAGATGGTTCAAATG Deletion [2310409] 2310408 29 96.6 31 ............................G TATCGATACGCCAATGAAGCTATCAGAGTTC 2310348 29 100.0 31 ............................. GTAGGAAGCTCTACATCTAGTTTTAAATAGG 2310288 29 96.6 31 ............................T ATGAGTGAGGGAGTAGCAAATGTCTGAACAA 2310228 29 100.0 31 ............................. AGAAAGCTGAGCAATTGCCTGCTTTGCCTAT 2310168 29 100.0 31 ............................. ATCCCATTAAAGAAATCATTTTGGTCTTGGA 2310108 29 100.0 31 ............................. AGATCAGAGGCACCAAGCAATGCAGACTCCC 2310048 29 96.6 31 ............................T TTACCCTTGCCATGCTTGCCAGAATTAGAAT 2309988 29 96.6 31 ............................T ACCACCCATTGAACGTTAGCCATATGAGCAA 2309928 29 96.6 31 ............................T TCCATGCTTCACATAGAAATTCATTGCAAGT 2309868 29 96.6 31 ............................T ACTGCTTCCCAAGTCAGTAAAATGATTGTTA 2309808 29 100.0 31 ............................. CAGTAGTATCATTTCAATCGAGTAACGTTGA 2309748 29 100.0 31 ............................. AAAAGACCCAAAGAAATTCGCTCGTTTCTTT 2309688 29 96.6 31 ............................T ACACGGCGATCTTGTTTAATAGTCTGAGTTT 2309628 29 96.6 31 ............................C AATACAAACATTTGACTGCACATCTGGAACA 2309568 29 96.6 31 ............................T AGAAAGCTTGGAAAACAAAGGTGACTGTAAT 2309508 29 100.0 31 ............................. GAAACATCTGTTATTTTTATTGATGAGGTAC 2309448 29 100.0 31 ............................. CCCTTTGGATTGAAGACTCTGCTTTTGCTGC 2309388 29 100.0 31 ............................. TTCACCAGCCTCGGCTAGACTTGATGCTCCT 2309328 29 100.0 31 ............................. AGCAAAATTCAAAAGAATTACCCCAGCCAAG 2309268 29 96.6 31 ............................T TGGTGTGCCTGCGCCCACTCAAGCCATGATT 2309208 29 96.6 31 ............................T TTAACCGAGATCAAGAAGTAATTGCTTGGGC 2309148 29 96.6 31 ............................T ACAATACGACGTGATAATGCAACTAAAGCCC 2309088 29 100.0 31 ............................. CGGTAAAATTAAGTTACCTGCTAAACTTGTG 2309028 29 100.0 31 ............................. ATCAAAGCCTTAATCGCTAAATCAACTGCTA 2308968 29 93.1 31 .............C..............T TTTGTTTATACGGTTAATAAATCAGTACAAT 2308908 29 100.0 31 ............................. TTACACAGGCATGGCAATGAAAGTGTTCTTT 2308848 29 96.6 31 ............................C CTCGTGGAAAAACTTAAAAGCCATCTTCGTA 2308788 29 96.6 31 ............................T TCATCTAAATGTTTTTGACGTTCAGCTTCAG 2308728 29 96.6 31 ............................T AGACAGCTCATTTAATCCGGGTGAGAAACAG 2308668 29 96.6 31 ............................T AGATAATGTTGAATGGGTTGAAACTACCTAC 2308608 29 100.0 31 ............................. GTTCAGCATTCCCCTTCGGGGTCAACGTCCA 2308548 29 100.0 31 ............................. TTACCCCTCCTTACTTTCTGCTTTAACTTCT 2308488 29 100.0 31 ............................. AAACACCAAGCCATAAAATTAATTACAGCAA 2308428 29 96.6 31 ............................T GTTTTGCTAATTTATCAATATCGATTTTCAC 2308368 29 93.1 31 ...AC........................ CAGGGGTCAAGTTCAGAAGATTTACGTTACA 2308308 29 82.8 31 ...GC.......CC..............G GTATTAGTGCGAATTGGCTTTTAGCCCACGC 2308248 29 89.7 31 ....C.......G...............T TAAATGCTCAACTATTTCTGTAGCTAATGGA 2308188 28 82.8 31 ...GC....T...-..............T TCAAATGATTTAATGAGCTTGTAGCCATTTT 2308129 29 89.7 31 ...GC.......T................ CGTCTTCTAATGATGGACTTTAATCCAATAT 2308069 29 82.8 31 A..GA.......TC............... TCTCACTGAAGATATGACCATCACTTTCTTC 2308009 29 82.8 31 ..CGC.......CC............... AGCCATTTACTTTGATAAAGCGTCACATAGC 2307949 29 96.6 31 ............................T AGGAAATTCTATCGGCCCAGCATCTACAAAT 2307889 29 100.0 31 ............................. AGAGACACATCGTTAATAATCTCTTGTGCGG 2307829 29 100.0 31 ............................. TGAGCAAATTATCAATTGATCTATCTGCAAG 2307769 29 89.7 31 ............CC..............T AGACGGTGTTACCTGTAGGCGGTGTCTACTG 2307709 29 89.7 31 ...TC.......C................ TCGTTTGAATAATATGGACAATCCAGCCAAT 2307649 29 86.2 31 ....G.......TC..............G CAGCATCAAACGAGATATTGGCTAACATATT 2307589 29 79.3 31 ...G......A.CC...........C..C AAATAGTTTTAGCTATCTGAGCATTTAATTT 2307529 29 89.7 31 ....G.......C...............T TCATCACGTAGCCTTTTACACGCATCTTGCG 2307469 29 93.1 50 ....................C.......T GTACGCTGAGTATTGATATTGACATTCAGGGCATTCAGAATTTGGCGCTC 2307390 29 89.7 30 ....G........C..............C CAGTTTGCTGAAAATCACCAATACGGTCTT G [2307364] 2307330 29 79.3 31 ...TC......TCC..............G ATTCTATGAGCGTGACCATGACTCTATTTAA 2307270 29 89.7 31 ...GC.......C................ TTATCCAGATAAAACCATATCTACAAAGTGG 2307210 29 93.1 31 ....G.......................G ATCATCTACAGTGATTGAATAAACGGTTTTT 2307150 29 82.8 31 ...GC......TG...............C AACGACGACGCCGTGTGTTTGTTATCGGAAG 2307090 29 79.3 31 ...GC....T..TC..............C AAGTAGGATTTGCAGCCCCAATAGTCTTTAT 2307030 29 75.9 0 ....G....T...C.A........AT..T | ========== ====== ====== ====== ============================= ================================================== ================== 66 29 94.5 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : ACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAATTTATTCGTGATGAAGGAAAAAACTCTCAAGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGAATGGGAATTAGTTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCGGACCTAGTTAAAGATGCTTTTGTTATGCCAGTCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACATTTAACCCAAATACCTTATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTGAATCTTAAAAAGAAAAAACCCCGAAACTTACGTTTCAGGGCTTTTTCGAATCTTGGTGGGATGGCGTCAATTGAACTGATAAAACAAATAATTGTTTTTTAAAGTTAATTTCAATTCAAAAAATAACAGTGTACACAATAGTGTACAAATTATTTGTTACTAGGGCATTTCTCTGAGTTTAGTTGTCATGCTGGGTGACGAACTCAGGAGTTAAAAACACTCCTTTTAGTGGATCGGATTATGAGGCTCGTTATTTGGCTTCAATAAATTTATTGAGCGCAAAACCATATTTGGTGATTGGATTTTAAATCTTGAATTAACTTAGCCGTTCAAGTGGCTGATTAAGTAGCTTGGTCGCGTTTTAAGTGTGAGCAAGTTATAAAAATCACGAAATACTTTCGATTGCAGATACGTGCATCCAGTCGCGTGTACATTGCCGAAGTTGAGGATTTAGATGGTGGGGGGTATCCCTATGTTCAGGTTATTTGCAGAAGTAA # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.00, 8:1, 9:0.52, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [50-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //