Array 1 92018-91377 **** Predicted by CRISPRDetect 2.4 *** >NZ_WHJJ01000013.1 Acetobacter senegalensis strain A3 IACGLJIM_13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 92017 29 100.0 32 ............................. GTCAACGATCCTTGATACCGGCGCATTAACCC 91956 29 100.0 32 ............................. CTGCGAGGCTTTCGGCCTGGCGGGATGTATGT 91895 29 100.0 32 ............................. TTTTACACATCGAAACAGGCTTTGCGGCGCAC 91834 29 100.0 32 ............................. GATTGGTCTGGCGTTACTCATGCCGTGACGTT 91773 29 100.0 32 ............................. CCGCAGCACGCTGACGGCATATGAAGGGGGTC 91712 29 100.0 32 ............................. ATCGGTGGACGGATACAGCGTGCCGCCGTTAT 91651 29 100.0 32 ............................. AACCATACTATCGGCGCTGTTTATACCGAGTG 91590 29 100.0 32 ............................. CTTATCGAAGTCATAATAGCCGCCAGAACGGT 91529 29 100.0 32 ............................. AGGACTGAGCCAGATGAATGGGCCCGTGAAAA 91468 29 100.0 32 ............................. GTGTCAGGGCGAAAGGCGTCGCTGCGCTGCCT 91407 29 93.1 0 ...........................GT | C,C [91385,91387] ========== ====== ====== ====== ============================= ================================ ================== 11 29 99.4 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : GATGTGCTGGCCGCGGGTGGAACTGAGCCACCGTCTGTGCAGAAGGAAGCGATGCCCGTCGCGTTTGCTGATCCGAAGGGGTTAGGTGATGCTGGTCATCGTGGTTGAAAATGCACCTCCGCGGTTACGCGGGCGGCTGGCTGTGTGGCTTCTGGAAGTGCGAGCTGGTGTCTATATTGGCAGCTACGGGCGGCGAGTGCGGGAAATGATATGGGGGCAAGTTTGTGCCTATATTGAAGACGGCAATGCTGTGATCGCCTGGGCGGCTCCAAATGACGCCGGGTTTGAATTTGATACTTGCGGAAAGAACCGTCGGGTGCCGGTGGATCTTGACGGCTTGCGGTTGGTTGCCTTTGGCTGTGAAGCCGCTCTTCCGATGCAACCAGGGCCTGCAGCAATGACCCTTCCAAGGCGACGTGGAAGGGGATAAAAACTGTCATAAGGCTGGTAGATTCTTTGACATAAAAATAATGCTTTAAGATCAAGTGGTTCCACAAAGA # Right flank : CTATCCCTCATCCTCCGAACTGTCATAGGAATGCCAGTTCCTCATCTCCCTGTCCCGATCATCGCAGACGATCCGTTCGTTGCTCATGGCGAGCAAGGACGTTCGGGCAGTACCTTGACCACATAAATTCGTCGAAGGTCGTTTTCCTCGGCGTGATGCGTCTCAGTATATCCGATGCGCTGATAGAGGGAGAGGTTTTCAGTCATGGCTTCATTGGTATAGAGCTTGATGTGACTGAAACCCGCCTTGGAGGCGGTGTTTTCCGCAAACTCCAGCAGTCTTCTCCCTATACCCAATCTCTGCGCAGCGGGGGCGACCGCCACGTTGTCGAGAAGCATGGCATCGGCCTCCGGGATCACGATAAGGATGCCGTGAATCGTTCCATCATGAAGGGCAACGTGAACGCGCCCGCTGTGGATCAGGGAAGCATAATTGTCCAGCATCGGACCCGGTTTTGCAGCCAATACGAAAGACGTAGTGACTATAGGCATGCCGCCCGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 102211-101388 **** Predicted by CRISPRDetect 2.4 *** >NZ_WHJJ01000013.1 Acetobacter senegalensis strain A3 IACGLJIM_13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 102210 29 100.0 32 ............................. GAGCCGCCAGCAGGGACTGCAAGGGGAGCCGT 102149 29 100.0 32 ............................. CCAAAAGATACTGTTGAGATTGATGGGAACAG 102088 29 100.0 32 ............................. ACGGATCACCTCTGACTTGACGGAATTTGGTG 102027 29 100.0 32 ............................. GTTCAGTGGCTCCCGCTGGATATGTTCGCCAA 101966 29 100.0 32 ............................. CCAGCAATCAGCTAACAGATTACGTTCCGCCT 101905 29 100.0 32 ............................. GCCGGGAACGGTGGGAAGATAGCGGCGCAGTG 101844 29 100.0 32 ............................. GTCAGCAATGCGAGAGAACGCGCTGGCTGCAT 101783 29 100.0 33 ............................. CGCGCCCGCTGTCAGAATCTGGCGGCTGACAGG 101721 29 100.0 32 ............................. TCTTGCAAAAAATTGTCGGTGGCAGTCGGCAG 101660 29 100.0 32 ............................. CGCGTGGCAACGCCATCATCATTACAAAACAG 101599 29 100.0 32 ............................. TGGCATGGATACAGGCGCAACGGTCTGGAATA 101538 29 100.0 32 ............................. TCACAAAGCGTTCTTGAAATTGTCCCTTAGCA 101477 29 100.0 32 ............................. GTTCGGGCGTTTACCACCCCTTGAGGGAAAAA 101416 29 96.6 0 .......................A..... | ========== ====== ====== ====== ============================= ================================= ================== 14 29 99.8 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : GATTTCCTGAAAGGCCGCGAAGCTGCACCGCCGCAGCAGGTGTAATTCCTCAGATTCTGGATGTCCGTCTCTCTGCATTTTCTAGGTGATGCTGGTCATCGTGGTTGAAAATGCGCCTCCGCGGTTACGCGGGCGGCTGGCTGTGTGGCTTCTGGAAGTGCGAGCTGGTGTCTATATTGGCAGCTACGGGCGGCGAGTGCGGGAAATGATATGGGGGCAAGTTTGTGCCTATATTGAAGACGGCAATGCTGTGATCGCCTGGGCTGCTCCAAATGACGCCGGGTTTGAATTTGATACTTGCGGAAAGAACCGTCGGGTGCCGGTGGTTCTTGACGGCTTGCGGTTGGTTGCCTTTGGCTGTGAAGCCGCTCTTCCGATGCAACCAGGGCCTGCAGCAATGACCCTTCCAAGGCGACGTGGAAGAGGATAAAAACAGTCATAAGGCTGGTAGATTCTTTGACATAAAAATAATGCTTTAAGATCAAGTAGTTCCACAAAGA # Right flank : CAAGCTCGCCAGCCCCGGGGATATCCGGCATCTCGATGAAGTCCGGATCGTCATTCATGGTCAGCCACACTGGCTATGGCGTGCCGTCGACCATGAAGGCTACATCCTCGACGAAATCCTGCAGACCCGCCGGAACACGAAGGCCGCAAAGGCATCTGCTGACCAGACATCTGAAAACGGCAGGGGCCCGGCCCAAGCGCATGGTCACCGACAAACTGGCCTCCTATGGCGCGGCCAGACGGAAACTGAGCCGGTCTGGCATCTTTCTCACAAGGGATTAAACAAGCGGGCGGAGAACGCTCACCTGCCATTATGAAAGCGCGAGCGGATGATGCAGAGATTTCGCTCCCCCGCAGGCTGCCAGCGTTTCGTCTCCGTCTTCTCCGCTCTTCGCAACATCTTCGTCCCGCCCGCTTCCAGCAACAAAGCCCTGGCCCGGCATAAAAAGGAACGCAACATGCCTGACATGACAGAAGATAACGGGTTAAATTTTTTCTGGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //