Array 1 9156-8467 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFHXY010000012.1 Klebsiella oxytoca strain Survcare179 NODE_12_length_211796_cov_18.5118, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 9155 28 100.0 32 ............................ TGCTGGCGACGGCGCTCATCCTCCCGGATATC 9095 28 100.0 32 ............................ AAGCGGCAGAGGGAGTCTGATTGATGGAAATC 9035 28 100.0 32 ............................ TGCTGCGGCTGGCTTTCACGACGGCCGCCCAG 8975 28 100.0 33 ............................ ATCGAAAGATGACGACTTTTACAATTAGACCAT 8914 28 100.0 32 ............................ GTAATATGGCTCGTTGAGCGCAAAGGGGCTGG 8854 28 100.0 32 ............................ TTTACCGGCGCGCACCCAATCTGACGATGAAC 8794 28 100.0 32 ............................ AGTCAGCCCGGCCACGCGCAAGAGCTGCACGA 8734 28 100.0 32 ............................ GAAGAAGAGCACGCGCAGGAAGCCCGCGATGT 8674 28 100.0 32 ............................ ATGATGCACTCATCCTGGTGACGCCCGCAGTG 8614 28 100.0 32 ............................ TGAAGGCGGTGCAGCTGCGGCTCGATCAGAAC 8554 28 100.0 32 ............................ TAGCGCAACAATCACTGCGGGCGGCGGTGGAA 8494 28 92.9 0 .........................TG. | ========== ====== ====== ====== ============================ ================================= ================== 12 28 99.4 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TAAAAGGATGGCGTTGCGTCAGTCGGGTACAGGTAAAAAGCAGCCCCGAGCGGCTGATGCGCCGCTCGGTGAGAAAAGGCTGGCTGACGCAGGATGAAGCAAATGAGCGATTGCTTAGCATGCGGGGAGAGTCGACAGCGCTCCCCTGGTTGAATATGAAAAGCCTCTCAAATGCGCAGAAGTTTCCGCTATTTATTTGTCACGGTGAGCTGCTGGCGCAGCGCGTCGCGGGAACATTCAATAGCTATGGGCTGAGCCATATCGCGACTATCCCCTGGTTTTAGCATGTTGGTGAGAGTTTTTGACGAGTGCTAAAACAAACCATAACCGGCGCGGTCTTTCGCGCCGATTTTTCAAGCGCTAATTAAAACCCTTTTTTATGATGAATCTCTATCTTATTGATTTTAGATAGTGATTTTATAAAGGTCGGAAAAAGGGTTGTGAAGAGGGGAAGGCGTTTTTTGGCTTTTTTATCAGATGCTTGTAGTGGTTAGGCTTCA # Right flank : TCGTGGCGGTTATGGGCGCAGAGACAGGGCCGTCAAAGCCGAAGAGGGAAGCGGCGTGAGAATAAAAGAAATGAAAAGACCGGGAATTATCCCGGCCTTCAGCATCTGGCGCGTTACGCGCGAAAACGATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGCTCAACAGTCACTTTGTCGCCCGTCAGAATGCGGATGTAGTTTTTACGCATTTTACCGGAAATATGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGGAACATAGTGTTAGGCAGCGTATCAAGTACGGTGCCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAGTCCTCTGGGGTATCACTACCGTAGTTTTGAACCGGCAAGATAATGCCGAAGTTCAGCAAGTATGTAAAGTTTTACGTCAAATCGCCGAAGTAGTTTTGGCGCATTGCCCGTAATTCACGCGGATAAACCGGGCGACAGGCGCAAACGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 18093-17584 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFHXY010000012.1 Klebsiella oxytoca strain Survcare179 NODE_12_length_211796_cov_18.5118, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 18092 28 100.0 32 ............................ CAGTGAACGCGGCGAACGAGCTCGACAAAGCG 18032 28 100.0 32 ............................ GGACGCGGCACACTGGCAGGGTGCGGCAGCAT 17972 28 100.0 32 ............................ GAATGGCCAGACCATCCCGGCAACAGCTTACC 17912 28 100.0 32 ............................ TCGAGCTGACCGGCGACCCCATCATTTTGAGC 17852 28 100.0 32 ............................ AGATAACCCTGCAATCCTGCACACTGGCAACC 17792 28 100.0 32 ............................ TGATACCAATTATTGCGTTTATAGCAAAAATA 17732 28 96.4 32 ............G............... CTTACGAGATGCTTTCTATCTCACTAGCAATA 17672 28 96.4 33 ............G............... AACCTCCCATGCGGCACCATCTTCCGTATGCAA 17611 28 92.9 0 ....T.C..................... | ========== ====== ====== ====== ============================ ================================= ================== 9 28 98.4 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GGTTATCCACCAGGTGGTGGATAAGTTTATCGTTGAGCTGCAGGTCCAGCTGGATCAGAAAGGCGTCTCTTTGGAAGTAAGCCAGGAAGCCCGCGATTGGCTGGCCGAGAAAGGCTACGACCGGGCCATGGGCGCGCGTCCGATGGCGAGGGTGATTCAGGACAACCTGAAAAAACCGCTGGCCAACGAGCTGCTGTTTGGCTCACTGGTTGACGGTGGTCAGGTGATCGTTGAGCTGGACAAAGAGAAAAACGCGCTGACCTACGCCTTCCAGAGTGCGCAAAAGCACAAACCGGAAGCGGCACATTAAGTCGCTTGCGTGAAACGTCAAACCGGCCTCAGGGCCGGTTTTTTTATGCCGATGTCCTGGACCCTTTTTTATTCCGCTTTTGTAAGCTATTGATTTGATTAAAGTGAAAATCTGGCGTGAAATTATGGTAGCAGAGAGGGGCTGTTGATTAATTTCAATGATAACAATATGGTAGGGTGTCGTTCGTTCA # Right flank : AGAGCTTGCCCATACTGCGGTGCAGGCTAAAACGATTCTAAAGAACTTGCCAAAATAATAGGCTATTTTGCAATTTGCGATGAATGTCAACGTATTACCTCTAATATACTGTTTTTATAAACAGCTATCGACACTGAGCCACAGGATGTGACTATGCCCGCGAACTATATTGCCCCGTCGGATTTAAAAACGATTCTCCATTCGAAGCGCGCCAATATTTATTATCTGGAAAAGTGTCGGGTTCAAGTCAACGGCGGCCGCGTGGAATATGTTACGAGCGAGGGAAAAGAGTCATTTTACTGGAATATCCCAATAGCAAATACAACGGCTATTATGTTGGGAATGGGAACCTCCGTTAGCCAGGCTGCAATGCGTGAGTTTGCCCGAGCGGGCGTAATGGTCGGTTTTTGCGGTACGGATGGCACGCCTCTTTATGTCGCTAATGAAGTCGATATTGACGTTTCCTGGCTGTCCCCGCAAAGCGAATATCGACCAACTGA # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 32400-31351 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFHXY010000012.1 Klebsiella oxytoca strain Survcare179 NODE_12_length_211796_cov_18.5118, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 32399 28 100.0 32 ............................ AGATGCGTTCATGGGCCTGGCGCCGCGTTTTA 32339 28 100.0 32 ............................ AGGCTCTTAAAATGCGGGATCTTTTCATCAAC 32279 28 100.0 32 ............................ AGATTGAGGTCGACGGCCCGGAAATGCTCATT 32219 28 100.0 33 ............................ AATCCCGCAACCCCGGAGGCTGGTCAATGGCCG 32158 28 100.0 32 ............................ TGCAGCCCGAATGCGTTAGCTGTGCGAATATC 32098 28 100.0 32 ............................ GCGTTCTATGGCTGCGCGAGCCTGCAGACGAT 32038 28 100.0 32 ............................ TTGAACGTTTCGCCGCGGCAATGGAATCCGTC 31978 28 100.0 32 ............................ TCTTGAGGCTGGCGGTACCGCAGGTACGGCAC 31918 28 100.0 32 ............................ CAAGCCCCGTACCCTCATCAATGCCAAAATAG 31858 28 100.0 32 ............................ GTGCTGGTCAGCGGCAACACGATAACGCTCAT 31798 28 100.0 32 ............................ ACAACGGCGCCCACACTGGCGGGATTGTCTAC 31738 28 100.0 32 ............................ ACGTCTTTAACGTTGGAAACGGTCAGCGGCTT 31678 28 100.0 32 ............................ AGAAAGAGCAGTCCGCTCTGCTCATTACTCTG 31618 28 100.0 32 ............................ TGCCGTCCAGCCTGCTGAAAACACCGGCAACC 31558 28 100.0 32 ............................ GCTAATACAGGTCAAATCGCGGTTAATGCTCG 31498 28 100.0 32 ............................ AAATCACGATGCCTACACCGGCAGCGATCCAG 31438 28 100.0 32 ............................ GGATGACCGATAGCATCGGCATTTTTGAATTG 31378 28 82.1 0 ............T.C.....T.C..T.. | ========== ====== ====== ====== ============================ ================================= ================== 18 28 99.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TCAGCAGCATGCTGGTAGCGAAAGGTCTGCCGGGCTTTATCGCTTATGGGGTTTTAGCTGGAGAAGTGGTTGCGCCATGTCTGCTGATTGTGGGGATCCTGACGCGCCCCGCGGCGCTGGTGCTGGCATTCACGATGGTTGTGGCCTGGCTGATGGTCGGGACGGGTAAAACCTTCGCGCTGGATGCGGTAGGCGCGTGGGCGATTGAGAGTCTGGTCTACTTCTTTGTTGGCGCGCTGGCGATTGCCTTCCTCGGGGCAGGGCGCTATTCCATTGGTGGAAACTCGGCCTGGCGCTAAGTGCACCAGGGTTTTCTGCCTCACCCTGGCCACATCCTGTTTGCCGGGGTGTCGCCGCTCGTTTTTCAGACCCTTTTTTTTGGGGGGTATTTTAAGATATTGATTTTTTAATATTTTTATTGTTGTCACAAAAAAAAGGGTAAAAGGGCCTTTTATTGATTATTGCATGATAAAACAATAAGGCAGGTGCGCCGGGCTAGT # Right flank : GAGCCATGCTACCCGACGATTACCGCGTAGCATGGCCAGCAACAACATTAAGCCAGTACCAAATCTCCCTGCGGCTGGCAGGAGCAGGCCAGCACGTAGCCTTCAGCGATTTCCGCATCGGTTAACGTCATGGTGCTGCTGACGGTATATTCACCGGAAACCACTTTCGTTTTGCAGCAGCCGCAAACGCCCGCGCGGCAGGCGACGGTAACCGGCACCTTATTGCTTTCCAGCGCTTCGAGCAGCGTGGTGCCGACCGGGGCATAAAACGTTTTCGCCGGCTGCAGTTTGGTGAACTTCAGACCGCTGGTGGCCGCGACGGCGACTGGCGTAAAGAACTGCTCTTTAAAGAAGCGCGTCGCGCCCAGCGCTTTCACTTCCTGCTCGACGAGATCCATATACGGCGTCGGACCGCAGGTCATCACGGTGCGCGATGCCAGATCCGGCACGCTTTGCAGTAGTTCAGTCGTTAAACGTCCTGCCACGAAACCGTGGGTAGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //